Experiment: acetate 17 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25265 and AO353_25270 are separated by 95 nucleotides AO353_25270 and AO353_25275 are separated by 500 nucleotides
AO353_25265: AO353_25265 - chemotaxis protein, at 5,573,111 to 5,574,730
_25265
AO353_25270: AO353_25270 - histidine kinase, at 5,574,826 to 5,575,266
_25270
AO353_25275: AO353_25275 - hypothetical protein, at 5,575,767 to 5,576,426
_25275
Position (kb)
5574
5575
5576 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5574.192 kb on + strand, within AO353_25265 at 5574.193 kb on - strand, within AO353_25265 at 5574.193 kb on - strand, within AO353_25265 at 5574.265 kb on + strand, within AO353_25265 at 5574.265 kb on + strand, within AO353_25265 at 5574.266 kb on - strand, within AO353_25265 at 5574.266 kb on - strand, within AO353_25265 at 5574.266 kb on - strand, within AO353_25265 at 5574.268 kb on - strand, within AO353_25265 at 5574.372 kb on + strand, within AO353_25265 at 5574.372 kb on + strand, within AO353_25265 at 5574.372 kb on + strand, within AO353_25265 at 5574.372 kb on + strand, within AO353_25265 at 5574.373 kb on - strand, within AO353_25265 at 5574.373 kb on - strand, within AO353_25265 at 5574.373 kb on - strand, within AO353_25265 at 5574.373 kb on - strand, within AO353_25265 at 5574.373 kb on - strand, within AO353_25265 at 5574.400 kb on + strand, within AO353_25265 at 5574.400 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.402 kb on + strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.403 kb on - strand, within AO353_25265 at 5574.651 kb on + strand at 5574.651 kb on + strand at 5574.651 kb on + strand at 5574.652 kb on - strand at 5574.652 kb on - strand at 5574.652 kb on - strand at 5574.703 kb on + strand at 5574.703 kb on + strand at 5574.703 kb on + strand at 5574.703 kb on + strand at 5574.703 kb on + strand at 5574.704 kb on - strand at 5574.719 kb on + strand at 5574.720 kb on - strand at 5574.720 kb on - strand at 5574.751 kb on + strand at 5574.751 kb on + strand at 5574.751 kb on + strand at 5574.752 kb on - strand at 5574.788 kb on + strand at 5574.788 kb on + strand at 5574.788 kb on + strand at 5574.789 kb on - strand at 5574.795 kb on - strand at 5574.795 kb on - strand at 5574.795 kb on - strand at 5574.828 kb on - strand at 5574.828 kb on - strand at 5574.842 kb on + strand at 5574.843 kb on - strand at 5574.843 kb on - strand at 5575.117 kb on + strand at 5575.132 kb on + strand, within AO353_25270 at 5575.209 kb on + strand, within AO353_25270 at 5575.209 kb on + strand, within AO353_25270 at 5575.209 kb on + strand, within AO353_25270 at 5575.209 kb on + strand, within AO353_25270 at 5575.209 kb on + strand, within AO353_25270 at 5575.209 kb on + strand, within AO353_25270 at 5575.209 kb on + strand, within AO353_25270 at 5575.210 kb on - strand, within AO353_25270 at 5575.210 kb on - strand, within AO353_25270 at 5575.210 kb on - strand, within AO353_25270 at 5575.210 kb on - strand, within AO353_25270 at 5575.213 kb on + strand, within AO353_25270 at 5575.214 kb on - strand, within AO353_25270 at 5575.214 kb on - strand, within AO353_25270 at 5575.214 kb on - strand, within AO353_25270 at 5575.214 kb on - strand, within AO353_25270 at 5575.214 kb on - strand, within AO353_25270 at 5575.609 kb on + strand at 5575.610 kb on - strand at 5575.611 kb on + strand at 5575.611 kb on + strand at 5575.611 kb on + strand at 5575.612 kb on - strand at 5575.676 kb on + strand at 5575.676 kb on + strand at 5575.676 kb on + strand at 5575.677 kb on - strand at 5575.677 kb on - strand at 5575.677 kb on - strand at 5575.677 kb on - strand at 5575.687 kb on - strand at 5575.696 kb on - strand at 5575.696 kb on - strand at 5576.098 kb on - strand, within AO353_25275 at 5576.098 kb on - strand, within AO353_25275 at 5576.098 kb on - strand, within AO353_25275 at 5576.201 kb on + strand, within AO353_25275 at 5576.202 kb on - strand, within AO353_25275 at 5576.251 kb on - strand, within AO353_25275
Per-strain Table
Position Strand Gene LocusTag Fraction acetate 17 mM remove 5,574,192 + AO353_25265 0.67 +0.6 5,574,193 - AO353_25265 0.67 -0.1 5,574,193 - AO353_25265 0.67 +1.1 5,574,265 + AO353_25265 0.71 -0.4 5,574,265 + AO353_25265 0.71 +0.3 5,574,266 - AO353_25265 0.71 -0.2 5,574,266 - AO353_25265 0.71 -0.2 5,574,266 - AO353_25265 0.71 -0.2 5,574,268 - AO353_25265 0.71 +0.3 5,574,372 + AO353_25265 0.78 +0.6 5,574,372 + AO353_25265 0.78 +0.1 5,574,372 + AO353_25265 0.78 +0.9 5,574,372 + AO353_25265 0.78 -0.7 5,574,373 - AO353_25265 0.78 -0.9 5,574,373 - AO353_25265 0.78 -1.7 5,574,373 - AO353_25265 0.78 -0.9 5,574,373 - AO353_25265 0.78 -0.3 5,574,373 - AO353_25265 0.78 -0.7 5,574,400 + AO353_25265 0.80 -0.7 5,574,400 + AO353_25265 0.80 +1.3 5,574,402 + AO353_25265 0.80 -0.0 5,574,402 + AO353_25265 0.80 -1.0 5,574,402 + AO353_25265 0.80 +0.0 5,574,402 + AO353_25265 0.80 -0.4 5,574,402 + AO353_25265 0.80 +0.6 5,574,402 + AO353_25265 0.80 -0.4 5,574,402 + AO353_25265 0.80 -0.0 5,574,402 + AO353_25265 0.80 +1.1 5,574,402 + AO353_25265 0.80 -1.7 5,574,402 + AO353_25265 0.80 -0.4 5,574,402 + AO353_25265 0.80 +2.6 5,574,402 + AO353_25265 0.80 -0.1 5,574,403 - AO353_25265 0.80 +0.1 5,574,403 - AO353_25265 0.80 +0.1 5,574,403 - AO353_25265 0.80 -0.6 5,574,403 - AO353_25265 0.80 -0.5 5,574,403 - AO353_25265 0.80 +0.6 5,574,403 - AO353_25265 0.80 -0.1 5,574,403 - AO353_25265 0.80 +0.6 5,574,403 - AO353_25265 0.80 +1.4 5,574,403 - AO353_25265 0.80 +0.6 5,574,403 - AO353_25265 0.80 +2.2 5,574,403 - AO353_25265 0.80 +0.4 5,574,403 - AO353_25265 0.80 +2.2 5,574,651 + -1.2 5,574,651 + +1.2 5,574,651 + +0.5 5,574,652 - +0.3 5,574,652 - +0.8 5,574,652 - +0.5 5,574,703 + -0.1 5,574,703 + +1.2 5,574,703 + -0.4 5,574,703 + -0.2 5,574,703 + -1.3 5,574,704 - -0.9 5,574,719 + +1.6 5,574,720 - -0.4 5,574,720 - +0.8 5,574,751 + +1.4 5,574,751 + -1.4 5,574,751 + -0.4 5,574,752 - -1.9 5,574,788 + +0.2 5,574,788 + +1.4 5,574,788 + +1.6 5,574,789 - -0.6 5,574,795 - -0.0 5,574,795 - +0.1 5,574,795 - +2.6 5,574,828 - +2.6 5,574,828 - +1.9 5,574,842 + +0.6 5,574,843 - +0.6 5,574,843 - +0.2 5,575,117 + +1.1 5,575,132 + AO353_25270 0.69 -0.4 5,575,209 + AO353_25270 0.87 +0.2 5,575,209 + AO353_25270 0.87 -1.9 5,575,209 + AO353_25270 0.87 -0.4 5,575,209 + AO353_25270 0.87 +0.4 5,575,209 + AO353_25270 0.87 -0.9 5,575,209 + AO353_25270 0.87 +0.2 5,575,209 + AO353_25270 0.87 -0.4 5,575,210 - AO353_25270 0.87 +1.1 5,575,210 - AO353_25270 0.87 -0.9 5,575,210 - AO353_25270 0.87 +0.2 5,575,210 - AO353_25270 0.87 -2.9 5,575,213 + AO353_25270 0.88 +1.6 5,575,214 - AO353_25270 0.88 +0.6 5,575,214 - AO353_25270 0.88 +0.6 5,575,214 - AO353_25270 0.88 -0.9 5,575,214 - AO353_25270 0.88 +2.0 5,575,214 - AO353_25270 0.88 +1.8 5,575,609 + -1.7 5,575,610 - -0.8 5,575,611 + -0.5 5,575,611 + +0.8 5,575,611 + -0.7 5,575,612 - -0.4 5,575,676 + -0.6 5,575,676 + +1.4 5,575,676 + +0.6 5,575,677 - -0.6 5,575,677 - +0.2 5,575,677 - +0.6 5,575,677 - -0.4 5,575,687 - +1.4 5,575,696 - -1.1 5,575,696 - -0.2 5,576,098 - AO353_25275 0.50 +0.4 5,576,098 - AO353_25275 0.50 -0.1 5,576,098 - AO353_25275 0.50 -1.9 5,576,201 + AO353_25275 0.66 -0.4 5,576,202 - AO353_25275 0.66 -0.8 5,576,251 - AO353_25275 0.73 -0.4
Or see this region's nucleotide sequence