Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3184

Experiment: A22 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.05 mg/ml
3,821,904	+		Shewana3_3182	0.48	-0.9
3,821,904	+		Shewana3_3182	0.48	-0.5
3,821,904	+		Shewana3_3182	0.48	-0.3
3,821,912	-		Shewana3_3182	0.49	+1.5
3,821,912	-		Shewana3_3182	0.49	-0.6
3,821,938	+		Shewana3_3182	0.52	-1.5
3,821,938	+		Shewana3_3182	0.52	-0.5
3,822,042	+		Shewana3_3182	0.63	-0.7
3,822,139	-		Shewana3_3182	0.74	-1.1
3,822,160	+		Shewana3_3182	0.76	-0.9
3,822,265	+		Shewana3_3182	0.87	-0.8
3,822,366	+				-0.1
3,822,374	-				+0.5
3,822,374	-				-0.7
3,822,381	-				-0.5
3,822,382	-				+1.7
3,822,417	+				-0.6
3,822,431	-				+1.1
3,822,434	+				-0.1
3,822,439	+				-0.7
3,822,458	-		Shewana3_3183	0.13	+2.5
3,822,503	-		Shewana3_3183	0.24	+0.0
3,822,763	+				+0.0
3,822,774	+				+2.0
3,822,774	+				-0.1
3,822,925	+		Shewana3_3184	0.18	+0.1
3,822,925	+		Shewana3_3184	0.18	-0.4
3,822,925	+		Shewana3_3184	0.18	+0.8
3,822,933	-		Shewana3_3184	0.19	+0.5
3,822,945	+		Shewana3_3184	0.20	+0.1
3,822,995	+		Shewana3_3184	0.27	-0.0
3,822,995	+		Shewana3_3184	0.27	-0.1
3,822,995	+		Shewana3_3184	0.27	+0.3
3,822,995	+		Shewana3_3184	0.27	+0.2
3,822,995	+		Shewana3_3184	0.27	-0.3
3,822,995	+		Shewana3_3184	0.27	-1.0
3,822,995	+		Shewana3_3184	0.27	-0.5
3,823,003	-		Shewana3_3184	0.29	+0.7
3,823,003	-		Shewana3_3184	0.29	-0.5
3,823,015	-		Shewana3_3184	0.30	+1.5
3,823,055	+		Shewana3_3184	0.36	+1.5
3,823,085	+		Shewana3_3184	0.40	-0.9
3,823,085	+		Shewana3_3184	0.40	-0.1
3,823,321	+		Shewana3_3184	0.73	-0.5
3,823,327	+		Shewana3_3184	0.74	+0.1
3,823,364	+		Shewana3_3184	0.79	+0.2
3,823,508	+				-0.1
3,823,516	-				-0.1
3,823,559	-				+2.5
3,823,602	-				+0.3
3,823,737	-		Shewana3_3185	0.17	+0.2
3,823,737	-		Shewana3_3185	0.17	-0.1
3,823,739	+		Shewana3_3185	0.17	-0.1
3,823,757	-		Shewana3_3185	0.19	-0.1
3,823,789	+		Shewana3_3185	0.21	+0.5
3,823,879	-		Shewana3_3185	0.28	+0.1
3,823,957	-		Shewana3_3185	0.34	+0.2
3,823,968	-		Shewana3_3185	0.35	-0.2
3,824,058	+		Shewana3_3185	0.42	-0.4
3,824,065	-		Shewana3_3185	0.43	-0.2
3,824,102	-		Shewana3_3185	0.46	+0.1
3,824,135	-		Shewana3_3185	0.48	-0.7
3,824,182	-		Shewana3_3185	0.52	+0.2
3,824,322	-		Shewana3_3185	0.63	-0.7
3,824,368	-		Shewana3_3185	0.67	-0.3
3,824,398	+		Shewana3_3185	0.69	-0.6