Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2729

Experiment: A22 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.05 mg/ml
3,258,620	+				+2.3
3,258,621	+				+2.3
3,258,630	+				+1.3
3,258,630	+				+0.3
3,258,638	-				+0.3
3,258,638	-				-1.1
3,258,640	+				+0.3
3,258,640	+				+1.3
3,258,640	+				-0.6
3,258,647	+				-0.9
3,258,647	+				+1.3
3,258,653	-				+0.7
3,258,655	-				+1.3
3,258,667	+				+1.3
3,258,676	-				+1.3
3,258,678	+				-0.3
3,258,755	+		Shewana3_2727	0.13	-0.3
3,258,851	+		Shewana3_2727	0.41	+1.3
3,258,875	-		Shewana3_2727	0.48	+1.3
3,258,908	+		Shewana3_2727	0.58	-0.7
3,258,962	-		Shewana3_2727	0.73	+1.3
3,258,985	-		Shewana3_2727	0.80	+0.3
3,259,016	-		Shewana3_2727	0.89	+1.3
3,259,047	+				+1.3
3,259,047	+				-1.1
3,259,047	+				-1.1
3,259,133	+				+0.4
3,259,133	+				+2.3
3,259,150	+				+0.3
3,259,190	+		Shewana3_2728	0.10	+1.3
3,259,190	+		Shewana3_2728	0.10	-0.2
3,259,190	+		Shewana3_2728	0.10	-0.7
3,259,200	+		Shewana3_2728	0.13	+0.3
3,259,219	-		Shewana3_2728	0.17	+1.3
3,259,219	-		Shewana3_2728	0.17	+1.3
3,259,247	+		Shewana3_2728	0.23	-1.1
3,259,247	+		Shewana3_2728	0.23	+1.3
3,259,255	-		Shewana3_2728	0.25	+1.3
3,259,275	-		Shewana3_2728	0.29	+0.9
3,259,275	-		Shewana3_2728	0.29	+1.3
3,259,391	+		Shewana3_2728	0.55	+1.3
3,259,405	+		Shewana3_2728	0.58	+1.3
3,259,412	-		Shewana3_2728	0.60	+1.3
3,259,428	-		Shewana3_2728	0.63	-1.5
3,259,448	+		Shewana3_2728	0.68	+0.3
3,259,456	-		Shewana3_2728	0.70	+1.3
3,259,460	+		Shewana3_2728	0.70	+0.7
3,259,460	+		Shewana3_2728	0.70	+0.7
3,259,468	-		Shewana3_2728	0.72	+1.3
3,259,579	+				+1.3
3,259,579	+				-0.6
3,259,619	-				+1.3
3,259,644	+				+1.3
3,259,835	-		Shewana3_2729	0.38	-1.7
3,259,925	+		Shewana3_2729	0.53	+1.3
3,259,971	-		Shewana3_2729	0.60	-2.3
3,260,026	-		Shewana3_2729	0.69	-0.7
3,260,148	+		Shewana3_2729	0.90	-0.5
3,260,247	+				+0.5
3,260,255	-				+1.8
3,260,905	-				-0.4