Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2586
Experiment: A22 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,090,700 | + | Shewana3_2585 | 0.61 | +1.2 | |
3,090,925 | - | Shewana3_2585 | 0.71 | -0.6 | |
3,090,931 | - | Shewana3_2585 | 0.71 | -1.7 | |
3,090,949 | + | Shewana3_2585 | 0.72 | -0.8 | |
3,090,968 | - | Shewana3_2585 | 0.73 | +1.2 | |
3,091,049 | + | Shewana3_2585 | 0.76 | +1.2 | |
3,091,050 | - | Shewana3_2585 | 0.76 | -0.6 | |
3,091,057 | - | Shewana3_2585 | 0.77 | +0.2 | |
3,091,222 | - | Shewana3_2585 | 0.84 | -0.1 | |
3,091,398 | + | +0.2 | |||
3,092,160 | + | +1.2 | |||
3,092,186 | - | +1.2 | |||
3,092,204 | + | +0.6 | |||
3,092,325 | + | +0.2 | |||
3,092,797 | - | Shewana3_2587 | 0.21 | +0.2 | |
3,092,891 | + | Shewana3_2587 | 0.29 | +1.2 | |
3,093,127 | + | Shewana3_2587 | 0.49 | +2.4 |
Or see this region's nucleotide sequence