Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2353

Experiment: A22 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.05 mg/ml
2,828,653	+				+1.3
2,828,661	-				+2.3
2,828,661	-				+1.3
2,828,698	-				+0.3
2,828,812	+				+1.3
2,828,822	+				-0.4
2,828,841	-				+1.3
2,828,886	+				+1.3
2,829,088	-				+0.3
2,829,260	+		Shewana3_2352	0.36	+1.3
2,829,311	+		Shewana3_2352	0.45	+1.3
2,829,407	-		Shewana3_2352	0.60	+1.3
2,829,652	+				+1.3
2,829,754	-				+1.3
2,830,249	-		Shewana3_2353	0.26	+1.3
2,830,359	+		Shewana3_2353	0.31	+1.3
2,830,521	+		Shewana3_2353	0.38	+1.3
2,830,521	+		Shewana3_2353	0.38	+1.3
2,830,531	+		Shewana3_2353	0.39	+1.3
2,830,539	-		Shewana3_2353	0.39	+0.3
2,830,539	-		Shewana3_2353	0.39	+1.3
2,830,539	-		Shewana3_2353	0.39	+1.3
2,830,962	-		Shewana3_2353	0.58	+1.3
2,831,074	-		Shewana3_2353	0.63	+0.3
2,831,199	+		Shewana3_2353	0.68	-0.7
2,831,412	-		Shewana3_2353	0.77	+1.3
2,831,476	-		Shewana3_2353	0.80	+1.3
2,831,695	+		Shewana3_2353	0.90	+1.3
2,831,700	+				+0.3
2,831,978	-				-1.0
2,832,062	-				+0.9
2,832,062	-				-1.2
2,832,074	-				+1.3
2,832,238	-		Shewana3_2354	0.11	+1.3
2,832,438	-		Shewana3_2354	0.17	+1.3
2,832,519	+		Shewana3_2354	0.20	+1.3
2,832,549	+		Shewana3_2354	0.21	-0.3
2,832,593	+		Shewana3_2354	0.22	+0.3
2,832,627	+		Shewana3_2354	0.23	+1.3
2,832,750	+		Shewana3_2354	0.27	+1.3
2,832,750	+		Shewana3_2354	0.27	-1.3
2,832,758	-		Shewana3_2354	0.27	+1.3
2,832,824	-		Shewana3_2354	0.30	-0.3