Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1804

Experiment: A22 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.05 mg/ml
2,128,944	-				+0.6
2,129,129	+		Shewana3_1802	0.24	-0.1
2,129,143	+		Shewana3_1802	0.27	-0.3
2,129,143	+		Shewana3_1802	0.27	+1.0
2,129,149	+		Shewana3_1802	0.29	+1.6
2,129,149	+		Shewana3_1802	0.29	+0.3
2,129,359	+		Shewana3_1802	0.88	+1.3
2,129,361	+		Shewana3_1802	0.89	+0.6
2,129,369	-				+1.3
2,129,386	+				+0.7
2,129,483	+				+2.3
2,129,518	+				-0.2
2,129,612	-		Shewana3_1803	0.27	+1.3
2,129,667	-		Shewana3_1803	0.42	+1.3
2,129,696	+		Shewana3_1803	0.50	+1.3
2,129,795	+				+1.3
2,129,811	-		Shewana3_1803	0.82	+1.3
2,129,819	-		Shewana3_1803	0.84	+1.3
2,129,838	-		Shewana3_1803	0.89	+1.3
2,129,838	-		Shewana3_1803	0.89	+1.3
2,129,840	+		Shewana3_1803	0.90	-0.7
2,129,848	-				+0.3
2,129,850	+				+0.3
2,129,894	-				+1.3
2,129,904	+				+1.3
2,129,905	+				-1.2
2,129,971	+		Shewana3_1804	0.10	+1.3
2,130,169	+		Shewana3_1804	0.50	+1.3
2,130,226	+		Shewana3_1804	0.61	+0.3
2,130,249	-		Shewana3_1804	0.65	+0.2
2,130,317	-		Shewana3_1804	0.79	+1.3
2,130,329	+		Shewana3_1804	0.81	+0.7
2,130,329	+		Shewana3_1804	0.81	+0.5
2,130,329	+		Shewana3_1804	0.81	+1.3
2,130,337	-		Shewana3_1804	0.83	-1.0
2,130,337	-		Shewana3_1804	0.83	+1.3
2,130,433	+				-0.1
2,130,441	-				-1.2
2,130,441	-				+1.3
2,130,441	-				+0.3
2,130,450	+				+1.3
2,130,503	-				+0.3
2,130,603	+				+0.3
2,130,603	+				-0.1
2,130,630	-				+0.3
2,130,631	-				+1.3
2,130,748	-				+1.3
2,130,824	+		Shewana3_1805	0.14	-0.5
2,130,932	+		Shewana3_1805	0.38	+0.5
2,131,005	+		Shewana3_1805	0.54	+0.8
2,131,087	+		Shewana3_1805	0.72	+1.2
2,131,094	+		Shewana3_1805	0.74	-0.2
2,131,095	-		Shewana3_1805	0.74	+1.3
2,131,095	-		Shewana3_1805	0.74	-2.9
2,131,136	+		Shewana3_1805	0.83	+0.0
2,131,288	+				-0.2
2,131,299	-		Shewana3_1806	0.11	+1.3