Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CSW01_14150 and CSW01_14155 are separated by 0 nucleotides CSW01_14155 and CSW01_14160 are separated by 102 nucleotides CSW01_14160 and CSW01_14165 are separated by 172 nucleotides
CSW01_14150: CSW01_14150 - hypothetical protein, at 23,394 to 26,651
_14150
CSW01_14155: CSW01_14155 - hypothetical protein, at 26,652 to 27,380
_14155
CSW01_14160: CSW01_14160 - glutathione S-transferase, at 27,483 to 27,884
_14160
CSW01_14165: CSW01_14165 - fucose 4-O-acetylase, at 28,057 to 29,097
_14165
Position (kb) 27
28 Strain fitness (log2 ratio) -2
-1
0
1 at 26.517 kb on + strand at 26.533 kb on + strand at 26.549 kb on - strand at 26.606 kb on + strand at 27.380 kb on + strand at 27.388 kb on - strand at 27.448 kb on - strand at 27.490 kb on + strand at 27.490 kb on + strand at 27.495 kb on + strand at 27.495 kb on + strand at 27.495 kb on + strand at 27.596 kb on - strand, within CSW01_14160 at 27.623 kb on + strand, within CSW01_14160 at 27.623 kb on + strand, within CSW01_14160 at 27.631 kb on - strand, within CSW01_14160 at 27.631 kb on - strand, within CSW01_14160 at 27.693 kb on + strand, within CSW01_14160 at 27.693 kb on - strand, within CSW01_14160 at 27.709 kb on + strand, within CSW01_14160 at 27.740 kb on - strand, within CSW01_14160 at 27.790 kb on + strand, within CSW01_14160 at 27.811 kb on + strand, within CSW01_14160 at 27.828 kb on + strand, within CSW01_14160 at 27.828 kb on + strand, within CSW01_14160 at 27.830 kb on + strand, within CSW01_14160 at 27.863 kb on + strand at 28.004 kb on - strand at 28.145 kb on - strand at 28.198 kb on + strand, within CSW01_14165 at 28.346 kb on + strand, within CSW01_14165 at 28.348 kb on + strand, within CSW01_14165 at 28.354 kb on - strand, within CSW01_14165 at 28.368 kb on + strand, within CSW01_14165 at 28.368 kb on + strand, within CSW01_14165 at 28.375 kb on + strand, within CSW01_14165 at 28.375 kb on + strand, within CSW01_14165 at 28.375 kb on + strand, within CSW01_14165 at 28.375 kb on + strand, within CSW01_14165 at 28.393 kb on + strand, within CSW01_14165 at 28.423 kb on - strand, within CSW01_14165 at 28.455 kb on - strand, within CSW01_14165 at 28.536 kb on - strand, within CSW01_14165 at 28.552 kb on + strand, within CSW01_14165 at 28.575 kb on + strand, within CSW01_14165 at 28.575 kb on + strand, within CSW01_14165 at 28.575 kb on + strand, within CSW01_14165 at 28.576 kb on - strand, within CSW01_14165 at 28.583 kb on - strand, within CSW01_14165 at 28.583 kb on - strand, within CSW01_14165 at 28.583 kb on - strand, within CSW01_14165 at 28.583 kb on - strand, within CSW01_14165 at 28.583 kb on - strand, within CSW01_14165
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 26,517 + +0.2 26,533 + -0.3 26,549 - +0.1 26,606 + -0.2 27,380 + -0.2 27,388 - +0.1 27,448 - -0.4 27,490 + +0.5 27,490 + +0.7 27,495 + +0.0 27,495 + -2.0 27,495 + -0.7 27,596 - CSW01_14160 0.28 -0.4 27,623 + CSW01_14160 0.35 -0.2 27,623 + CSW01_14160 0.35 -0.8 27,631 - CSW01_14160 0.37 -0.2 27,631 - CSW01_14160 0.37 +0.1 27,693 + CSW01_14160 0.52 -0.1 27,693 - CSW01_14160 0.52 +0.4 27,709 + CSW01_14160 0.56 +0.5 27,740 - CSW01_14160 0.64 -0.5 27,790 + CSW01_14160 0.76 -0.5 27,811 + CSW01_14160 0.82 -0.5 27,828 + CSW01_14160 0.86 -1.0 27,828 + CSW01_14160 0.86 -0.3 27,830 + CSW01_14160 0.86 -0.3 27,863 + -0.7 28,004 - -0.3 28,145 - -0.1 28,198 + CSW01_14165 0.14 +0.1 28,346 + CSW01_14165 0.28 +0.1 28,348 + CSW01_14165 0.28 -2.1 28,354 - CSW01_14165 0.29 -0.4 28,368 + CSW01_14165 0.30 +0.1 28,368 + CSW01_14165 0.30 +0.3 28,375 + CSW01_14165 0.31 -0.2 28,375 + CSW01_14165 0.31 +0.1 28,375 + CSW01_14165 0.31 +0.7 28,375 + CSW01_14165 0.31 +0.3 28,393 + CSW01_14165 0.32 +0.3 28,423 - CSW01_14165 0.35 +0.1 28,455 - CSW01_14165 0.38 -0.7 28,536 - CSW01_14165 0.46 +0.0 28,552 + CSW01_14165 0.48 +0.2 28,575 + CSW01_14165 0.50 +1.5 28,575 + CSW01_14165 0.50 +0.8 28,575 + CSW01_14165 0.50 -0.4 28,576 - CSW01_14165 0.50 +0.0 28,583 - CSW01_14165 0.51 +0.2 28,583 - CSW01_14165 0.51 -0.1 28,583 - CSW01_14165 0.51 +0.2 28,583 - CSW01_14165 0.51 +0.3 28,583 - CSW01_14165 0.51 -0.2
Or see this region's nucleotide sequence