Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_14010

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCSW01_14000 and CSW01_14005 are separated by 34 nucleotidesCSW01_14005 and CSW01_14010 are separated by 44 nucleotidesCSW01_14010 and CSW01_14015 are separated by 13 nucleotidesCSW01_14015 and CSW01_14020 are separated by 14 nucleotides CSW01_14000: CSW01_14000 - ATP synthase subunit beta, at 2,981,548 to 2,982,951 _14000 CSW01_14005: CSW01_14005 - ATP synthase subunit gamma, at 2,982,986 to 2,983,852 _14005 CSW01_14010: CSW01_14010 - ATP synthase subunit alpha, at 2,983,897 to 2,985,438 _14010 CSW01_14015: CSW01_14015 - ATP synthase subunit delta, at 2,985,452 to 2,985,985 _14015 CSW01_14020: CSW01_14020 - ATP synthase subunit B, at 2,986,000 to 2,986,470 _14020 Position (kb) 2983 2984 2985 2986Strain fitness (log2 ratio) -1 0 1at 2983.860 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,983,860 - -1.1

Or see this region's nucleotide sequence