Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_13865

Experiment: NoPhageControl

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NoPhageControl
2,952,947	-		CSW01_13860	0.12	-1.0
2,952,963	+		CSW01_13860	0.14	+0.1
2,952,977	+		CSW01_13860	0.15	+0.0
2,952,985	-		CSW01_13860	0.16	-0.8
2,953,004	-		CSW01_13860	0.18	+0.3
2,953,019	+		CSW01_13860	0.19	-0.5
2,953,027	-		CSW01_13860	0.20	+0.3
2,953,027	-		CSW01_13860	0.20	+0.5
2,953,035	+		CSW01_13860	0.21	-0.2
2,953,084	-		CSW01_13860	0.25	-1.0
2,953,103	-		CSW01_13860	0.27	-0.3
2,953,116	+		CSW01_13860	0.28	+0.3
2,953,126	+		CSW01_13860	0.29	-0.2
2,953,181	-		CSW01_13860	0.34	-0.3
2,953,181	-		CSW01_13860	0.34	-0.7
2,953,228	-		CSW01_13860	0.39	+0.2
2,953,259	+		CSW01_13860	0.42	+0.2
2,953,267	-		CSW01_13860	0.42	-0.4
2,953,274	+		CSW01_13860	0.43	-0.1
2,953,274	+		CSW01_13860	0.43	+0.4
2,953,274	+		CSW01_13860	0.43	-1.1
2,953,274	+		CSW01_13860	0.43	+0.0
2,953,280	+		CSW01_13860	0.44	-2.0
2,953,282	-		CSW01_13860	0.44	-0.9
2,953,282	-		CSW01_13860	0.44	-0.7
2,953,310	-		CSW01_13860	0.46	-0.3
2,953,372	-		CSW01_13860	0.52	+0.7
2,953,452	+		CSW01_13860	0.60	-1.3
2,953,535	+		CSW01_13860	0.68	-0.0
2,953,566	-		CSW01_13860	0.71	-0.4
2,953,612	+		CSW01_13860	0.75	-0.1
2,953,612	+		CSW01_13860	0.75	+1.1
2,953,612	+		CSW01_13860	0.75	+0.2
2,953,612	+		CSW01_13860	0.75	+0.4
2,953,620	-		CSW01_13860	0.76	+0.3
2,953,620	-		CSW01_13860	0.76	+0.0
2,953,620	-		CSW01_13860	0.76	-0.2
2,953,620	-		CSW01_13860	0.76	+0.0
2,953,620	-		CSW01_13860	0.76	+1.4
2,953,622	-		CSW01_13860	0.76	-0.3
2,953,622	-		CSW01_13860	0.76	+0.4
2,953,666	-		CSW01_13860	0.80	+0.7
2,953,701	+		CSW01_13860	0.83	-0.0
2,953,701	+		CSW01_13860	0.83	-0.5
2,953,701	+		CSW01_13860	0.83	+0.2
2,953,709	-		CSW01_13860	0.84	+0.1
2,953,723	+		CSW01_13860	0.85	-0.3
2,953,723	+		CSW01_13860	0.85	+0.0
2,953,723	+		CSW01_13860	0.85	-0.0
2,953,723	+		CSW01_13860	0.85	-0.8
2,953,731	-		CSW01_13860	0.86	+0.4
2,953,731	-		CSW01_13860	0.86	-0.4
2,953,731	-		CSW01_13860	0.86	+0.0
2,953,731	-		CSW01_13860	0.86	-0.4
2,953,736	-		CSW01_13860	0.86	-0.1
2,953,760	+		CSW01_13860	0.89	+0.0
2,953,760	+		CSW01_13860	0.89	-0.5
2,953,760	+		CSW01_13860	0.89	+0.1
2,953,760	+		CSW01_13860	0.89	+0.2
2,953,760	+		CSW01_13860	0.89	-0.5
2,953,760	+		CSW01_13860	0.89	-0.3
2,953,760	+		CSW01_13860	0.89	-0.8
2,953,760	+		CSW01_13860	0.89	+0.3
2,953,760	+		CSW01_13860	0.89	+0.1
2,953,760	+		CSW01_13860	0.89	-0.1
2,953,761	+		CSW01_13860	0.89	-0.1
2,953,766	+		CSW01_13860	0.89	+0.4
2,953,768	-		CSW01_13860	0.89	+0.0
2,953,768	-		CSW01_13860	0.89	-0.3
2,953,768	-		CSW01_13860	0.89	+0.5
2,953,768	-		CSW01_13860	0.89	-0.4
2,953,768	-		CSW01_13860	0.89	-0.3
2,953,768	-		CSW01_13860	0.89	+1.0
2,953,768	-		CSW01_13860	0.89	+0.7
2,953,768	-		CSW01_13860	0.89	+0.7
2,953,768	-		CSW01_13860	0.89	-0.5
2,953,768	-		CSW01_13860	0.89	+0.2
2,953,768	-		CSW01_13860	0.89	-0.2
2,953,768	-		CSW01_13860	0.89	+0.5
2,953,768	-		CSW01_13860	0.89	-0.6
2,953,816	+				+0.1
2,953,817	+				+0.7
2,953,835	-				-1.0
2,953,835	-				+0.4
2,953,835	-				+0.0
2,953,904	-				-0.7
2,953,906	-				-2.0
2,953,911	-				-0.6
2,953,957	+				-0.0
2,953,957	+				-1.0
2,953,957	+				+0.1
2,954,001	+				-0.1
2,954,016	-				+0.0
2,954,073	+		CSW01_13865	0.13	-0.7
2,954,078	+		CSW01_13865	0.13	-0.5
2,954,081	-		CSW01_13865	0.14	-1.2
2,954,081	-		CSW01_13865	0.14	-0.6
2,954,081	-		CSW01_13865	0.14	+0.4
2,954,083	+		CSW01_13865	0.14	-0.5
2,954,086	-		CSW01_13865	0.14	-0.8
2,954,106	+		CSW01_13865	0.15	+0.6
2,954,106	+		CSW01_13865	0.15	-0.7
2,954,106	+		CSW01_13865	0.15	-0.6
2,954,106	+		CSW01_13865	0.15	+0.2
2,954,106	+		CSW01_13865	0.15	-0.7
2,954,125	+		CSW01_13865	0.17	-1.7
2,954,133	-		CSW01_13865	0.17	-0.1
2,954,152	-		CSW01_13865	0.19	-0.3
2,954,180	+		CSW01_13865	0.21	-1.1
2,954,212	+		CSW01_13865	0.23	+0.3
2,954,232	-		CSW01_13865	0.24	-0.4
2,954,253	+		CSW01_13865	0.26	-0.6
2,954,253	+		CSW01_13865	0.26	-0.3
2,954,261	-		CSW01_13865	0.27	-0.4
2,954,261	-		CSW01_13865	0.27	-2.3
2,954,261	-		CSW01_13865	0.27	+0.7
2,954,271	-		CSW01_13865	0.27	+0.4
2,954,271	-		CSW01_13865	0.27	+0.7
2,954,432	-		CSW01_13865	0.39	-1.5
2,954,439	+		CSW01_13865	0.39	-0.8
2,954,442	-		CSW01_13865	0.39	-0.5
2,954,447	-		CSW01_13865	0.40	+0.4
2,954,447	-		CSW01_13865	0.40	-0.5
2,954,447	-		CSW01_13865	0.40	+1.1
2,954,471	+		CSW01_13865	0.42	-1.4
2,954,547	-		CSW01_13865	0.47	-1.2
2,954,650	-		CSW01_13865	0.54	-0.5
2,954,832	-		CSW01_13865	0.67	-2.2
2,954,843	+		CSW01_13865	0.68	+0.5
2,954,895	-		CSW01_13865	0.72	+0.4
2,954,959	+		CSW01_13865	0.76	-0.6
2,954,988	+		CSW01_13865	0.78	-1.9
2,954,988	+		CSW01_13865	0.78	-0.4
2,955,117	+		CSW01_13865	0.88	-0.2
2,955,127	+		CSW01_13865	0.88	-1.8
2,955,130	-		CSW01_13865	0.89	-0.8
2,955,133	+		CSW01_13865	0.89	-0.4
2,955,236	+				-0.4
2,955,236	+				-0.0
2,955,236	+				-0.4
2,955,296	+				+0.7
2,955,304	-				-0.1
2,955,324	-				+0.3
2,955,334	+				-0.2
2,955,344	+				+0.0
2,955,352	-				-1.0
2,955,352	-				-0.4
2,955,471	-				+1.0
2,955,471	-				-0.4
2,955,473	+				+0.0
2,955,478	+				+0.1
2,955,478	+				-0.3
2,955,624	+		CSW01_13870	0.12	-0.2
2,955,703	-		CSW01_13870	0.15	+0.2
2,955,709	+		CSW01_13870	0.15	+0.6
2,955,719	+		CSW01_13870	0.15	+0.9
2,955,725	+		CSW01_13870	0.15	-0.2
2,955,730	+		CSW01_13870	0.16	+0.6
2,955,743	-		CSW01_13870	0.16	+0.1
2,955,743	-		CSW01_13870	0.16	-0.4
2,955,743	-		CSW01_13870	0.16	+0.2
2,955,743	-		CSW01_13870	0.16	-0.6
2,955,849	-		CSW01_13870	0.20	-0.2
2,955,854	+		CSW01_13870	0.21	-0.5
2,955,854	+		CSW01_13870	0.21	-1.8
2,955,854	+		CSW01_13870	0.21	+0.0
2,955,854	+		CSW01_13870	0.21	-0.2
2,955,862	-		CSW01_13870	0.21	+0.1
2,955,862	-		CSW01_13870	0.21	-0.3
2,955,862	-		CSW01_13870	0.21	+0.3
2,955,866	-		CSW01_13870	0.21	+0.6
2,955,896	-		CSW01_13870	0.22	-0.8
2,955,903	+		CSW01_13870	0.22	-0.1
2,955,913	+		CSW01_13870	0.23	-0.2
2,956,058	+		CSW01_13870	0.29	+0.5
2,956,101	+		CSW01_13870	0.30	-0.3
2,956,114	-		CSW01_13870	0.31	+0.2
2,956,131	+		CSW01_13870	0.31	+0.9
2,956,147	+		CSW01_13870	0.32	-0.2
2,956,147	+		CSW01_13870	0.32	-0.7
2,956,147	+		CSW01_13870	0.32	-0.0
2,956,203	-		CSW01_13870	0.34	-0.6
2,956,219	+		CSW01_13870	0.35	-0.6
2,956,219	+		CSW01_13870	0.35	-1.8
2,956,219	+		CSW01_13870	0.35	+1.0
2,956,219	+		CSW01_13870	0.35	+0.3
2,956,219	+		CSW01_13870	0.35	-0.6
2,956,219	+		CSW01_13870	0.35	+0.0
2,956,219	+		CSW01_13870	0.35	-0.3
2,956,219	+		CSW01_13870	0.35	-0.5
2,956,227	-		CSW01_13870	0.35	-0.4
2,956,227	-		CSW01_13870	0.35	-0.3
2,956,227	-		CSW01_13870	0.35	-0.2
2,956,227	-		CSW01_13870	0.35	+0.2
2,956,227	-		CSW01_13870	0.35	+1.3
2,956,227	-		CSW01_13870	0.35	+0.4
2,956,227	-		CSW01_13870	0.35	-0.6
2,956,227	-		CSW01_13870	0.35	+0.3
2,956,244	-		CSW01_13870	0.36	-0.8
2,956,272	-		CSW01_13870	0.37	-0.2
2,956,274	+		CSW01_13870	0.37	+0.1
2,956,282	-		CSW01_13870	0.37	-0.6
2,956,283	-		CSW01_13870	0.37	-1.9