Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_13380

Experiment: NoPhageControl

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NoPhageControl
2,846,496	+				-1.1
2,846,504	-				-0.2
2,846,504	-				-0.3
2,846,513	-				-0.5
2,846,581	+				-0.0
2,846,586	+				+0.6
2,846,602	+				+0.2
2,846,615	-				-0.7
2,846,688	+				-0.4
2,846,688	+				-0.5
2,846,696	-				-1.3
2,846,701	-				-0.3
2,846,797	+		CSW01_13375	0.21	+0.6
2,846,820	+		CSW01_13375	0.23	+0.3
2,846,828	-		CSW01_13375	0.24	+0.0
2,846,859	-		CSW01_13375	0.28	+0.8
2,846,864	-		CSW01_13375	0.29	+0.0
2,846,870	+		CSW01_13375	0.30	+0.2
2,846,930	+		CSW01_13375	0.37	-0.6
2,846,938	-		CSW01_13375	0.38	-0.6
2,846,938	-		CSW01_13375	0.38	+0.5
2,846,938	-		CSW01_13375	0.38	-0.8
2,846,938	-		CSW01_13375	0.38	-0.2
2,846,938	-		CSW01_13375	0.38	+1.1
2,846,950	+		CSW01_13375	0.40	-0.0
2,847,038	+		CSW01_13375	0.51	-0.5
2,847,046	-		CSW01_13375	0.52	+0.3
2,847,057	+		CSW01_13375	0.53	-0.4
2,847,057	+		CSW01_13375	0.53	-0.2
2,847,065	-		CSW01_13375	0.54	+0.6
2,847,227	+		CSW01_13375	0.75	-0.2
2,847,281	-		CSW01_13375	0.82	+0.6
2,847,304	+		CSW01_13375	0.85	+0.4
2,847,315	+		CSW01_13375	0.86	+1.3
2,847,370	-				-0.8
2,847,396	+				-1.2
2,847,404	-				-0.2
2,847,404	-				+0.7
2,847,430	+				+1.0
2,847,430	+				+0.4
2,847,439	-				+0.3
2,847,538	+		CSW01_13380	0.10	+0.3
2,847,546	-		CSW01_13380	0.11	+0.3
2,847,547	+		CSW01_13380	0.11	-1.1
2,847,547	+		CSW01_13380	0.11	+0.2
2,847,547	+		CSW01_13380	0.11	-0.0
2,847,555	-		CSW01_13380	0.12	-0.2
2,847,555	-		CSW01_13380	0.12	+0.5
2,847,555	-		CSW01_13380	0.12	-0.1
2,847,555	-		CSW01_13380	0.12	+0.1
2,847,563	-		CSW01_13380	0.13	-0.2
2,847,565	-		CSW01_13380	0.13	-0.5
2,847,668	+		CSW01_13380	0.23	+0.7
2,847,702	+		CSW01_13380	0.27	+0.0
2,847,741	+		CSW01_13380	0.31	+0.2
2,847,747	+		CSW01_13380	0.31	-1.2
2,847,747	+		CSW01_13380	0.31	-0.1
2,847,766	+		CSW01_13380	0.33	+0.3
2,847,766	+		CSW01_13380	0.33	+0.7
2,847,766	+		CSW01_13380	0.33	-0.1
2,847,766	+		CSW01_13380	0.33	-0.1
2,847,766	+		CSW01_13380	0.33	+1.0
2,847,774	-		CSW01_13380	0.34	+0.2
2,847,774	-		CSW01_13380	0.34	+1.3
2,847,774	-		CSW01_13380	0.34	+0.3
2,847,774	-		CSW01_13380	0.34	+0.5
2,847,774	-		CSW01_13380	0.34	+0.3
2,847,774	-		CSW01_13380	0.34	-0.9
2,847,774	-		CSW01_13380	0.34	-2.0
2,847,774	-		CSW01_13380	0.34	+0.6
2,847,774	-		CSW01_13380	0.34	+0.0
2,847,774	-		CSW01_13380	0.34	+0.2
2,847,774	-		CSW01_13380	0.34	-0.2
2,847,801	+		CSW01_13380	0.37	-1.0
2,847,810	-		CSW01_13380	0.38	-0.7
2,847,812	+		CSW01_13380	0.38	-0.1
2,847,812	+		CSW01_13380	0.38	-0.2
2,847,812	+		CSW01_13380	0.38	+0.1
2,847,812	+		CSW01_13380	0.38	+0.5
2,847,812	+		CSW01_13380	0.38	+0.2
2,847,820	-		CSW01_13380	0.39	-0.1
2,847,820	-		CSW01_13380	0.39	+0.8
2,847,820	-		CSW01_13380	0.39	-0.0
2,847,820	-		CSW01_13380	0.39	-0.5
2,847,857	+		CSW01_13380	0.42	+0.1
2,847,874	+		CSW01_13380	0.44	-3.0
2,847,886	-		CSW01_13380	0.45	+0.0
2,847,904	+		CSW01_13380	0.47	+0.0
2,847,904	+		CSW01_13380	0.47	-0.5
2,847,912	-		CSW01_13380	0.48	-0.8
2,847,912	-		CSW01_13380	0.48	-0.3
2,847,912	-		CSW01_13380	0.48	-0.1
2,847,931	+		CSW01_13380	0.50	+0.3
2,847,933	-		CSW01_13380	0.50	-0.8
2,848,021	+		CSW01_13380	0.59	+0.1
2,848,041	-		CSW01_13380	0.61	+0.4
2,848,071	+		CSW01_13380	0.64	-1.1
2,848,098	+		CSW01_13380	0.66	+0.1
2,848,179	-		CSW01_13380	0.74	-0.4
2,848,181	-		CSW01_13380	0.75	-0.7
2,848,212	+		CSW01_13380	0.78	-0.7
2,848,220	-		CSW01_13380	0.79	-0.2
2,848,234	+		CSW01_13380	0.80	+0.0
2,848,244	+		CSW01_13380	0.81	-1.0
2,848,249	+		CSW01_13380	0.81	+0.3
2,848,249	+		CSW01_13380	0.81	-0.2
2,848,322	-		CSW01_13380	0.89	+0.2
2,848,322	-		CSW01_13380	0.89	+0.6
2,848,335	+				+0.3
2,848,336	+				+0.0
2,848,336	+				+0.4
2,848,336	+				-0.6
2,848,336	+				+0.3
2,848,344	-				+0.1
2,848,376	+				+0.1
2,848,386	+				+0.4
2,848,394	-				-0.3
2,848,394	-				-0.3
2,848,405	-				+0.2
2,848,446	+				+0.9
2,848,613	+				-1.1
2,848,613	+				+0.7
2,848,613	+				+0.7
2,848,621	-				-0.1
2,848,628	+				+0.4
2,848,631	-				+0.3
2,848,631	-				-0.3
2,848,656	-				+0.7
2,848,683	-				+0.6
2,848,817	+		CSW01_13385	0.20	+0.1
2,848,817	+		CSW01_13385	0.20	-0.0
2,848,817	+		CSW01_13385	0.20	-0.6
2,848,825	-		CSW01_13385	0.21	-0.2
2,848,825	-		CSW01_13385	0.21	+0.8
2,848,825	-		CSW01_13385	0.21	-0.1
2,848,825	-		CSW01_13385	0.21	-0.1
2,848,825	-		CSW01_13385	0.21	+0.3
2,848,825	-		CSW01_13385	0.21	+0.0
2,848,825	-		CSW01_13385	0.21	-0.2
2,848,825	-		CSW01_13385	0.21	-1.4
2,848,921	-		CSW01_13385	0.29	-0.1
2,849,029	-		CSW01_13385	0.39	+0.1
2,849,034	-		CSW01_13385	0.39	+0.2
2,849,071	-		CSW01_13385	0.42	-0.6
2,849,092	+		CSW01_13385	0.44	-0.6
2,849,100	-		CSW01_13385	0.45	-0.1
2,849,105	-		CSW01_13385	0.45	-0.3
2,849,112	+		CSW01_13385	0.46	+0.2
2,849,120	-		CSW01_13385	0.47	+1.5
2,849,120	-		CSW01_13385	0.47	-0.0
2,849,182	+		CSW01_13385	0.52	+0.0
2,849,190	-		CSW01_13385	0.53	+0.3
2,849,190	-		CSW01_13385	0.53	+0.8
2,849,284	+		CSW01_13385	0.61	-0.2
2,849,289	+		CSW01_13385	0.61	+0.3
2,849,296	+		CSW01_13385	0.62	+0.3
2,849,326	-		CSW01_13385	0.65	-0.5
2,849,341	-		CSW01_13385	0.66	+0.2
2,849,354	+		CSW01_13385	0.67	-2.0
2,849,381	-		CSW01_13385	0.70	+0.6
2,849,381	-		CSW01_13385	0.70	+0.4
2,849,394	+		CSW01_13385	0.71	+0.5
2,849,429	-		CSW01_13385	0.74	+0.0