Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_03570

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCSW01_03565 and CSW01_03570 are separated by 68 nucleotidesCSW01_03570 and CSW01_03575 are separated by 30 nucleotides CSW01_03565: CSW01_03565 - lipid II flippase MurJ, at 724,786 to 726,363 _03565 CSW01_03570: CSW01_03570 - bifunctional riboflavin kinase/FMN adenylyltransferase, at 726,432 to 727,400 _03570 CSW01_03575: CSW01_03575 - isoleucine--tRNA ligase, at 727,431 to 730,280 _03575 Position (kb) 726 727 728Strain fitness (log2 ratio) -2 -1 0 1at 726.373 kb on + strandat 727.355 kb on + strandat 727.355 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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726,373 + +0.8
727,355 + -1.7
727,355 + -2.7

Or see this region's nucleotide sequence