Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CSW01_01640 and CSW01_01645 are separated by 4 nucleotides CSW01_01645 and CSW01_01650 are separated by 35 nucleotides CSW01_01650 and CSW01_01655 are separated by 35 nucleotides CSW01_01655 and CSW01_01660 are separated by 13 nucleotides CSW01_01660 and CSW01_01665 are separated by 112 nucleotides CSW01_01665 and CSW01_01670 are separated by 223 nucleotides CSW01_01670 and CSW01_01675 are separated by 15 nucleotides
CSW01_01640: CSW01_01640 - type I pantothenate kinase, at 332,427 to 333,554
_01640
CSW01_01645: CSW01_01645 - tRNA-Thr, at 333,559 to 333,634
_01645
CSW01_01650: CSW01_01650 - tRNA-Tyr, at 333,670 to 333,754
_01650
CSW01_01655: CSW01_01655 - tRNA-Gly, at 333,790 to 333,864
_01655
CSW01_01660: CSW01_01660 - tRNA-Thr, at 333,878 to 333,953
_01660
CSW01_01665: CSW01_01665 - elongation factor Tu-A, at 334,066 to 335,250
_01665
CSW01_01670: CSW01_01670 - protein translocase subunit SecE, at 335,474 to 335,854
_01670
CSW01_01675: CSW01_01675 - transcription termination/antitermination protein NusG, at 335,870 to 336,418
_01675
Position (kb) 334
335
336 Strain fitness (log2 ratio) -2
-1
0
1 at 333.508 kb on + strand at 334.070 kb on - strand at 334.694 kb on - strand, within CSW01_01665 at 335.266 kb on + strand at 335.849 kb on + strand
Per-strain Table
Or see this region's nucleotide sequence