Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_01635

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCSW01_01630 and CSW01_01635 overlap by 4 nucleotidesCSW01_01635 and CSW01_01640 are separated by 49 nucleotides CSW01_01630: CSW01_01630 - UDP-N-acetylmuramate dehydrogenase, at 330,345 to 331,418 _01630 CSW01_01635: CSW01_01635 - bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA, at 331,415 to 332,377 _01635 CSW01_01640: CSW01_01640 - type I pantothenate kinase, at 332,427 to 333,554 _01640 Position (kb) 331 332 333Strain fitness (log2 ratio) -1 0 1at 331.423 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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331,423 + -0.9

Or see this region's nucleotide sequence