Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1422

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1421 and Ac3H11_1422 are separated by 58 nucleotidesAc3H11_1422 and Ac3H11_1423 are separated by 199 nucleotides Ac3H11_1421 - Signal transduction histidine kinase CheA (EC 2.7.3.-), at 107,879 to 110,014 _1421 Ac3H11_1422 - Positive regulator of CheA protein activity (CheW), at 110,073 to 110,561 _1422 Ac3H11_1423 - Chemotaxis protein methyltransferase CheR (EC 2.1.1.80), at 110,761 to 111,573 _1423 Position (kb) 110 111Strain fitness (log2 ratio) -2 -1 0 1 2at 109.563 kb on - strand, within Ac3H11_1421at 109.563 kb on - strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.615 kb on + strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.616 kb on - strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.643 kb on + strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.644 kb on - strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.745 kb on + strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.746 kb on - strand, within Ac3H11_1421at 109.913 kb on + strandat 109.913 kb on + strandat 109.913 kb on + strandat 109.914 kb on - strandat 109.914 kb on - strandat 110.087 kb on + strandat 110.087 kb on + strandat 110.087 kb on + strandat 110.087 kb on + strandat 110.087 kb on + strandat 110.088 kb on - strandat 110.088 kb on - strandat 110.088 kb on - strandat 110.088 kb on - strandat 110.088 kb on - strandat 110.124 kb on + strand, within Ac3H11_1422at 110.124 kb on + strand, within Ac3H11_1422at 110.124 kb on + strand, within Ac3H11_1422at 110.125 kb on - strand, within Ac3H11_1422at 110.155 kb on - strand, within Ac3H11_1422at 110.155 kb on - strand, within Ac3H11_1422at 110.155 kb on - strand, within Ac3H11_1422at 110.193 kb on + strand, within Ac3H11_1422at 110.193 kb on + strand, within Ac3H11_1422at 110.313 kb on + strand, within Ac3H11_1422at 110.313 kb on + strand, within Ac3H11_1422at 110.313 kb on + strand, within Ac3H11_1422at 110.313 kb on + strand, within Ac3H11_1422at 110.313 kb on + strand, within Ac3H11_1422at 110.314 kb on - strand, within Ac3H11_1422at 110.559 kb on + strandat 110.559 kb on + strandat 110.559 kb on + strandat 110.667 kb on + strandat 110.667 kb on + strandat 110.667 kb on + strandat 110.668 kb on - strandat 110.668 kb on - strandat 110.668 kb on - strandat 110.668 kb on - strandat 110.668 kb on - strandat 110.731 kb on + strandat 110.731 kb on + strandat 110.731 kb on + strandat 110.731 kb on + strandat 110.731 kb on + strandat 110.731 kb on + strandat 110.731 kb on + strandat 110.731 kb on + strandat 110.731 kb on + strandat 110.732 kb on - strandat 110.732 kb on - strandat 110.732 kb on - strandat 110.732 kb on - strandat 110.732 kb on - strandat 110.732 kb on - strandat 110.732 kb on - strandat 110.732 kb on - strandat 110.824 kb on + strandat 110.824 kb on + strandat 110.824 kb on + strandat 110.824 kb on + strandat 110.824 kb on + strandat 110.825 kb on - strandat 110.872 kb on + strand, within Ac3H11_1423at 110.872 kb on + strand, within Ac3H11_1423at 110.873 kb on - strand, within Ac3H11_1423at 110.873 kb on - strand, within Ac3H11_1423at 110.873 kb on - strand, within Ac3H11_1423at 110.873 kb on - strand, within Ac3H11_1423at 110.873 kb on - strand, within Ac3H11_1423at 110.926 kb on + strand, within Ac3H11_1423at 110.927 kb on - strand, within Ac3H11_1423at 110.927 kb on - strand, within Ac3H11_1423at 111.097 kb on - strand, within Ac3H11_1423at 111.112 kb on + strand, within Ac3H11_1423at 111.220 kb on + strand, within Ac3H11_1423at 111.221 kb on - strand, within Ac3H11_1423at 111.421 kb on + strand, within Ac3H11_1423at 111.421 kb on + strand, within Ac3H11_1423at 111.421 kb on + strand, within Ac3H11_1423at 111.421 kb on + strand, within Ac3H11_1423at 111.421 kb on + strand, within Ac3H11_1423at 111.421 kb on + strand, within Ac3H11_1423at 111.421 kb on + strand, within Ac3H11_1423at 111.422 kb on - strand, within Ac3H11_1423at 111.422 kb on - strand, within Ac3H11_1423at 111.422 kb on - strand, within Ac3H11_1423at 111.422 kb on - strand, within Ac3H11_1423at 111.422 kb on - strand, within Ac3H11_1423at 111.422 kb on - strand, within Ac3H11_1423at 111.422 kb on - strand, within Ac3H11_1423at 111.537 kb on + strandat 111.537 kb on + strandat 111.538 kb on - strandat 111.559 kb on + strandat 111.559 kb on + strandat 111.559 kb on + strandat 111.559 kb on + strandat 111.559 kb on + strandat 111.559 kb on + strandat 111.560 kb on - strandat 111.560 kb on - strandat 111.560 kb on - strandat 111.560 kb on - strandat 111.560 kb on - strandat 111.560 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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109,563 - Ac3H11_1421 0.79 +0.9
109,563 - Ac3H11_1421 0.79 +0.6
109,615 + Ac3H11_1421 0.81 +0.9
109,615 + Ac3H11_1421 0.81 -0.0
109,615 + Ac3H11_1421 0.81 +0.2
109,615 + Ac3H11_1421 0.81 -0.4
109,615 + Ac3H11_1421 0.81 +0.1
109,615 + Ac3H11_1421 0.81 +0.1
109,615 + Ac3H11_1421 0.81 +0.5
109,615 + Ac3H11_1421 0.81 +0.2
109,615 + Ac3H11_1421 0.81 +0.6
109,615 + Ac3H11_1421 0.81 +0.5
109,615 + Ac3H11_1421 0.81 +0.3
109,615 + Ac3H11_1421 0.81 +0.9
109,616 - Ac3H11_1421 0.81 +1.1
109,616 - Ac3H11_1421 0.81 +0.7
109,616 - Ac3H11_1421 0.81 +0.4
109,616 - Ac3H11_1421 0.81 +0.8
109,616 - Ac3H11_1421 0.81 +0.2
109,616 - Ac3H11_1421 0.81 +0.0
109,616 - Ac3H11_1421 0.81 +0.9
109,616 - Ac3H11_1421 0.81 +0.9
109,616 - Ac3H11_1421 0.81 +0.3
109,616 - Ac3H11_1421 0.81 +0.3
109,616 - Ac3H11_1421 0.81 +0.5
109,616 - Ac3H11_1421 0.81 +0.3
109,616 - Ac3H11_1421 0.81 +0.5
109,643 + Ac3H11_1421 0.83 +0.3
109,643 + Ac3H11_1421 0.83 +1.3
109,643 + Ac3H11_1421 0.83 -0.2
109,643 + Ac3H11_1421 0.83 +0.4
109,643 + Ac3H11_1421 0.83 +1.2
109,643 + Ac3H11_1421 0.83 -0.1
109,643 + Ac3H11_1421 0.83 +1.2
109,643 + Ac3H11_1421 0.83 +0.4
109,643 + Ac3H11_1421 0.83 -0.2
109,643 + Ac3H11_1421 0.83 +0.4
109,643 + Ac3H11_1421 0.83 +1.2
109,643 + Ac3H11_1421 0.83 +0.4
109,643 + Ac3H11_1421 0.83 -0.1
109,643 + Ac3H11_1421 0.83 +1.1
109,643 + Ac3H11_1421 0.83 +0.8
109,643 + Ac3H11_1421 0.83 +0.4
109,643 + Ac3H11_1421 0.83 +1.0
109,643 + Ac3H11_1421 0.83 +0.3
109,643 + Ac3H11_1421 0.83 -0.9
109,643 + Ac3H11_1421 0.83 -1.4
109,643 + Ac3H11_1421 0.83 -0.0
109,643 + Ac3H11_1421 0.83 -0.9
109,643 + Ac3H11_1421 0.83 +1.3
109,643 + Ac3H11_1421 0.83 +0.1
109,643 + Ac3H11_1421 0.83 +0.4
109,643 + Ac3H11_1421 0.83 +0.9
109,643 + Ac3H11_1421 0.83 +1.0
109,643 + Ac3H11_1421 0.83 +0.6
109,643 + Ac3H11_1421 0.83 -0.4
109,643 + Ac3H11_1421 0.83 -0.1
109,643 + Ac3H11_1421 0.83 +0.7
109,643 + Ac3H11_1421 0.83 +0.3
109,644 - Ac3H11_1421 0.83 -0.2
109,644 - Ac3H11_1421 0.83 +0.9
109,644 - Ac3H11_1421 0.83 +0.6
109,644 - Ac3H11_1421 0.83 -0.1
109,644 - Ac3H11_1421 0.83 +0.5
109,644 - Ac3H11_1421 0.83 +0.6
109,644 - Ac3H11_1421 0.83 +1.0
109,644 - Ac3H11_1421 0.83 +0.8
109,644 - Ac3H11_1421 0.83 +0.6
109,644 - Ac3H11_1421 0.83 +0.2
109,644 - Ac3H11_1421 0.83 +0.7
109,644 - Ac3H11_1421 0.83 +0.8
109,644 - Ac3H11_1421 0.83 +1.3
109,644 - Ac3H11_1421 0.83 +1.8
109,745 + Ac3H11_1421 0.87 -0.2
109,745 + Ac3H11_1421 0.87 +0.4
109,745 + Ac3H11_1421 0.87 +0.4
109,745 + Ac3H11_1421 0.87 +1.0
109,745 + Ac3H11_1421 0.87 +1.5
109,745 + Ac3H11_1421 0.87 -2.2
109,745 + Ac3H11_1421 0.87 +0.8
109,745 + Ac3H11_1421 0.87 -0.2
109,745 + Ac3H11_1421 0.87 +0.6
109,745 + Ac3H11_1421 0.87 +0.3
109,745 + Ac3H11_1421 0.87 +1.0
109,746 - Ac3H11_1421 0.87 +0.8
109,746 - Ac3H11_1421 0.87 +0.5
109,746 - Ac3H11_1421 0.87 +0.7
109,746 - Ac3H11_1421 0.87 +0.3
109,746 - Ac3H11_1421 0.87 -0.4
109,746 - Ac3H11_1421 0.87 +0.7
109,746 - Ac3H11_1421 0.87 +0.7
109,746 - Ac3H11_1421 0.87 +1.0
109,746 - Ac3H11_1421 0.87 +0.6
109,746 - Ac3H11_1421 0.87 +1.5
109,746 - Ac3H11_1421 0.87 +0.6
109,746 - Ac3H11_1421 0.87 +0.7
109,746 - Ac3H11_1421 0.87 -0.7
109,746 - Ac3H11_1421 0.87 +1.1
109,746 - Ac3H11_1421 0.87 +1.4
109,746 - Ac3H11_1421 0.87 +1.8
109,913 + +0.1
109,913 + +1.1
109,913 + +0.8
109,914 - +1.3
109,914 - -0.3
110,087 + +1.0
110,087 + +1.7
110,087 + +0.2
110,087 + +1.1
110,087 + +0.7
110,088 - -0.2
110,088 - -0.1
110,088 - +0.5
110,088 - +0.6
110,088 - +0.6
110,124 + Ac3H11_1422 0.10 +0.9
110,124 + Ac3H11_1422 0.10 +0.3
110,124 + Ac3H11_1422 0.10 +0.3
110,125 - Ac3H11_1422 0.11 +0.0
110,155 - Ac3H11_1422 0.17 -0.1
110,155 - Ac3H11_1422 0.17 -0.1
110,155 - Ac3H11_1422 0.17 -0.5
110,193 + Ac3H11_1422 0.25 +0.4
110,193 + Ac3H11_1422 0.25 -0.0
110,313 + Ac3H11_1422 0.49 +1.0
110,313 + Ac3H11_1422 0.49 +0.3
110,313 + Ac3H11_1422 0.49 +0.1
110,313 + Ac3H11_1422 0.49 +1.2
110,313 + Ac3H11_1422 0.49 +0.3
110,314 - Ac3H11_1422 0.49 -1.6
110,559 + -1.4
110,559 + +1.2
110,559 + -0.7
110,667 + -0.7
110,667 + -1.6
110,667 + +0.6
110,668 - +0.1
110,668 - +0.7
110,668 - +1.5
110,668 - -0.6
110,668 - +0.4
110,731 + +0.4
110,731 + +0.9
110,731 + -0.1
110,731 + -0.1
110,731 + -0.1
110,731 + +0.5
110,731 + -0.9
110,731 + +0.2
110,731 + +0.4
110,732 - +1.0
110,732 - +0.1
110,732 - -0.6
110,732 - +0.6
110,732 - +0.6
110,732 - +0.2
110,732 - +1.2
110,732 - -1.2
110,824 + +0.8
110,824 + +1.3
110,824 + +1.5
110,824 + +0.4
110,824 + -0.1
110,825 - +1.5
110,872 + Ac3H11_1423 0.14 -0.7
110,872 + Ac3H11_1423 0.14 +0.7
110,873 - Ac3H11_1423 0.14 +1.4
110,873 - Ac3H11_1423 0.14 +0.1
110,873 - Ac3H11_1423 0.14 -0.3
110,873 - Ac3H11_1423 0.14 -0.5
110,873 - Ac3H11_1423 0.14 +0.0
110,926 + Ac3H11_1423 0.20 +0.5
110,927 - Ac3H11_1423 0.20 +0.1
110,927 - Ac3H11_1423 0.20 +0.7
111,097 - Ac3H11_1423 0.41 +1.4
111,112 + Ac3H11_1423 0.43 +1.3
111,220 + Ac3H11_1423 0.56 -1.1
111,221 - Ac3H11_1423 0.57 -0.8
111,421 + Ac3H11_1423 0.81 +1.3
111,421 + Ac3H11_1423 0.81 +0.1
111,421 + Ac3H11_1423 0.81 +0.4
111,421 + Ac3H11_1423 0.81 +0.5
111,421 + Ac3H11_1423 0.81 +0.1
111,421 + Ac3H11_1423 0.81 +0.4
111,421 + Ac3H11_1423 0.81 +1.7
111,422 - Ac3H11_1423 0.81 +0.8
111,422 - Ac3H11_1423 0.81 -2.0
111,422 - Ac3H11_1423 0.81 +1.5
111,422 - Ac3H11_1423 0.81 +0.7
111,422 - Ac3H11_1423 0.81 +0.2
111,422 - Ac3H11_1423 0.81 +1.0
111,422 - Ac3H11_1423 0.81 +0.4
111,537 + +0.5
111,537 + +1.0
111,538 - -0.6
111,559 + -0.1
111,559 + +0.6
111,559 + +0.6
111,559 + +0.9
111,559 + +1.4
111,559 + +0.4
111,560 - +0.5
111,560 - +0.5
111,560 - +1.1
111,560 - -1.4
111,560 - +0.9
111,560 - -0.5

Or see this region's nucleotide sequence