Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28685

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
6,244,922	+				-0.5
6,244,922	+				+0.8
6,244,922	+				+0.5
6,244,922	+				+1.4
6,244,922	+				+0.8
6,244,922	+				+0.4
6,244,922	+				+2.0
6,244,922	+				+1.4
6,244,922	+				+1.3
6,244,923	-				+1.7
6,244,923	-				+1.4
6,244,923	-				-0.0
6,244,923	-				-3.0
6,244,926	+				+0.1
6,244,926	+				-1.0
6,244,941	+				-2.5
6,244,956	+				-1.2
6,244,959	+				-0.2
6,244,960	-				-0.8
6,245,012	+				-0.2
6,245,012	+				+0.2
6,245,012	+				-0.4
6,245,012	+				-0.3
6,245,013	-				-0.8
6,245,013	-				+1.8
6,245,013	-				+0.0
6,245,017	+				-1.5
6,245,017	+				-1.8
6,245,017	+				-0.8
6,245,017	+				-0.8
6,245,017	+				-0.8
6,245,017	+				+0.2
6,245,017	+				+0.8
6,245,018	-				-1.0
6,245,105	+				-0.7
6,245,105	+				-1.5
6,245,106	-				+0.2
6,245,106	-				+0.8
6,245,225	+		AO353_28675	0.29	-0.3
6,245,225	+		AO353_28675	0.29	-1.8
6,245,226	-		AO353_28675	0.29	-0.2
6,245,429	-		AO353_28675	0.83	-2.0
6,245,473	-				+0.2
6,245,473	-				-1.0
6,245,625	+		AO353_28680	0.51	+1.2
6,245,625	+		AO353_28680	0.51	+0.4
6,245,625	+		AO353_28680	0.51	+2.0
6,245,686	+		AO353_28680	0.72	+2.4
6,245,686	+		AO353_28680	0.72	-0.8
6,245,686	+		AO353_28680	0.72	-0.3
6,245,686	+		AO353_28680	0.72	-1.5
6,245,687	-		AO353_28680	0.72	-0.2
6,245,687	-		AO353_28680	0.72	-0.5
6,245,687	-		AO353_28680	0.72	-0.4
6,245,687	-		AO353_28680	0.72	+0.4
6,245,734	-		AO353_28680	0.89	-0.8
6,245,779	-				+0.3
6,245,839	+				+0.4
6,245,839	+				+1.4
6,245,839	+				-1.8
6,245,840	-				-0.4
6,245,840	-				+1.2
6,245,840	-				+0.3
6,245,840	-				-0.8
6,245,840	-				+2.2
6,245,856	+				-1.5
6,245,857	-				-0.2
6,245,857	-				-1.4
6,245,877	+				+2.4
6,245,878	-				+0.0
6,245,969	+		AO353_28685	0.24	+1.4
6,245,988	+		AO353_28685	0.32	+0.5
6,245,988	+		AO353_28685	0.32	-0.8
6,245,989	-		AO353_28685	0.32	-2.0
6,245,989	-		AO353_28685	0.32	-0.6
6,246,041	+		AO353_28685	0.53	+0.8
6,246,049	+		AO353_28685	0.56	-2.5
6,246,049	+		AO353_28685	0.56	+0.1
6,246,049	+		AO353_28685	0.56	-0.4
6,246,049	+		AO353_28685	0.56	-2.9
6,246,050	-		AO353_28685	0.56	+0.5
6,246,050	-		AO353_28685	0.56	+1.5
6,246,050	-		AO353_28685	0.56	+1.5
6,246,050	-		AO353_28685	0.56	+0.3
6,246,050	-		AO353_28685	0.56	-0.2
6,246,050	-		AO353_28685	0.56	-0.2
6,246,050	-		AO353_28685	0.56	-0.2
6,246,050	-		AO353_28685	0.56	+0.2
6,246,050	-		AO353_28685	0.56	+1.1
6,246,050	-		AO353_28685	0.56	+0.1
6,246,084	+		AO353_28685	0.69	-0.1
6,246,098	+		AO353_28685	0.75	+0.4
6,246,098	+		AO353_28685	0.75	+0.1
6,246,098	+		AO353_28685	0.75	+0.7
6,246,098	+		AO353_28685	0.75	+0.1
6,246,098	+		AO353_28685	0.75	-0.7
6,246,098	+		AO353_28685	0.75	+0.5
6,246,098	+		AO353_28685	0.75	-0.0
6,246,098	+		AO353_28685	0.75	+0.2
6,246,098	+		AO353_28685	0.75	-1.1
6,246,098	+		AO353_28685	0.75	-0.0
6,246,098	+		AO353_28685	0.75	+0.2
6,246,098	+		AO353_28685	0.75	-0.2
6,246,098	+		AO353_28685	0.75	+1.5
6,246,098	+		AO353_28685	0.75	+0.1
6,246,098	+		AO353_28685	0.75	+0.8
6,246,098	+		AO353_28685	0.75	+1.2
6,246,098	+		AO353_28685	0.75	+0.5
6,246,098	+		AO353_28685	0.75	+1.4
6,246,098	+		AO353_28685	0.75	+0.4
6,246,098	+		AO353_28685	0.75	+1.4
6,246,098	+		AO353_28685	0.75	-0.5
6,246,098	+		AO353_28685	0.75	+0.8
6,246,098	+		AO353_28685	0.75	+0.3
6,246,098	+		AO353_28685	0.75	+0.5
6,246,098	+		AO353_28685	0.75	+0.2
6,246,099	-		AO353_28685	0.75	+0.2
6,246,099	-		AO353_28685	0.75	+0.3
6,246,099	-		AO353_28685	0.75	+2.0
6,246,099	-		AO353_28685	0.75	+0.1
6,246,099	-		AO353_28685	0.75	+1.4
6,246,099	-		AO353_28685	0.75	+2.2
6,246,099	-		AO353_28685	0.75	+2.0
6,246,099	-		AO353_28685	0.75	+0.1
6,246,099	-		AO353_28685	0.75	+1.6
6,246,099	-		AO353_28685	0.75	-0.9
6,246,099	-		AO353_28685	0.75	-0.8
6,246,099	-		AO353_28685	0.75	+1.2
6,246,099	-		AO353_28685	0.75	+1.8
6,246,099	-		AO353_28685	0.75	+1.2
6,246,099	-		AO353_28685	0.75	-1.5
6,246,099	-		AO353_28685	0.75	+1.8
6,246,099	-		AO353_28685	0.75	+1.8
6,246,099	-		AO353_28685	0.75	+0.8
6,246,099	-		AO353_28685	0.75	-0.5
6,246,099	-		AO353_28685	0.75	-0.8
6,246,099	-				-0.2
6,246,099	-		AO353_28685	0.75	+0.2
6,246,099	-		AO353_28685	0.75	-1.8
6,246,099	-		AO353_28685	0.75	+0.1
6,246,102	+		AO353_28685	0.76	+1.3
6,246,102	+		AO353_28685	0.76	+1.8
6,246,102	+		AO353_28685	0.76	+0.1
6,246,102	+		AO353_28685	0.76	+0.8
6,246,102	+		AO353_28685	0.76	-0.6
6,246,102	+		AO353_28685	0.76	-1.5
6,246,102	+		AO353_28685	0.76	+3.1
6,246,102	+		AO353_28685	0.76	+1.0
6,246,102	+		AO353_28685	0.76	+0.2
6,246,102	+		AO353_28685	0.76	-0.2
6,246,102	+		AO353_28685	0.76	+0.4
6,246,103	-		AO353_28685	0.77	+1.0
6,246,103	-		AO353_28685	0.77	-0.8
6,246,103	-		AO353_28685	0.77	+0.5
6,246,103	-		AO353_28685	0.77	-0.5
6,246,103	-		AO353_28685	0.77	+1.8
6,246,103	-		AO353_28685	0.77	+1.7
6,246,103	-		AO353_28685	0.77	-0.2
6,246,103	-		AO353_28685	0.77	+0.1
6,246,103	-		AO353_28685	0.77	+1.0
6,246,114	+		AO353_28685	0.81	+0.6
6,246,115	-		AO353_28685	0.82	-2.0
6,246,169	+				-0.1
6,246,169	+				+0.1
6,246,169	+				-0.8
6,246,169	+				-0.8
6,246,169	+				-0.8
6,246,169	+				+1.5
6,246,169	+				+1.4
6,246,170	-				-0.8
6,246,170	-				-0.5
6,246,170	-				+1.4
6,246,170	-				+0.1
6,246,170	-				-1.5
6,246,170	-				-0.7
6,246,170	-				+0.2
6,246,170	-				+0.1
6,246,170	-				-0.2
6,246,170	-				+2.1
6,246,249	+				-1.5
6,246,250	-				+0.7
6,246,250	-				-1.4
6,246,262	+				+0.5
6,246,262	+				-0.2
6,246,262	+				-1.3
6,246,262	+				+0.8
6,246,263	-				-0.5
6,246,263	-				+0.8
6,246,263	-				-0.1
6,246,263	-				+0.2
6,246,278	+				-0.4
6,246,278	+				+0.6
6,246,278	+				-0.6
6,246,278	+				-0.4
6,246,278	+				+1.5
6,246,278	+				-0.1
6,246,279	-				-0.5
6,246,279	-				-0.9
6,246,279	-				+0.3
6,246,279	-				-0.8
6,246,297	+				+1.2
6,246,343	+				+0.8
6,246,343	+				-2.2
6,246,343	+				+1.4
6,246,343	+				-0.9
6,246,343	+				+2.2
6,246,343	+				+1.6
6,246,344	-				+1.1
6,246,344	-				+2.8
6,246,344	-				+0.6
6,246,344	-				-1.0
6,246,344	-				-0.4
6,246,344	-				-1.0
6,246,344	-				-0.1
6,246,344	-				+0.5
6,246,366	-				-0.2
6,246,420	+				-1.7
6,246,447	+				+0.5
6,246,447	+				-0.4
6,246,448	-				+0.8
6,246,448	-				+0.9
6,246,448	-				+0.4
6,246,471	+				-0.6
6,246,471	+				+0.2
6,246,471	+				-0.7
6,246,471	+				-0.8
6,246,471	+				+0.4
6,246,472	-				+1.3
6,246,472	-				+0.1
6,246,496	+				-0.8
6,246,556	-				+0.1
6,246,584	-				+0.1
6,246,589	-				+1.2
6,246,596	+				-0.9
6,246,596	+				-0.4
6,246,606	+				-0.2
6,246,607	-				-0.3
6,246,618	+				+1.4
6,246,618	+				-1.7
6,246,618	+				+1.8
6,246,625	-				+2.4
6,246,625	-				-0.0
6,246,639	+				-1.1
6,246,639	+				-0.4
6,246,639	+				+1.2
6,246,639	+				-2.4
6,246,639	+				+2.4
6,246,639	+				-0.9
6,246,640	-				-0.2
6,246,640	-				-1.2
6,246,640	-				+0.4
6,246,750	-		AO353_28690	0.13	-0.5
6,246,750	-		AO353_28690	0.13	+0.2
6,246,750	-		AO353_28690	0.13	-1.2
6,246,785	+		AO353_28690	0.17	-0.8
6,246,785	+		AO353_28690	0.17	+0.2
6,246,785	+		AO353_28690	0.17	+0.8
6,246,785	+		AO353_28690	0.17	+0.5
6,246,785	+		AO353_28690	0.17	-0.2
6,246,785	+		AO353_28690	0.17	-0.0
6,246,786	-		AO353_28690	0.17	-2.0
6,246,786	-		AO353_28690	0.17	+0.2
6,246,786	-		AO353_28690	0.17	+2.4
6,246,786	-		AO353_28690	0.17	-1.8
6,246,786	-		AO353_28690	0.17	+1.3
6,246,834	-		AO353_28690	0.23	+2.1
6,246,841	+		AO353_28690	0.23	+0.6
6,246,841	+		AO353_28690	0.23	-1.1
6,246,841	+		AO353_28690	0.23	-0.2
6,246,842	-		AO353_28690	0.24	+4.5
6,246,842	-		AO353_28690	0.24	+0.8
6,246,842	-		AO353_28690	0.24	+0.2
6,246,842	-		AO353_28690	0.24	+0.8
6,246,842	-		AO353_28690	0.24	-0.3
6,246,842	-		AO353_28690	0.24	-0.2
6,246,907	-		AO353_28690	0.31	-1.5
6,246,943	+		AO353_28690	0.35	+0.4
6,246,943	+		AO353_28690	0.35	+0.8
6,246,943	+		AO353_28690	0.35	+1.4
6,246,944	-		AO353_28690	0.35	+1.4
6,246,959	+		AO353_28690	0.37	-0.8
6,246,959	+		AO353_28690	0.37	+0.4
6,246,959	+		AO353_28690	0.37	+1.6
6,246,960	-		AO353_28690	0.37	+1.1
6,246,978	-		AO353_28690	0.39	-0.9
6,247,069	-		AO353_28690	0.50	+0.8
6,247,141	-		AO353_28690	0.58	+0.4
6,247,141	-		AO353_28690	0.58	-1.8
6,247,150	+		AO353_28690	0.59	-0.5
6,247,150	+		AO353_28690	0.59	-0.5
6,247,150	+		AO353_28690	0.59	-0.5
6,247,151	-				+0.5
6,247,151	-		AO353_28690	0.60	+1.4
6,247,151	-		AO353_28690	0.60	-1.2
6,247,151	-		AO353_28690	0.60	-0.5
6,247,151	-		AO353_28690	0.60	+1.8
6,247,155	+		AO353_28690	0.60	-0.5
6,247,155	+		AO353_28690	0.60	+1.0