Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28600

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
6,229,086	-		AO353_28595	0.25	+0.5
6,229,126	+		AO353_28595	0.28	-0.4
6,229,126	+		AO353_28595	0.28	+0.2
6,229,127	-		AO353_28595	0.28	+0.8
6,229,127	-		AO353_28595	0.28	+0.2
6,229,127	-		AO353_28595	0.28	+1.0
6,229,139	-		AO353_28595	0.29	+0.1
6,229,162	+		AO353_28595	0.31	+0.2
6,229,162	+		AO353_28595	0.31	-0.2
6,229,163	-		AO353_28595	0.31	-0.2
6,229,163	-		AO353_28595	0.31	+0.4
6,229,163	-		AO353_28595	0.31	-0.2
6,229,163	-		AO353_28595	0.31	-2.2
6,229,200	+		AO353_28595	0.34	+0.8
6,229,200	+		AO353_28595	0.34	-0.5
6,229,200	+		AO353_28595	0.34	+0.2
6,229,202	+		AO353_28595	0.34	-2.2
6,229,202	+		AO353_28595	0.34	-0.5
6,229,202	+		AO353_28595	0.34	-1.5
6,229,202	+		AO353_28595	0.34	-1.2
6,229,203	-		AO353_28595	0.34	+0.5
6,229,203	-		AO353_28595	0.34	-0.9
6,229,203	-		AO353_28595	0.34	+0.6
6,229,203	-		AO353_28595	0.34	-2.2
6,229,203	-		AO353_28595	0.34	-0.0
6,229,264	+		AO353_28595	0.39	-0.8
6,229,327	+		AO353_28595	0.44	+0.4
6,229,328	-		AO353_28595	0.44	-2.7
6,229,328	-		AO353_28595	0.44	+0.1
6,229,330	+		AO353_28595	0.45	-0.6
6,229,330	+		AO353_28595	0.45	+0.2
6,229,330	+		AO353_28595	0.45	+1.8
6,229,331	-		AO353_28595	0.45	+0.1
6,229,331	-		AO353_28595	0.45	-0.0
6,229,354	-		AO353_28595	0.47	-0.8
6,229,354	-		AO353_28595	0.47	+1.8
6,229,363	+		AO353_28595	0.47	-0.1
6,229,363	+		AO353_28595	0.47	-1.4
6,229,363	+		AO353_28595	0.47	+1.8
6,229,434	+		AO353_28595	0.53	-2.0
6,229,434	+		AO353_28595	0.53	-0.9
6,229,435	-		AO353_28595	0.53	+0.8
6,229,435	-		AO353_28595	0.53	+1.1
6,229,435	-		AO353_28595	0.53	+0.3
6,229,435	-		AO353_28595	0.53	-1.3
6,229,435	-		AO353_28595	0.53	+0.2
6,229,435	-		AO353_28595	0.53	+0.8
6,229,435	-		AO353_28595	0.53	-1.2
6,229,436	+		AO353_28595	0.53	-0.2
6,229,436	+		AO353_28595	0.53	+1.3
6,229,437	-		AO353_28595	0.53	-1.1
6,229,437	-		AO353_28595	0.53	-0.6
6,229,437	-		AO353_28595	0.53	+0.4
6,229,437	-		AO353_28595	0.53	-1.2
6,229,455	-		AO353_28595	0.55	+0.8
6,229,483	+		AO353_28595	0.57	-0.2
6,229,571	-		AO353_28595	0.65	-0.2
6,229,587	+		AO353_28595	0.66	+0.1
6,229,587	+		AO353_28595	0.66	-1.0
6,229,587	+		AO353_28595	0.66	-0.2
6,229,588	-		AO353_28595	0.66	-0.8
6,229,631	+		AO353_28595	0.69	+0.2
6,229,631	+		AO353_28595	0.69	+0.5
6,229,631	+		AO353_28595	0.69	-1.5
6,229,631	+		AO353_28595	0.69	+0.2
6,229,631	+		AO353_28595	0.69	-1.0
6,229,631	+		AO353_28595	0.69	+1.0
6,229,631	+		AO353_28595	0.69	-0.2
6,229,632	-		AO353_28595	0.70	+0.5
6,229,632	-		AO353_28595	0.70	+0.4
6,229,632	-		AO353_28595	0.70	+1.0
6,229,632	-		AO353_28595	0.70	+0.8
6,229,651	+		AO353_28595	0.71	-1.2
6,229,651	+		AO353_28595	0.71	-0.3
6,229,651	+		AO353_28595	0.71	-0.2
6,229,652	-		AO353_28595	0.71	-0.2
6,229,652	-		AO353_28595	0.71	+1.0
6,229,652	-		AO353_28595	0.71	-2.0
6,229,652	-		AO353_28595	0.71	-2.6
6,229,652	-		AO353_28595	0.71	+0.1
6,229,652	-		AO353_28595	0.71	-2.0
6,229,652	-		AO353_28595	0.71	-0.9
6,229,652	-		AO353_28595	0.71	-2.2
6,229,761	-		AO353_28595	0.80	+0.4
6,229,761	-		AO353_28595	0.80	-0.8
6,229,767	+		AO353_28595	0.81	+0.8
6,229,767	+		AO353_28595	0.81	+2.1
6,229,767	+		AO353_28595	0.81	+0.8
6,229,767	+		AO353_28595	0.81	+0.4
6,229,767	+		AO353_28595	0.81	+0.1
6,229,767	+		AO353_28595	0.81	+0.4
6,229,767	+		AO353_28595	0.81	+0.8
6,229,767	+		AO353_28595	0.81	-0.4
6,229,767	+		AO353_28595	0.81	+1.8
6,229,768	-		AO353_28595	0.81	+3.2
6,229,768	-		AO353_28595	0.81	-1.2
6,229,768	-		AO353_28595	0.81	-1.5
6,229,768	-		AO353_28595	0.81	-0.8
6,229,815	-		AO353_28595	0.85	-1.2
6,229,869	+		AO353_28595	0.89	+0.8
6,229,869	+		AO353_28595	0.89	+0.8
6,229,882	+				-1.7
6,229,932	+				-0.9
6,229,933	-				-0.2
6,229,933	-				-2.0
6,229,933	-				+0.6
6,229,939	+				+0.8
6,229,939	+				-0.6
6,229,939	+				-1.2
6,229,939	+				-0.2
6,229,940	-				-0.2
6,229,940	-				-1.5
6,229,940	-				+0.3
6,229,966	+				+1.6
6,229,966	+				+0.8
6,229,966	+				+0.0
6,229,966	+				+0.6
6,229,966	+				+1.1
6,229,966	+				-2.2
6,229,966	+				+0.5
6,229,966	+				-0.5
6,229,966	+				+0.4
6,229,966	+				+0.4
6,229,966	+				-0.6
6,229,967	-				-1.8
6,229,967	-				+0.2
6,229,967	-				+0.8
6,229,967	-				-1.8
6,229,967	-				-2.6
6,229,967	-				-1.2
6,229,967	-				-0.7
6,229,967	-				+0.1
6,229,967	-				+1.3
6,229,967	-				+0.2
6,229,998	+				+0.6
6,229,998	+				+1.6
6,230,044	+				-0.1
6,230,044	+				-0.7
6,230,045	-				+0.4
6,230,045	-				-0.4
6,230,088	+				+0.3
6,230,088	+				-1.8
6,230,088	+				-0.6
6,230,089	-				+0.0
6,230,089	-				-0.8
6,230,089	-				+0.6
6,230,092	+				-1.0
6,230,092	+				+2.0
6,230,092	+				-1.5
6,230,092	+				-0.4
6,230,092	+				-1.8
6,230,092	+				-1.5
6,230,092	+				+1.2
6,230,092	+				-1.4
6,230,093	-				-0.7
6,230,093	-				+0.0
6,230,093	-				+0.3
6,230,093	-				+0.8
6,230,093	-				-0.6
6,230,093	-				+0.2
6,230,158	+		AO353_28600	0.10	-1.0
6,230,159	-		AO353_28600	0.10	+0.4
6,230,222	+		AO353_28600	0.18	+0.0
6,230,223	-		AO353_28600	0.18	-1.1
6,230,223	-		AO353_28600	0.18	-0.2
6,230,223	-		AO353_28600	0.18	-0.4
6,230,249	-		AO353_28600	0.22	-0.5
6,230,249	-		AO353_28600	0.22	-0.2
6,230,249	-		AO353_28600	0.22	+0.2
6,230,249	-		AO353_28600	0.22	-0.8
6,230,249	-		AO353_28600	0.22	+2.4
6,230,249	-		AO353_28600	0.22	-1.8
6,230,249	-		AO353_28600	0.22	+2.1
6,230,249	-		AO353_28600	0.22	+0.0
6,230,321	+		AO353_28600	0.31	+1.1
6,230,321	+		AO353_28600	0.31	-1.7
6,230,321	+		AO353_28600	0.31	+1.7
6,230,321	+		AO353_28600	0.31	-0.2
6,230,321	+		AO353_28600	0.31	+0.3
6,230,322	-		AO353_28600	0.31	+0.8
6,230,322	-		AO353_28600	0.31	+0.6
6,230,322	-		AO353_28600	0.31	+1.0
6,230,322	-		AO353_28600	0.31	+0.4
6,230,329	+		AO353_28600	0.32	-0.1
6,230,329	+		AO353_28600	0.32	+0.4
6,230,330	-		AO353_28600	0.32	-2.0
6,230,335	+		AO353_28600	0.32	-2.4
6,230,336	-		AO353_28600	0.33	+0.6
6,230,352	-		AO353_28600	0.35	+0.2
6,230,352	-		AO353_28600	0.35	+0.0
6,230,352	-		AO353_28600	0.35	+0.4
6,230,353	+		AO353_28600	0.35	-0.3
6,230,353	+		AO353_28600	0.35	-0.5
6,230,353	+		AO353_28600	0.35	+1.8
6,230,353	+		AO353_28600	0.35	+0.9
6,230,353	+		AO353_28600	0.35	-0.0
6,230,353	+		AO353_28600	0.35	-0.7
6,230,353	+		AO353_28600	0.35	-0.6
6,230,353	+		AO353_28600	0.35	+0.0
6,230,353	+		AO353_28600	0.35	+0.8
6,230,353	+		AO353_28600	0.35	-0.8
6,230,353	+		AO353_28600	0.35	+0.6
6,230,353	+		AO353_28600	0.35	+0.2
6,230,353	+		AO353_28600	0.35	+0.2
6,230,353	+		AO353_28600	0.35	+3.6
6,230,353	+		AO353_28600	0.35	-0.1
6,230,353	+		AO353_28600	0.35	+0.4
6,230,353	+		AO353_28600	0.35	+0.2
6,230,353	+		AO353_28600	0.35	+0.5
6,230,353	+		AO353_28600	0.35	+0.4
6,230,353	+		AO353_28600	0.35	-0.2
6,230,353	+		AO353_28600	0.35	-0.0
6,230,354	-		AO353_28600	0.35	-0.6
6,230,354	-		AO353_28600	0.35	+0.6
6,230,354	-		AO353_28600	0.35	-0.6
6,230,354	-		AO353_28600	0.35	+3.1
6,230,354	-		AO353_28600	0.35	-0.2
6,230,354	-		AO353_28600	0.35	+0.2
6,230,354	-		AO353_28600	0.35	-1.7
6,230,354	-		AO353_28600	0.35	+0.4
6,230,354	-		AO353_28600	0.35	-0.4
6,230,354	-		AO353_28600	0.35	+1.0
6,230,354	-		AO353_28600	0.35	-1.5
6,230,354	-		AO353_28600	0.35	+1.8
6,230,354	-		AO353_28600	0.35	+0.1
6,230,354	-		AO353_28600	0.35	+0.0
6,230,366	-		AO353_28600	0.36	-0.1
6,230,378	+		AO353_28600	0.38	-0.6
6,230,378	+		AO353_28600	0.38	-1.4
6,230,378	+		AO353_28600	0.38	-0.4
6,230,378	+		AO353_28600	0.38	-2.0
6,230,378	+		AO353_28600	0.38	+0.0
6,230,379	-		AO353_28600	0.38	+1.1
6,230,379	-		AO353_28600	0.38	-1.8
6,230,379	-		AO353_28600	0.38	+0.2
6,230,379	-		AO353_28600	0.38	+0.8
6,230,379	-		AO353_28600	0.38	-0.1
6,230,382	+		AO353_28600	0.38	+0.1
6,230,382	+		AO353_28600	0.38	+1.4
6,230,382	+		AO353_28600	0.38	+0.2
6,230,382	+		AO353_28600	0.38	+0.3
6,230,382	+		AO353_28600	0.38	-1.9
6,230,382	+		AO353_28600	0.38	+0.2
6,230,383	-		AO353_28600	0.38	-1.5
6,230,383	-		AO353_28600	0.38	+0.3
6,230,383	-		AO353_28600	0.38	+1.1
6,230,383	-		AO353_28600	0.38	-0.4
6,230,413	+		AO353_28600	0.42	-0.6
6,230,413	+		AO353_28600	0.42	+2.5
6,230,414	-		AO353_28600	0.42	-1.1
6,230,414	-		AO353_28600	0.42	+1.6
6,230,414	-		AO353_28600	0.42	+0.8
6,230,474	+		AO353_28600	0.50	+0.2
6,230,474	+		AO353_28600	0.50	+0.4
6,230,474	+		AO353_28600	0.50	-1.0
6,230,474	+		AO353_28600	0.50	-0.1
6,230,474	+		AO353_28600	0.50	-0.8
6,230,474	+		AO353_28600	0.50	-0.5
6,230,474	+		AO353_28600	0.50	-1.2
6,230,474	+		AO353_28600	0.50	+1.0
6,230,474	+		AO353_28600	0.50	+0.4
6,230,474	+		AO353_28600	0.50	+0.8
6,230,474	+		AO353_28600	0.50	-0.0
6,230,474	+		AO353_28600	0.50	-0.4
6,230,474	+		AO353_28600	0.50	+0.8
6,230,474	+		AO353_28600	0.50	+1.0
6,230,474	+		AO353_28600	0.50	-1.2
6,230,474	+		AO353_28600	0.50	-0.2
6,230,474	+		AO353_28600	0.50	+0.8
6,230,474	+		AO353_28600	0.50	+1.2
6,230,474	+		AO353_28600	0.50	-1.4
6,230,474	+		AO353_28600	0.50	+0.8
6,230,474	+		AO353_28600	0.50	-0.2
6,230,475	-		AO353_28600	0.50	-0.2
6,230,475	-		AO353_28600	0.50	+0.4
6,230,475	-		AO353_28600	0.50	-0.2
6,230,475	-		AO353_28600	0.50	+1.4
6,230,475	-		AO353_28600	0.50	+0.5
6,230,475	-		AO353_28600	0.50	+0.3
6,230,475	-		AO353_28600	0.50	+0.0
6,230,475	-		AO353_28600	0.50	+0.2
6,230,475	-		AO353_28600	0.50	-2.2
6,230,475	-		AO353_28600	0.50	-0.8
6,230,475	-		AO353_28600	0.50	-0.8
6,230,475	-		AO353_28600	0.50	-0.4
6,230,475	-		AO353_28600	0.50	-2.0
6,230,475	-		AO353_28600	0.50	+0.6
6,230,475	-		AO353_28600	0.50	-2.0
6,230,475	-		AO353_28600	0.50	-0.7
6,230,475	-		AO353_28600	0.50	-0.2
6,230,475	-		AO353_28600	0.50	-0.5
6,230,876	+				-1.2
6,230,876	+				-0.5
6,230,876	+				-0.6
6,230,877	-				-0.2
6,230,877	-				+0.8
6,230,877	-				+0.5
6,230,878	+				+0.0
6,230,879	-				+0.5
6,230,956	+				+1.3
6,230,956	+				-1.1
6,230,957	-				+0.2
6,230,963	+				+1.8
6,230,963	+				+1.1
6,230,964	-				+1.2
6,230,964	-				-0.4
6,230,964	-				-0.0
6,230,964	-				-0.2
6,230,994	+				-0.4
6,230,995	-				+0.2
6,230,995	-				-0.6
6,230,995	-				+0.1
6,230,995	-				+0.1
6,231,017	+				+1.5
6,231,017	+				-0.1
6,231,017	+				-1.4
6,231,018	-				+1.4
6,231,018	-				-0.8
6,231,033	+				-1.3
6,231,033	+				+0.4
6,231,033	+				+0.4
6,231,034	-				-0.4
6,231,034	-				-0.4
6,231,169	+		AO353_28605	0.23	-0.2
6,231,170	-		AO353_28605	0.23	+1.1
6,231,191	-		AO353_28605	0.25	+1.5
6,231,306	+		AO353_28605	0.38	-2.5
6,231,306	+		AO353_28605	0.38	-1.2
6,231,306	+		AO353_28605	0.38	-0.6
6,231,306	+		AO353_28605	0.38	+1.1
6,231,307	-		AO353_28605	0.38	+1.4
6,231,350	+		AO353_28605	0.42	+0.8
6,231,350	+		AO353_28605	0.42	+0.8
6,231,367	+		AO353_28605	0.44	-0.6
6,231,367	+		AO353_28605	0.44	-0.8
6,231,367	+		AO353_28605	0.44	+3.1
6,231,367	+		AO353_28605	0.44	-0.6
6,231,368	-		AO353_28605	0.44	+0.5
6,231,368	-		AO353_28605	0.44	-0.4
6,231,401	+		AO353_28605	0.48	+0.8
6,231,401	+		AO353_28605	0.48	-1.1
6,231,401	+		AO353_28605	0.48	-0.8
6,231,402	-		AO353_28605	0.48	-2.8
6,231,402	-		AO353_28605	0.48	-1.5
6,231,402	-		AO353_28605	0.48	+0.2
6,231,482	+		AO353_28605	0.56	-0.1
6,231,482	+		AO353_28605	0.56	-0.8
6,231,482	+		AO353_28605	0.56	+0.8
6,231,483	-		AO353_28605	0.56	-2.2
6,231,483	-		AO353_28605	0.56	+0.8
6,231,483	-		AO353_28605	0.56	-1.7
6,231,483	-		AO353_28605	0.56	+1.8
6,231,483	-		AO353_28605	0.56	+0.4
6,231,483	-		AO353_28605	0.56	+0.8
6,231,520	+		AO353_28605	0.60	+0.5
6,231,521	-		AO353_28605	0.60	+0.6
6,231,521	-		AO353_28605	0.60	-0.2
6,231,560	+		AO353_28605	0.65	-0.2
6,231,560	+		AO353_28605	0.65	+0.2
6,231,560	+		AO353_28605	0.65	-0.2
6,231,560	+		AO353_28605	0.65	-0.2
6,231,561	-		AO353_28605	0.65	+2.4
6,231,570	+		AO353_28605	0.66	-0.2
6,231,570	+		AO353_28605	0.66	+0.4
6,231,570	+		AO353_28605	0.66	+0.2
6,231,571	-		AO353_28605	0.66	+0.6
6,231,608	+		AO353_28605	0.70	+0.9
6,231,608	+		AO353_28605	0.70	+0.1
6,231,609	-		AO353_28605	0.70	-1.0
6,231,609	-		AO353_28605	0.70	-0.5
6,231,609	-		AO353_28605	0.70	-1.0
6,231,645	+		AO353_28605	0.74	+1.1
6,231,645	+		AO353_28605	0.74	+1.1
6,231,645	+		AO353_28605	0.74	+0.2
6,231,646	-		AO353_28605	0.74	+0.3
6,231,646	-		AO353_28605	0.74	-0.4
6,231,646	-		AO353_28605	0.74	+0.1