Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27495

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
5,999,906	+				-0.6
5,999,980	-				+0.0
5,999,980	-				-0.2
5,999,980	-				-0.8
5,999,981	+				+1.4
5,999,982	-				-0.8
5,999,982	-				+0.1
5,999,993	-				-1.2
6,000,002	-				+0.6
6,000,002	-				-1.4
6,000,002	-				+0.5
6,000,002	-				-0.2
6,000,002	-				-1.8
6,000,002	-				-1.2
6,000,039	+				-0.6
6,000,059	+				-1.0
6,000,060	-				-0.9
6,000,146	+		AO353_27490	0.15	-2.2
6,000,329	-		AO353_27490	0.50	-0.8
6,000,352	+		AO353_27490	0.54	+1.2
6,000,352	+		AO353_27490	0.54	+0.2
6,000,352	+		AO353_27490	0.54	-1.0
6,000,352	+		AO353_27490	0.54	-0.2
6,000,352	+		AO353_27490	0.54	+0.5
6,000,352	+		AO353_27490	0.54	-0.4
6,000,352	+		AO353_27490	0.54	+0.2
6,000,353	-		AO353_27490	0.55	+0.8
6,000,353	-		AO353_27490	0.55	+0.4
6,000,353	-		AO353_27490	0.55	+0.3
6,000,353	-		AO353_27490	0.55	+0.7
6,000,353	-				+2.4
6,000,353	-		AO353_27490	0.55	-1.2
6,000,355	+		AO353_27490	0.55	-1.0
6,000,355	+		AO353_27490	0.55	+0.8
6,000,355	+		AO353_27490	0.55	+0.6
6,000,355	+		AO353_27490	0.55	-1.1
6,000,356	-		AO353_27490	0.55	+0.2
6,000,356	-		AO353_27490	0.55	+0.6
6,000,418	+		AO353_27490	0.67	-0.0
6,000,418	+		AO353_27490	0.67	+0.8
6,000,419	-		AO353_27490	0.67	+0.1
6,000,419	-		AO353_27490	0.67	-0.7
6,000,419	-		AO353_27490	0.67	+1.0
6,000,419	-		AO353_27490	0.67	+1.5
6,000,419	-		AO353_27490	0.67	+1.8
6,000,419	-		AO353_27490	0.67	-0.6
6,000,419	-		AO353_27490	0.67	+0.1
6,000,421	+		AO353_27490	0.68	+0.3
6,000,421	+		AO353_27490	0.68	+2.4
6,000,421	+		AO353_27490	0.68	+0.1
6,000,422	-		AO353_27490	0.68	-1.0
6,000,422	-		AO353_27490	0.68	+1.4
6,000,422	-		AO353_27490	0.68	+1.4
6,000,500	-		AO353_27490	0.83	+0.5
6,000,593	+				+0.6
6,000,594	-				-1.5
6,000,631	+				-0.1
6,000,639	-				+0.1
6,000,639	-				+0.3
6,000,666	+				-1.2
6,000,666	+				-2.0
6,000,666	+				+1.3
6,000,666	+				+0.5
6,000,666	+				+1.2
6,000,667	-				-0.4
6,000,667	-				-2.8
6,000,667	-				+1.5
6,000,705	+				-0.8
6,000,705	+				-0.2
6,000,911	+				+0.5
6,000,918	-				-1.2
6,001,092	+		AO353_27495	0.19	-0.2
6,001,092	+		AO353_27495	0.19	-0.8
6,001,092	+		AO353_27495	0.19	+0.3
6,001,092	+		AO353_27495	0.19	+0.8
6,001,092	+		AO353_27495	0.19	+0.8
6,001,092	+		AO353_27495	0.19	+0.5
6,001,092	+		AO353_27495	0.19	+0.0
6,001,092	+		AO353_27495	0.19	+1.0
6,001,092	+		AO353_27495	0.19	-1.4
6,001,092	+		AO353_27495	0.19	+0.8
6,001,093	-		AO353_27495	0.19	-0.6
6,001,093	-		AO353_27495	0.19	-0.5
6,001,093	-		AO353_27495	0.19	+2.1
6,001,093	-		AO353_27495	0.19	-2.2
6,001,093	-		AO353_27495	0.19	+1.3
6,001,093	-		AO353_27495	0.19	-0.9
6,001,093	-		AO353_27495	0.19	+2.1
6,001,093	-		AO353_27495	0.19	+0.8
6,001,093	-		AO353_27495	0.19	+1.0
6,001,093	-		AO353_27495	0.19	-1.5
6,001,093	-				-0.8
6,001,093	-		AO353_27495	0.19	+0.8
6,001,286	+		AO353_27495	0.31	+0.1
6,001,286	+		AO353_27495	0.31	+0.8
6,001,286	+		AO353_27495	0.31	+1.4
6,001,286	+		AO353_27495	0.31	+0.6
6,001,286	+		AO353_27495	0.31	-1.8
6,001,286	+		AO353_27495	0.31	+1.8
6,001,286	+		AO353_27495	0.31	-1.0
6,001,287	-		AO353_27495	0.31	+0.2
6,001,287	-		AO353_27495	0.31	-0.7
6,001,287	-		AO353_27495	0.31	+1.0
6,001,287	-		AO353_27495	0.31	+0.2
6,001,287	-		AO353_27495	0.31	+0.8
6,001,287	-		AO353_27495	0.31	+0.8
6,001,287	-		AO353_27495	0.31	+0.5
6,001,287	-		AO353_27495	0.31	-0.3
6,001,287	-		AO353_27495	0.31	-0.6
6,001,287	-		AO353_27495	0.31	-0.2
6,001,287	-		AO353_27495	0.31	-1.2
6,001,346	+		AO353_27495	0.35	-1.8
6,001,346	+		AO353_27495	0.35	-0.5
6,001,432	+		AO353_27495	0.41	+1.6
6,001,433	-		AO353_27495	0.41	-2.4
6,001,433	-		AO353_27495	0.41	+0.8
6,001,442	+		AO353_27495	0.41	-0.2
6,001,491	+		AO353_27495	0.45	-0.2
6,001,510	+		AO353_27495	0.46	-0.1
6,001,510	+		AO353_27495	0.46	+0.8
6,001,511	-		AO353_27495	0.46	-1.8
6,001,511	-		AO353_27495	0.46	+0.8
6,001,518	+		AO353_27495	0.46	+1.4
6,001,519	-		AO353_27495	0.46	-0.8
6,001,524	+		AO353_27495	0.47	+1.4
6,001,524	+		AO353_27495	0.47	-0.5
6,001,524	+		AO353_27495	0.47	+1.4
6,001,524	+		AO353_27495	0.47	+0.8
6,001,524	+		AO353_27495	0.47	+2.5
6,001,525	-		AO353_27495	0.47	-2.0
6,001,550	-		AO353_27495	0.48	+0.8
6,001,550	-		AO353_27495	0.48	-0.9
6,001,684	+		AO353_27495	0.57	+1.1
6,001,684	+		AO353_27495	0.57	+1.7
6,001,684	+		AO353_27495	0.57	+0.8
6,001,685	-		AO353_27495	0.57	-1.2
6,001,685	-		AO353_27495	0.57	-1.2
6,001,685	-		AO353_27495	0.57	+0.5
6,001,685	-		AO353_27495	0.57	-0.6
6,001,978	+		AO353_27495	0.76	-0.7
6,001,978	+		AO353_27495	0.76	-1.2
6,001,978	+		AO353_27495	0.76	+0.1
6,001,978	+		AO353_27495	0.76	+0.5
6,001,979	-		AO353_27495	0.76	+0.3
6,001,979	-		AO353_27495	0.76	-0.3
6,002,068	+		AO353_27495	0.82	-1.2
6,002,075	+		AO353_27495	0.82	+0.5
6,002,075	+		AO353_27495	0.82	-0.5
6,002,075	+		AO353_27495	0.82	-0.4
6,002,075	+		AO353_27495	0.82	+0.9
6,002,075	+		AO353_27495	0.82	-0.8
6,002,075	+		AO353_27495	0.82	-0.6
6,002,075	+		AO353_27495	0.82	+1.8
6,002,076	-		AO353_27495	0.83	-0.2
6,002,076	-		AO353_27495	0.83	-1.0
6,002,076	-		AO353_27495	0.83	+0.5
6,002,076	-		AO353_27495	0.83	-0.4
6,002,076	-		AO353_27495	0.83	-2.8
6,002,076	-		AO353_27495	0.83	+0.2
6,002,076	-		AO353_27495	0.83	-1.0
6,002,076	-		AO353_27495	0.83	+0.4
6,002,076	-		AO353_27495	0.83	+1.5
6,002,076	-		AO353_27495	0.83	+1.9
6,002,076	-		AO353_27495	0.83	-1.0
6,002,076	-		AO353_27495	0.83	-0.2
6,002,076	-		AO353_27495	0.83	+0.8
6,002,102	+		AO353_27495	0.84	+0.2
6,002,102	+		AO353_27495	0.84	+0.6
6,002,103	-		AO353_27495	0.84	+0.8
6,002,103	-		AO353_27495	0.84	+2.4
6,002,103	-		AO353_27495	0.84	+1.0
6,002,103	-		AO353_27495	0.84	-1.2
6,002,103	-		AO353_27495	0.84	-0.2
6,002,103	-		AO353_27495	0.84	+1.6
6,002,103	-		AO353_27495	0.84	-0.0
6,002,183	+		AO353_27495	0.89	+0.6
6,002,183	+		AO353_27495	0.89	+1.4
6,002,184	-		AO353_27495	0.90	+2.6
6,002,184	-		AO353_27495	0.90	-1.1
6,002,355	+				+0.3
6,002,384	-				+0.6
6,002,384	-				+0.8
6,002,387	+				-0.4
6,002,388	-				-1.2
6,002,403	-				-0.7
6,002,416	+				+1.5
6,002,416	+				-0.8
6,002,452	+				-0.4
6,002,498	-				-0.5
6,002,534	-				+0.8
6,002,564	+				+0.6
6,002,583	+				+0.2
6,002,583	+				+0.0
6,002,584	-				+0.0
6,002,584	-				+0.2
6,002,587	+				+0.6
6,002,601	+				-0.8
6,002,601	+				+0.2
6,002,602	-				-0.8
6,002,637	+				+0.5
6,002,637	+				-2.2
6,002,637	+				+0.2
6,002,637	+				-0.8
6,002,637	+				-0.4
6,002,638	-				-0.2
6,002,638	-				-2.9
6,002,638	-				-0.3
6,002,657	+				-0.4
6,002,658	-				+0.6
6,002,658	-				+0.5
6,002,749	+		AO353_27500	0.48	-0.5
6,002,765	+		AO353_27500	0.57	-0.7
6,002,766	-		AO353_27500	0.57	-1.2
6,002,766	-		AO353_27500	0.57	-2.0
6,002,766	-		AO353_27500	0.57	-0.8
6,002,796	-		AO353_27500	0.73	+2.4
6,002,796	-		AO353_27500	0.73	+0.2
6,002,844	+				-1.2
6,002,844	+				-1.0
6,002,845	-				-1.4
6,002,845	-				+2.1
6,002,882	+				+1.4
6,002,883	-				-0.8
6,002,886	+				-1.1
6,002,886	+				+1.0
6,002,886	+				-0.2
6,002,886	+				+0.8
6,002,886	+				-1.2
6,002,886	+				-0.0
6,002,887	-				-0.6
6,002,918	+				-1.2
6,002,991	+		AO353_27505	0.16	-1.3
6,002,991	+		AO353_27505	0.16	-0.1
6,002,992	-		AO353_27505	0.17	+0.2
6,002,992	-		AO353_27505	0.17	-1.4
6,002,992	-		AO353_27505	0.17	+0.8
6,002,992	-		AO353_27505	0.17	-0.4
6,003,016	-		AO353_27505	0.20	-0.8
6,003,079	+		AO353_27505	0.30	-0.2
6,003,079	+		AO353_27505	0.30	-0.2
6,003,079	+		AO353_27505	0.30	+0.7
6,003,079	+		AO353_27505	0.30	-1.4
6,003,079	+		AO353_27505	0.30	-1.7
6,003,080	-		AO353_27505	0.30	-1.2
6,003,080	-		AO353_27505	0.30	+0.8
6,003,080	-		AO353_27505	0.30	-1.2
6,003,080	-		AO353_27505	0.30	-0.0
6,003,081	+		AO353_27505	0.31	+0.0
6,003,081	+		AO353_27505	0.31	-1.8
6,003,081	+		AO353_27505	0.31	+0.8
6,003,081	+		AO353_27505	0.31	-0.2
6,003,081	+		AO353_27505	0.31	+0.8
6,003,081	+		AO353_27505	0.31	-1.8
6,003,081	+		AO353_27505	0.31	+0.9
6,003,081	+		AO353_27505	0.31	+1.5
6,003,082	-		AO353_27505	0.31	+1.2
6,003,082	-		AO353_27505	0.31	+0.8
6,003,082	-		AO353_27505	0.31	-0.2
6,003,082	-		AO353_27505	0.31	+0.8
6,003,082	-		AO353_27505	0.31	+1.0
6,003,082	-		AO353_27505	0.31	-0.5
6,003,082	-		AO353_27505	0.31	-0.8
6,003,082	-		AO353_27505	0.31	+0.1
6,003,082	-		AO353_27505	0.31	+1.5
6,003,085	+		AO353_27505	0.31	+0.4
6,003,085	+		AO353_27505	0.31	+0.1
6,003,085	+		AO353_27505	0.31	-0.4
6,003,085	+		AO353_27505	0.31	-0.4
6,003,085	+		AO353_27505	0.31	+1.0
6,003,085	+		AO353_27505	0.31	-0.5
6,003,085	+		AO353_27505	0.31	-0.0
6,003,085	+		AO353_27505	0.31	-2.5
6,003,085	+		AO353_27505	0.31	+0.6
6,003,085	+		AO353_27505	0.31	-0.5
6,003,085	+		AO353_27505	0.31	+1.5
6,003,085	+		AO353_27505	0.31	+0.4
6,003,085	+		AO353_27505	0.31	-0.2
6,003,085	+		AO353_27505	0.31	+0.1
6,003,086	-		AO353_27505	0.31	+0.7
6,003,086	-		AO353_27505	0.31	+0.8
6,003,086	-		AO353_27505	0.31	-0.8
6,003,086	-		AO353_27505	0.31	+0.8
6,003,159	+		AO353_27505	0.43	-0.0
6,003,159	+		AO353_27505	0.43	+0.8
6,003,226	+		AO353_27505	0.54	-0.4
6,003,226	+		AO353_27505	0.54	-0.4
6,003,226	+		AO353_27505	0.54	+0.0
6,003,227	-		AO353_27505	0.54	-0.1
6,003,232	+		AO353_27505	0.55	-0.4
6,003,232	+		AO353_27505	0.55	-1.0
6,003,233	-		AO353_27505	0.55	+0.5
6,003,233	-		AO353_27505	0.55	+0.1
6,003,304	+		AO353_27505	0.66	-0.8
6,003,304	+		AO353_27505	0.66	-1.4
6,003,304	+		AO353_27505	0.66	+0.8
6,003,304	+		AO353_27505	0.66	-1.2
6,003,305	-		AO353_27505	0.66	-1.5
6,003,308	+		AO353_27505	0.67	+0.3