Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_23365

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
5,121,364	+		AO353_23360	0.16	+0.3
5,121,364	+		AO353_23360	0.16	-1.9
5,121,364	+		AO353_23360	0.16	+0.2
5,121,364	+		AO353_23360	0.16	+0.7
5,121,364	+		AO353_23360	0.16	-1.0
5,121,364	+		AO353_23360	0.16	-0.9
5,121,364	+		AO353_23360	0.16	-0.1
5,121,364	+		AO353_23360	0.16	+0.4
5,121,364	+		AO353_23360	0.16	-0.6
5,121,364	+		AO353_23360	0.16	-0.2
5,121,364	+		AO353_23360	0.16	-0.2
5,121,364	+		AO353_23360	0.16	+0.1
5,121,364	+		AO353_23360	0.16	+0.4
5,121,364	+		AO353_23360	0.16	-0.9
5,121,364	+		AO353_23360	0.16	+0.5
5,121,364	+		AO353_23360	0.16	-2.5
5,121,364	+		AO353_23360	0.16	-0.3
5,121,364	+		AO353_23360	0.16	-1.6
5,121,365	-		AO353_23360	0.16	+0.9
5,121,365	-				-0.3
5,121,365	-		AO353_23360	0.16	-1.3
5,121,365	-		AO353_23360	0.16	-2.1
5,121,365	-				-0.9
5,121,365	-		AO353_23360	0.16	+0.1
5,121,365	-		AO353_23360	0.16	-1.1
5,121,365	-		AO353_23360	0.16	+0.7
5,121,365	-		AO353_23360	0.16	+0.1
5,121,365	-		AO353_23360	0.16	-0.6
5,121,414	+		AO353_23360	0.23	+0.7
5,121,414	+		AO353_23360	0.23	-1.9
5,121,414	+		AO353_23360	0.23	+0.1
5,121,414	+		AO353_23360	0.23	+0.2
5,121,415	-		AO353_23360	0.23	-0.5
5,121,415	-		AO353_23360	0.23	-0.3
5,121,415	-		AO353_23360	0.23	+0.3
5,121,512	+		AO353_23360	0.35	+0.4
5,121,512	+		AO353_23360	0.35	+0.0
5,121,513	-		AO353_23360	0.35	-2.5
5,121,576	+		AO353_23360	0.44	+1.5
5,121,577	-		AO353_23360	0.44	-0.9
5,121,657	+		AO353_23360	0.54	-0.7
5,121,657	+		AO353_23360	0.54	-0.1
5,121,658	-		AO353_23360	0.54	-0.5
5,121,761	+		AO353_23360	0.68	+0.1
5,121,875	-		AO353_23360	0.82	+1.7
5,121,875	-		AO353_23360	0.82	-0.8
5,121,915	+		AO353_23360	0.88	+0.1
5,121,916	-		AO353_23360	0.88	+0.3
5,121,916	-		AO353_23360	0.88	-0.3
5,122,002	+				-0.3
5,122,002	+				+1.2
5,122,002	+				-1.8
5,122,002	+				+0.5
5,122,003	-				-1.5
5,122,038	+				+0.2
5,122,067	+				-0.5
5,122,067	+				-1.0
5,122,067	+				+1.5
5,122,067	+				+0.3
5,122,068	-				-0.3
5,122,068	-				-2.6
5,122,068	-				-0.0
5,122,099	+				+0.7
5,122,100	-				-0.6
5,122,100	-				-0.6
5,122,100	-				+0.1
5,122,100	-				-1.7
5,122,117	+				+0.7
5,122,117	+				+1.4
5,122,138	+				+0.7
5,122,138	+				+0.4
5,122,138	+				-1.3
5,122,138	+				-0.3
5,122,138	+				+1.7
5,122,139	-				+2.3
5,122,139	-				+2.3
5,122,139	-				+0.2
5,122,152	+				-0.5
5,122,152	+				+0.2
5,122,152	+				-0.2
5,122,152	+				-0.1
5,122,152	+				-0.8
5,122,152	+				+1.4
5,122,152	+				+1.1
5,122,153	-				+2.2
5,122,153	-				-0.9
5,122,153	-				+0.7
5,122,153	-				-1.3
5,122,153	-				-0.9
5,122,153	-				+1.1
5,122,153	-				-0.3
5,122,153	-				+0.2
5,122,153	-				+1.0
5,122,373	-				-0.3
5,122,494	-		AO353_23365	0.13	-1.5
5,122,549	+		AO353_23365	0.19	-0.1
5,122,549	+		AO353_23365	0.19	+0.4
5,122,549	+		AO353_23365	0.19	+1.7
5,122,549	+		AO353_23365	0.19	+1.1
5,122,550	-		AO353_23365	0.19	-1.3
5,122,550	-		AO353_23365	0.19	-0.9
5,122,550	-		AO353_23365	0.19	-1.3
5,122,594	-		AO353_23365	0.23	-1.3
5,122,788	+		AO353_23365	0.43	-0.8
5,122,789	-		AO353_23365	0.43	-0.3
5,122,829	+		AO353_23365	0.47	+0.0
5,122,829	+		AO353_23365	0.47	-1.3
5,122,829	+		AO353_23365	0.47	-0.1
5,122,829	+		AO353_23365	0.47	+1.0
5,122,830	-		AO353_23365	0.47	+0.1
5,122,830	-		AO353_23365	0.47	+1.1
5,122,830	-		AO353_23365	0.47	-2.1
5,122,830	-		AO353_23365	0.47	+1.0
5,122,830	-		AO353_23365	0.47	-2.9
5,122,830	-		AO353_23365	0.47	-2.8
5,122,830	-		AO353_23365	0.47	+0.9
5,122,830	-		AO353_23365	0.47	-0.9
5,123,006	+		AO353_23365	0.65	+0.3
5,123,007	-		AO353_23365	0.65	-0.5
5,123,007	-		AO353_23365	0.65	-0.1
5,123,007	-		AO353_23365	0.65	-0.6
5,123,007	-		AO353_23365	0.65	-0.3
5,123,031	-		AO353_23365	0.67	-0.0
5,123,031	-		AO353_23365	0.67	-1.5
5,123,047	-		AO353_23365	0.69	+0.4
5,123,101	+		AO353_23365	0.74	-0.3
5,123,101	+		AO353_23365	0.74	+0.3
5,123,101	+		AO353_23365	0.74	+1.0
5,123,102	-		AO353_23365	0.74	-0.9
5,123,102	-		AO353_23365	0.74	+0.4
5,123,102	-		AO353_23365	0.74	+0.7
5,123,102	-		AO353_23365	0.74	+2.0
5,123,102	-		AO353_23365	0.74	+0.1
5,123,102	-		AO353_23365	0.74	-0.6
5,123,102	-		AO353_23365	0.74	+0.3
5,123,102	-		AO353_23365	0.74	+0.6
5,123,102	-		AO353_23365	0.74	-0.7
5,123,141	+		AO353_23365	0.78	+0.5
5,123,141	+		AO353_23365	0.78	-0.5
5,123,141	+		AO353_23365	0.78	+0.7
5,123,141	+		AO353_23365	0.78	-0.6
5,123,142	-		AO353_23365	0.78	-2.5
5,123,142	-		AO353_23365	0.78	-1.9
5,123,164	+		AO353_23365	0.80	-0.9
5,123,165	-		AO353_23365	0.80	-1.1
5,123,184	+		AO353_23365	0.82	-1.3
5,123,200	+		AO353_23365	0.84	+1.4
5,123,201	-		AO353_23365	0.84	+0.0
5,123,201	-		AO353_23365	0.84	-1.9
5,123,201	-		AO353_23365	0.84	-1.3
5,123,201	-		AO353_23365	0.84	+0.4
5,123,225	+		AO353_23365	0.86	+0.7
5,123,226	-		AO353_23365	0.87	+1.7
5,123,226	-		AO353_23365	0.87	-0.6
5,123,226	-		AO353_23365	0.87	-1.6
5,123,226	-		AO353_23365	0.87	+0.0
5,123,255	+		AO353_23365	0.89	-0.9
5,123,255	+		AO353_23365	0.89	+0.4
5,123,256	-		AO353_23365	0.90	-1.2
5,123,256	-		AO353_23365	0.90	-0.6
5,123,259	-		AO353_23365	0.90	-0.9
5,123,259	-		AO353_23365	0.90	-1.9
5,123,314	+				-0.9
5,123,314	+				+0.1
5,123,314	+				+0.7
5,123,314	+				-1.3
5,123,314	+				+0.1
5,123,314	+				+0.4
5,123,314	+				-1.2
5,123,314	+				-1.6
5,123,315	-				+0.4
5,123,315	-				-0.3
5,123,315	-				+1.3
5,123,315	-				+0.7
5,123,315	-				-0.3
5,123,315	-				-0.6
5,123,315	-				+0.2
5,123,320	+				-1.3
5,123,321	-				+0.7
5,123,347	+				-0.8
5,123,347	+				+0.2
5,123,348	-				-0.6
5,123,348	-				+0.2
5,123,381	+				-1.3
5,123,381	+				-1.3
5,123,381	+				+0.5
5,123,381	+				-0.3
5,123,381	+				-0.8
5,123,381	+				-0.3
5,123,381	+				-0.3
5,123,381	+				-2.1
5,123,382	-				+2.5
5,123,382	-				+0.5
5,123,382	-				-2.1
5,123,382	-				-0.1
5,123,397	+				+0.0
5,123,398	-				-0.9
5,123,401	+				+1.3
5,123,401	+				+2.3
5,123,401	+				-1.2
5,123,402	-				-0.7
5,123,402	-				-0.1
5,123,402	-				+0.7
5,123,402	-				+1.7
5,123,402	-				+0.5
5,123,402	-				-0.5
5,123,402	-				+0.7
5,123,402	-				-1.3
5,123,402	-				+1.0
5,123,402	-				+0.0
5,123,441	-				-2.1
5,123,441	-				+0.4
5,123,441	-				+1.1
5,123,443	+				+1.2
5,123,444	-				+2.3
5,123,466	-		AO353_23370	0.11	+1.1
5,123,466	-		AO353_23370	0.11	-0.3
5,123,473	+		AO353_23370	0.13	-0.3
5,123,474	-		AO353_23370	0.13	-0.1
5,123,635	-		AO353_23370	0.54	+0.7
5,123,640	+		AO353_23370	0.55	-1.1
5,123,641	-		AO353_23370	0.56	+1.3
5,123,697	+		AO353_23370	0.70	-2.6
5,123,697	+		AO353_23370	0.70	+0.7
5,123,697	+		AO353_23370	0.70	+1.7
5,123,698	-		AO353_23370	0.70	+0.4
5,123,698	-		AO353_23370	0.70	+2.1
5,123,698	-		AO353_23370	0.70	+0.5
5,123,698	-		AO353_23370	0.70	-0.1
5,123,719	+		AO353_23370	0.76	+0.1
5,123,720	-		AO353_23370	0.76	+1.4
5,123,788	-				-2.5
5,123,842	-				+0.5
5,124,023	+		AO353_23375	0.28	+0.0
5,124,023	+		AO353_23375	0.28	+0.7
5,124,024	-		AO353_23375	0.28	+0.2
5,124,024	-		AO353_23375	0.28	+2.3
5,124,090	+		AO353_23375	0.48	+0.0
5,124,091	-		AO353_23375	0.48	-0.3
5,124,117	+		AO353_23375	0.56	-0.7
5,124,117	+		AO353_23375	0.56	-0.5
5,124,117	+		AO353_23375	0.56	-0.2
5,124,118	-		AO353_23375	0.57	+0.7
5,124,174	+		AO353_23375	0.74	-0.1
5,124,174	+		AO353_23375	0.74	+0.7
5,124,174	+		AO353_23375	0.74	-0.9
5,124,175	-		AO353_23375	0.74	-0.2
5,124,222	+		AO353_23375	0.88	-0.5
5,124,222	+		AO353_23375	0.88	+1.3
5,124,222	+		AO353_23375	0.88	+1.7
5,124,222	+		AO353_23375	0.88	-1.1
5,124,223	-				-0.3
5,124,223	-		AO353_23375	0.88	+0.6
5,124,223	-		AO353_23375	0.88	+1.2
5,124,240	+				+0.1
5,124,240	+				-0.6
5,124,242	+				-1.2
5,124,242	+				+0.0
5,124,242	+				-0.5
5,124,243	-				-1.3
5,124,243	-				-0.1
5,124,243	-				+0.7
5,124,243	-				-0.6
5,124,254	+				-0.7
5,124,255	-				+0.7
5,124,272	+				+0.1
5,124,273	-				+0.5
5,124,273	-				-0.9
5,124,273	-				+0.2
5,124,276	+				+0.3
5,124,276	+				-0.3
5,124,276	+				-0.1
5,124,276	+				+0.1
5,124,277	-				+1.3
5,124,277	-				+1.0
5,124,277	-				-0.9
5,124,319	+				-0.1
5,124,319	+				-0.1
5,124,319	+				-1.3
5,124,319	+				-2.0
5,124,319	+				-0.3
5,124,320	-				-0.5
5,124,321	+				+0.1
5,124,321	+				-0.6