Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15385

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
3,399,544	+		AO353_15380	0.42	+0.2
3,399,544	+		AO353_15380	0.42	+0.6
3,399,544	+		AO353_15380	0.42	-0.3
3,399,544	+		AO353_15380	0.42	-1.5
3,399,544	+		AO353_15380	0.42	-0.6
3,399,544	+		AO353_15380	0.42	+0.1
3,399,545	-		AO353_15380	0.42	-2.2
3,399,545	-		AO353_15380	0.42	-1.9
3,399,545	-		AO353_15380	0.42	+0.0
3,399,547	+		AO353_15380	0.42	-0.1
3,399,547	+		AO353_15380	0.42	-1.2
3,399,547	+		AO353_15380	0.42	+0.1
3,399,547	+		AO353_15380	0.42	+0.4
3,399,547	+		AO353_15380	0.42	-1.0
3,399,548	-		AO353_15380	0.43	+1.8
3,399,548	-		AO353_15380	0.43	-1.2
3,399,548	-		AO353_15380	0.43	-0.6
3,399,589	+		AO353_15380	0.46	+0.1
3,399,589	+		AO353_15380	0.46	-1.2
3,399,589	+		AO353_15380	0.46	+1.1
3,399,589	+		AO353_15380	0.46	+0.7
3,399,590	-		AO353_15380	0.46	-0.1
3,399,590	-		AO353_15380	0.46	-0.5
3,399,590	-		AO353_15380	0.46	+1.4
3,399,595	+		AO353_15380	0.46	-0.5
3,399,595	+		AO353_15380	0.46	-1.7
3,399,595	+		AO353_15380	0.46	-0.9
3,399,596	-		AO353_15380	0.46	-0.5
3,399,596	-		AO353_15380	0.46	+0.2
3,399,607	+		AO353_15380	0.47	+0.4
3,399,608	-		AO353_15380	0.47	+0.4
3,399,608	-		AO353_15380	0.47	-1.2
3,399,608	-		AO353_15380	0.47	-0.9
3,399,608	-		AO353_15380	0.47	+2.1
3,399,608	-		AO353_15380	0.47	+0.1
3,399,610	+		AO353_15380	0.47	+0.7
3,399,610	+		AO353_15380	0.47	+0.3
3,399,610	+		AO353_15380	0.47	-1.5
3,399,610	+		AO353_15380	0.47	+0.7
3,399,610	+		AO353_15380	0.47	+0.1
3,399,610	+		AO353_15380	0.47	-1.7
3,399,610	+		AO353_15380	0.47	+0.4
3,399,610	+		AO353_15380	0.47	-2.7
3,399,610	+		AO353_15380	0.47	+0.5
3,399,610	+		AO353_15380	0.47	+0.5
3,399,610	+		AO353_15380	0.47	-1.1
3,399,611	-		AO353_15380	0.47	-0.6
3,399,611	-		AO353_15380	0.47	-0.5
3,399,611	-		AO353_15380	0.47	-1.1
3,399,611	-		AO353_15380	0.47	+1.7
3,399,611	-		AO353_15380	0.47	+1.7
3,399,611	-		AO353_15380	0.47	-0.5
3,399,611	-		AO353_15380	0.47	-0.4
3,399,613	+		AO353_15380	0.48	-2.2
3,399,613	+		AO353_15380	0.48	+0.5
3,399,614	-		AO353_15380	0.48	+1.8
3,399,614	-		AO353_15380	0.48	-1.5
3,399,614	-		AO353_15380	0.48	+0.1
3,399,614	-		AO353_15380	0.48	-1.2
3,399,614	-		AO353_15380	0.48	-1.6
3,399,614	-		AO353_15380	0.48	-1.6
3,399,614	-		AO353_15380	0.48	-0.6
3,399,646	+		AO353_15380	0.50	+0.5
3,399,646	+		AO353_15380	0.50	+1.7
3,399,647	+		AO353_15380	0.50	-0.0
3,399,647	-		AO353_15380	0.50	-1.2
3,399,647	-		AO353_15380	0.50	-2.1
3,399,647	-		AO353_15380	0.50	+1.1
3,399,647	-		AO353_15380	0.50	+0.7
3,399,772	+		AO353_15380	0.60	+0.3
3,399,772	+		AO353_15380	0.60	-1.7
3,399,772	+		AO353_15380	0.60	-0.9
3,399,772	+		AO353_15380	0.60	-0.7
3,399,773	-		AO353_15380	0.60	-0.4
3,399,773	-		AO353_15380	0.60	-1.6
3,399,773	-		AO353_15380	0.60	-1.7
3,399,773	-		AO353_15380	0.60	-0.9
3,399,773	-		AO353_15380	0.60	-0.4
3,399,773	-		AO353_15380	0.60	+0.1
3,399,773	-		AO353_15380	0.60	-0.3
3,399,773	-		AO353_15380	0.60	+0.9
3,399,773	-		AO353_15380	0.60	+0.6
3,400,102	+		AO353_15380	0.86	-0.6
3,400,103	-		AO353_15380	0.86	-2.2
3,400,103	-		AO353_15380	0.86	+0.1
3,400,154	+		AO353_15380	0.90	+0.6
3,400,183	+				+0.6
3,400,183	+				-0.5
3,400,183	+				+0.7
3,400,184	-				-0.5
3,400,184	-				-1.0
3,400,184	-				-0.2
3,400,184	-				-1.9
3,400,184	-				+0.8
3,400,184	-				-1.5
3,400,186	+				+1.1
3,400,186	+				-0.4
3,400,186	+				-0.1
3,400,186	+				-0.1
3,400,186	+				-0.4
3,400,186	+				+0.3
3,400,187	-				-0.8
3,400,187	-				-1.5
3,400,187	-				-1.9
3,400,187	-				+0.1
3,400,187	-				-1.1
3,400,187	-				+0.1
3,400,330	-				+1.4
3,400,360	+				+0.1
3,400,360	+				-0.5
3,400,361	-				+0.1
3,400,361	-				+0.1
3,400,361	-				+0.5
3,400,361	-				+1.9
3,400,361	-				-0.3
3,400,362	+				+0.7
3,400,362	+				+0.3
3,400,362	+				+0.1
3,400,362	+				-1.9
3,400,362	+				-2.2
3,400,363	-				+0.3
3,400,363	-				+2.6
3,400,363	-				-1.9
3,400,363	-				-0.3
3,400,363	-				+1.1
3,400,366	+				-0.5
3,400,367	-				-0.2
3,400,367	-				+0.3
3,400,367	-				+0.3
3,400,385	+				+0.9
3,400,417	+				+0.7
3,400,417	+				-0.5
3,400,417	+				+0.5
3,400,417	+				-1.0
3,400,417	+				-0.5
3,400,417	+				-1.9
3,400,417	+				+0.5
3,400,417	+				+0.5
3,400,417	+				-2.4
3,400,418	-				+0.4
3,400,418	-				+1.1
3,400,418	-				+2.4
3,400,418	-				+0.9
3,400,642	+		AO353_15385	0.56	-0.9
3,400,642	+		AO353_15385	0.56	-1.7
3,400,643	-		AO353_15385	0.56	-0.5
3,400,729	+				+1.1
3,400,729	+				+1.8
3,400,729	+				-0.5
3,400,729	+				-0.3
3,400,730	-				-0.9
3,400,730	-				+0.1
3,400,730	-				+0.5
3,400,788	+				+1.1
3,400,788	+				-0.0
3,400,788	+				-0.1
3,400,788	+				-0.3
3,400,789	-				-1.5
3,400,789	-				-0.2
3,400,789	-				-1.2
3,400,789	-				-0.3
3,400,826	-				+0.4
3,400,923	+				-0.0
3,400,923	+				-0.1
3,400,923	+				+1.1
3,400,923	+				-0.6
3,400,923	+				+0.7
3,400,924	-				+0.3
3,400,924	-				-0.7
3,400,924	-				-0.2
3,400,924	-				-0.6
3,400,924	-				+1.1
3,400,924	-				+0.4
3,400,924	-				-2.3
3,400,924	-				+0.5
3,400,924	-				+0.7
3,400,924	-				-0.9
3,400,924	-				+0.5
3,400,924	-				-1.7
3,400,924	-				-2.2
3,400,925	+				-1.2
3,400,925	+				+0.1
3,400,925	+				+0.5
3,400,925	+				+0.0
3,400,925	+				-0.3
3,400,925	+				+0.4
3,400,926	-				-0.6
3,400,926	-				+0.7
3,400,926	-				-2.8
3,400,933	+				-0.9
3,401,013	+				-2.1
3,401,013	+				+0.6
3,401,013	+				+0.3
3,401,013	+				+0.4
3,401,013	+				+2.1
3,401,013	+				+0.5
3,401,014	-				-1.4
3,401,014	-				+1.1
3,401,014	-				+0.8
3,401,014	-				+0.1
3,401,014	-				-0.3
3,401,026	+				+1.0
3,401,026	+				+0.5
3,401,026	+				+0.5
3,401,026	+				+0.1
3,401,026	+				-1.3
3,401,026	+				+3.1
3,401,026	+				+0.2
3,401,027	-				+0.6
3,401,027	-				+0.0
3,401,027	-				-2.4
3,401,550	+		AO353_15390	0.40	-0.9
3,401,550	+		AO353_15390	0.40	+0.3
3,401,550	+		AO353_15390	0.40	+0.4
3,401,550	+		AO353_15390	0.40	-0.1
3,401,550	+		AO353_15390	0.40	+0.2
3,401,550	+		AO353_15390	0.40	-0.3
3,401,551	-		AO353_15390	0.40	-0.5
3,401,551	-		AO353_15390	0.40	-2.5
3,401,551	-		AO353_15390	0.40	+0.3
3,401,551	-		AO353_15390	0.40	-0.5
3,401,551	-		AO353_15390	0.40	+1.2
3,401,551	-		AO353_15390	0.40	+0.3
3,401,551	-		AO353_15390	0.40	+0.7
3,401,551	-		AO353_15390	0.40	+0.1
3,401,664	+		AO353_15390	0.48	+0.2
3,401,665	-		AO353_15390	0.49	+1.6
3,401,665	-		AO353_15390	0.49	-1.7
3,401,665	-		AO353_15390	0.49	-2.1
3,401,665	-		AO353_15390	0.49	-0.0
3,401,665	-		AO353_15390	0.49	+0.7