Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15225

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
3,365,338	+		AO353_15220	0.18	+0.3
3,365,338	+		AO353_15220	0.18	-2.5
3,365,338	+		AO353_15220	0.18	+0.5
3,365,338	+		AO353_15220	0.18	-0.5
3,365,338	+		AO353_15220	0.18	+0.1
3,365,530	+		AO353_15220	0.37	+0.8
3,365,530	+		AO353_15220	0.37	+0.4
3,365,531	-		AO353_15220	0.37	+2.7
3,365,531	-		AO353_15220	0.37	-0.2
3,365,548	+		AO353_15220	0.39	-1.3
3,365,548	+		AO353_15220	0.39	+1.0
3,365,549	-		AO353_15220	0.39	+2.4
3,365,549	-		AO353_15220	0.39	-1.2
3,365,549	-		AO353_15220	0.39	-0.8
3,365,549	-		AO353_15220	0.39	-1.1
3,365,608	+		AO353_15220	0.45	+1.0
3,365,608	+		AO353_15220	0.45	-1.5
3,365,609	-		AO353_15220	0.45	+0.1
3,365,609	-		AO353_15220	0.45	+0.2
3,365,609	-		AO353_15220	0.45	-1.5
3,365,609	-		AO353_15220	0.45	+1.0
3,365,609	-		AO353_15220	0.45	+1.1
3,365,609	-		AO353_15220	0.45	-1.3
3,365,614	+		AO353_15220	0.46	+1.1
3,365,614	+		AO353_15220	0.46	-0.3
3,365,614	+		AO353_15220	0.46	-1.7
3,365,614	+		AO353_15220	0.46	-0.5
3,365,615	-		AO353_15220	0.46	-0.5
3,365,615	-		AO353_15220	0.46	+0.9
3,365,615	-		AO353_15220	0.46	-1.3
3,365,650	+		AO353_15220	0.49	-1.5
3,365,651	-		AO353_15220	0.49	+0.7
3,365,651	-		AO353_15220	0.49	+0.7
3,365,651	-		AO353_15220	0.49	+2.0
3,365,737	+		AO353_15220	0.58	-0.5
3,365,737	+		AO353_15220	0.58	+0.5
3,365,737	+		AO353_15220	0.58	+0.9
3,365,738	-		AO353_15220	0.58	+0.0
3,365,738	-		AO353_15220	0.58	+0.1
3,365,738	-		AO353_15220	0.58	-0.2
3,365,738	-		AO353_15220	0.58	+1.5
3,365,738	-		AO353_15220	0.58	-0.9
3,366,086	+				+0.1
3,366,086	+				+2.1
3,366,086	+				-0.7
3,366,087	-				-0.1
3,366,087	-				+1.4
3,366,087	-				-2.5
3,366,155	+				+1.8
3,366,155	+				-1.8
3,366,155	+				-1.2
3,366,155	+				+0.3
3,366,155	+				+2.1
3,366,155	+				-0.6
3,366,155	+				-0.5
3,366,156	-				+2.1
3,366,156	-				+0.7
3,366,156	-				-1.9
3,366,156	-				+1.1
3,366,156	-				-1.8
3,366,156	-				-0.1
3,366,156	-				+1.6
3,366,156	-				-0.3
3,366,156	-				-0.5
3,366,156	-				-0.0
3,366,156	-				+0.5
3,366,156	-				+0.2
3,366,156	-				+0.8
3,366,156	-				+0.5
3,366,156	-				+1.5
3,366,156	-				-0.9
3,366,164	+				+1.5
3,366,165	-				-0.5
3,366,170	+				+0.1
3,366,170	+				+0.1
3,366,170	+				+0.1
3,366,170	+				-1.1
3,366,170	+				-1.5
3,366,171	-				+1.1
3,366,171	-				+1.8
3,366,171	-				-0.2
3,366,172	+				-0.2
3,366,172	+				-0.5
3,366,207	+				+1.1
3,366,208	-				+0.1
3,366,253	+				-1.2
3,366,253	+				+0.8
3,366,253	+				+0.6
3,366,253	+				-0.7
3,366,253	+				-0.2
3,366,253	+				-0.5
3,366,254	-				-0.2
3,366,254	-				-0.9
3,366,254	-				+1.7
3,366,254	-				+0.3
3,366,254	-				+0.6
3,366,254	-				+0.1
3,366,352	+				+0.4
3,366,352	+				-1.7
3,366,352	+				-0.5
3,366,353	-				+0.7
3,366,353	-				+0.6
3,366,413	+				-1.3
3,366,414	-		AO353_15225	0.10	-0.1
3,366,414	-		AO353_15225	0.10	-0.9
3,366,481	-		AO353_15225	0.16	-1.1
3,366,507	+		AO353_15225	0.18	-0.3
3,366,508	-		AO353_15225	0.18	+0.3
3,366,591	+		AO353_15225	0.26	-1.5
3,366,591	+		AO353_15225	0.26	+1.0
3,366,591	+		AO353_15225	0.26	+0.1
3,366,591	+		AO353_15225	0.26	+0.1
3,366,591	+		AO353_15225	0.26	+0.1
3,366,591	+		AO353_15225	0.26	+0.5
3,366,591	+		AO353_15225	0.26	+2.1
3,366,591	+		AO353_15225	0.26	-0.7
3,366,592	-		AO353_15225	0.26	+1.3
3,366,592	-		AO353_15225	0.26	+0.1
3,366,592	-		AO353_15225	0.26	+1.1
3,366,604	-		AO353_15225	0.27	-2.2
3,366,604	-		AO353_15225	0.27	-1.6
3,366,630	+		AO353_15225	0.29	+0.0
3,366,630	+		AO353_15225	0.29	-0.5
3,366,630	+		AO353_15225	0.29	-2.2
3,366,630	+		AO353_15225	0.29	-0.2
3,366,630	+		AO353_15225	0.29	-1.1
3,366,631	-		AO353_15225	0.29	-1.2
3,366,631	-		AO353_15225	0.29	+0.4
3,366,631	-		AO353_15225	0.29	+0.2
3,366,662	+		AO353_15225	0.32	+0.2
3,366,663	-		AO353_15225	0.32	-2.1
3,366,744	+		AO353_15225	0.39	-0.7
3,366,744	+		AO353_15225	0.39	+1.1
3,366,744	+		AO353_15225	0.39	+0.9
3,366,744	+		AO353_15225	0.39	-0.7
3,366,744	+		AO353_15225	0.39	-0.5
3,366,745	-		AO353_15225	0.39	+1.1
3,367,002	+		AO353_15225	0.62	-0.2
3,367,003	-		AO353_15225	0.62	+0.1
3,367,003	-		AO353_15225	0.62	+0.5
3,367,092	+		AO353_15225	0.70	-0.6
3,367,093	-		AO353_15225	0.70	+0.1
3,367,093	-		AO353_15225	0.70	-0.5
3,367,264	-		AO353_15225	0.85	+0.3
3,367,264	-		AO353_15225	0.85	+1.1
3,367,264	-		AO353_15225	0.85	+0.4
3,367,264	-		AO353_15225	0.85	+0.7
3,367,386	+				-0.1
3,367,387	-				-0.0
3,367,435	-				+0.3
3,367,539	-				+2.3
3,367,600	+				-0.0
3,367,600	+				-1.8
3,367,784	+		AO353_15230	0.24	+1.4
3,367,784	+		AO353_15230	0.24	+0.0
3,367,784	+		AO353_15230	0.24	+1.3
3,367,802	+		AO353_15230	0.25	+0.3
3,367,803	-		AO353_15230	0.26	-1.0
3,367,844	+		AO353_15230	0.29	-0.5
3,367,844	+		AO353_15230	0.29	+0.2
3,367,845	-		AO353_15230	0.30	+1.7
3,367,845	-		AO353_15230	0.30	+1.1
3,367,845	-		AO353_15230	0.30	-0.5
3,367,845	-		AO353_15230	0.30	-0.8
3,367,845	-		AO353_15230	0.30	-1.9
3,367,845	-		AO353_15230	0.30	+0.9
3,367,880	+		AO353_15230	0.33	-0.3
3,367,955	+		AO353_15230	0.40	-1.3
3,367,955	+		AO353_15230	0.40	-0.3
3,367,955	+		AO353_15230	0.40	+0.5
3,367,955	+		AO353_15230	0.40	-1.0
3,367,955	+		AO353_15230	0.40	+0.1
3,367,955	+		AO353_15230	0.40	+0.4
3,367,956	-		AO353_15230	0.40	+0.4
3,367,956	-		AO353_15230	0.40	-1.5
3,367,956	-		AO353_15230	0.40	+1.1
3,367,956	-		AO353_15230	0.40	-0.9
3,367,956	-		AO353_15230	0.40	-2.5
3,367,956	-		AO353_15230	0.40	-0.5
3,367,956	-		AO353_15230	0.40	-0.9
3,368,141	+		AO353_15230	0.58	-0.5
3,368,142	-		AO353_15230	0.58	+0.1
3,368,192	+		AO353_15230	0.63	+1.1
3,368,193	-		AO353_15230	0.63	-2.2
3,368,193	-		AO353_15230	0.63	-0.3
3,368,193	-		AO353_15230	0.63	-0.5
3,368,204	+		AO353_15230	0.64	+0.6
3,368,204	+		AO353_15230	0.64	+0.2
3,368,204	+		AO353_15230	0.64	+1.5
3,368,204	+		AO353_15230	0.64	-2.3
3,368,204	+		AO353_15230	0.64	-0.2
3,368,204	+		AO353_15230	0.64	-0.8
3,368,205	-		AO353_15230	0.64	+1.1
3,368,205	-		AO353_15230	0.64	-0.9
3,368,205	-		AO353_15230	0.64	-2.7
3,368,205	-		AO353_15230	0.64	+1.4
3,368,205	-		AO353_15230	0.64	+0.6
3,368,205	-		AO353_15230	0.64	+0.0
3,368,288	+		AO353_15230	0.72	-1.2
3,368,288	+		AO353_15230	0.72	+1.1
3,368,288	+		AO353_15230	0.72	-2.1
3,368,288	+		AO353_15230	0.72	+1.1
3,368,289	-		AO353_15230	0.72	-0.5
3,368,289	-		AO353_15230	0.72	-1.2
3,368,289	-		AO353_15230	0.72	+1.6
3,368,289	-		AO353_15230	0.72	+1.1
3,368,289	-		AO353_15230	0.72	+0.4
3,368,289	-		AO353_15230	0.72	-0.4
3,368,289	-		AO353_15230	0.72	+0.2
3,368,363	+		AO353_15230	0.79	+2.3
3,368,363	+		AO353_15230	0.79	+0.7
3,368,363	+		AO353_15230	0.79	-0.5
3,368,363	+		AO353_15230	0.79	+0.1
3,368,363	+		AO353_15230	0.79	+0.1
3,368,363	+		AO353_15230	0.79	-0.9
3,368,364	-		AO353_15230	0.79	+0.3
3,368,364	-		AO353_15230	0.79	+1.7
3,368,375	+		AO353_15230	0.80	-1.2
3,368,375	+		AO353_15230	0.80	-0.1
3,368,375	+		AO353_15230	0.80	-0.5
3,368,376	-		AO353_15230	0.81	-0.2
3,368,376	-		AO353_15230	0.81	-0.7
3,368,376	-		AO353_15230	0.81	+0.5
3,368,376	-		AO353_15230	0.81	-0.1
3,368,376	-		AO353_15230	0.81	+0.2
3,368,393	+		AO353_15230	0.82	-1.8
3,368,393	+		AO353_15230	0.82	+0.8
3,368,393	+		AO353_15230	0.82	+1.3
3,368,394	-		AO353_15230	0.82	-1.1
3,368,420	+		AO353_15230	0.85	+1.8
3,368,420	+		AO353_15230	0.85	+1.1
3,368,420	+		AO353_15230	0.85	-0.4
3,368,420	+		AO353_15230	0.85	+0.3
3,368,421	-		AO353_15230	0.85	+0.1
3,368,421	-		AO353_15230	0.85	-1.2
3,368,421	-		AO353_15230	0.85	+0.4
3,368,421	-		AO353_15230	0.85	-0.5