Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11465

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
2,533,144	+				-0.6
2,533,206	-				-2.2
2,533,206	-				-0.1
2,533,286	+		AO353_11460	0.11	-1.2
2,533,286	+		AO353_11460	0.11	-1.1
2,533,286	+		AO353_11460	0.11	+0.5
2,533,286	+		AO353_11460	0.11	+2.4
2,533,286	+		AO353_11460	0.11	+1.2
2,533,286	+		AO353_11460	0.11	-1.0
2,533,287	-		AO353_11460	0.11	+0.3
2,533,287	-		AO353_11460	0.11	+0.8
2,533,287	-		AO353_11460	0.11	+0.5
2,533,287	-		AO353_11460	0.11	+0.1
2,533,301	+		AO353_11460	0.13	-1.8
2,533,301	+		AO353_11460	0.13	+0.9
2,533,329	+		AO353_11460	0.16	+0.1
2,533,329	+		AO353_11460	0.16	+0.4
2,533,330	-		AO353_11460	0.16	-1.0
2,533,343	+		AO353_11460	0.17	-0.6
2,533,344	-		AO353_11460	0.18	+1.4
2,533,344	-		AO353_11460	0.18	+1.7
2,533,381	+		AO353_11460	0.22	+0.3
2,533,381	+		AO353_11460	0.22	-0.7
2,533,381	+		AO353_11460	0.22	+0.6
2,533,381	+		AO353_11460	0.22	+0.7
2,533,381	+		AO353_11460	0.22	+1.4
2,533,381	+		AO353_11460	0.22	+0.2
2,533,382	-		AO353_11460	0.22	-1.0
2,533,382	-		AO353_11460	0.22	-0.8
2,533,382	-		AO353_11460	0.22	-1.1
2,533,382	-		AO353_11460	0.22	-0.5
2,533,397	+		AO353_11460	0.24	+0.0
2,533,397	+		AO353_11460	0.24	-1.0
2,533,397	+		AO353_11460	0.24	+0.8
2,533,397	+		AO353_11460	0.24	+0.8
2,533,397	+		AO353_11460	0.24	-0.3
2,533,397	+		AO353_11460	0.24	-1.6
2,533,397	+		AO353_11460	0.24	+0.1
2,533,398	-		AO353_11460	0.24	-0.1
2,533,398	-		AO353_11460	0.24	+1.0
2,533,398	-		AO353_11460	0.24	+1.0
2,533,398	-		AO353_11460	0.24	-1.4
2,533,398	-		AO353_11460	0.24	+0.1
2,533,398	-		AO353_11460	0.24	-0.2
2,533,398	-		AO353_11460	0.24	+0.6
2,533,398	-		AO353_11460	0.24	+0.5
2,533,398	-		AO353_11460	0.24	-1.2
2,533,409	+		AO353_11460	0.25	-1.3
2,533,409	+		AO353_11460	0.25	-1.6
2,533,409	+		AO353_11460	0.25	+0.9
2,533,409	+		AO353_11460	0.25	-0.2
2,533,409	+		AO353_11460	0.25	-0.1
2,533,409	+		AO353_11460	0.25	+0.6
2,533,409	+		AO353_11460	0.25	+1.7
2,533,410	-		AO353_11460	0.25	+0.8
2,533,410	-		AO353_11460	0.25	-1.3
2,533,410	-		AO353_11460	0.25	+1.2
2,533,410	-		AO353_11460	0.25	-0.6
2,533,410	-		AO353_11460	0.25	-1.9
2,533,410	-		AO353_11460	0.25	+0.6
2,533,410	-		AO353_11460	0.25	-0.8
2,533,410	-		AO353_11460	0.25	-0.1
2,533,410	-		AO353_11460	0.25	-0.5
2,533,410	-		AO353_11460	0.25	-0.6
2,533,497	-		AO353_11460	0.35	-0.5
2,533,627	-		AO353_11460	0.51	-0.4
2,533,643	+		AO353_11460	0.52	+0.0
2,533,644	-		AO353_11460	0.53	-2.1
2,533,644	-		AO353_11460	0.53	+1.0
2,533,644	-		AO353_11460	0.53	+1.6
2,533,814	+		AO353_11460	0.72	-0.3
2,533,815	-		AO353_11460	0.72	-1.2
2,533,815	-		AO353_11460	0.72	+1.0
2,533,815	-		AO353_11460	0.72	+0.4
2,533,815	-		AO353_11460	0.72	-0.0
2,533,858	+		AO353_11460	0.78	+1.2
2,533,922	+		AO353_11460	0.85	+0.4
2,533,922	+		AO353_11460	0.85	+1.4
2,533,922	+		AO353_11460	0.85	+1.1
2,533,922	+		AO353_11460	0.85	+0.4
2,533,922	+		AO353_11460	0.85	-1.6
2,533,922	+		AO353_11460	0.85	+0.7
2,533,922	+		AO353_11460	0.85	-1.2
2,533,923	-		AO353_11460	0.85	+0.8
2,533,923	-		AO353_11460	0.85	+1.1
2,533,923	-		AO353_11460	0.85	-0.4
2,533,923	-		AO353_11460	0.85	-0.5
2,533,925	+		AO353_11460	0.85	-0.2
2,533,925	+		AO353_11460	0.85	-1.0
2,533,925	+		AO353_11460	0.85	+1.4
2,533,925	+		AO353_11460	0.85	+1.0
2,533,925	+		AO353_11460	0.85	-0.5
2,533,925	+		AO353_11460	0.85	-1.5
2,533,925	+		AO353_11460	0.85	-1.2
2,533,925	+		AO353_11460	0.85	-1.0
2,533,926	-		AO353_11460	0.85	+0.4
2,533,926	-		AO353_11460	0.85	+0.5
2,533,926	-		AO353_11460	0.85	+1.0
2,533,926	-		AO353_11460	0.85	+0.0
2,533,926	-		AO353_11460	0.85	+0.1
2,533,926	-		AO353_11460	0.85	+0.5
2,533,926	-		AO353_11460	0.85	-0.2
2,533,926	-		AO353_11460	0.85	-2.1
2,533,926	-		AO353_11460	0.85	-0.6
2,533,926	-		AO353_11460	0.85	-0.2
2,533,926	-		AO353_11460	0.85	+0.5
2,533,927	+		AO353_11460	0.86	-0.3
2,533,927	+		AO353_11460	0.86	+0.0
2,533,927	+		AO353_11460	0.86	+1.0
2,533,927	+		AO353_11460	0.86	+0.3
2,533,927	+		AO353_11460	0.86	-1.3
2,533,927	+		AO353_11460	0.86	-1.2
2,533,927	+		AO353_11460	0.86	-0.2
2,533,927	+		AO353_11460	0.86	-1.6
2,533,928	-		AO353_11460	0.86	-0.4
2,533,928	-		AO353_11460	0.86	+0.8
2,533,928	-		AO353_11460	0.86	+2.4
2,533,928	-		AO353_11460	0.86	-0.2
2,533,928	-		AO353_11460	0.86	-0.8
2,533,928	-		AO353_11460	0.86	-0.5
2,533,928	-		AO353_11460	0.86	+0.4
2,533,928	-		AO353_11460	0.86	+1.6
2,533,928	-		AO353_11460	0.86	+0.7
2,533,928	-		AO353_11460	0.86	+1.2
2,533,928	-		AO353_11460	0.86	+3.4
2,533,944	+		AO353_11460	0.88	-0.1
2,533,944	+		AO353_11460	0.88	+2.0
2,533,945	-		AO353_11460	0.88	-0.5
2,533,945	-		AO353_11460	0.88	-0.4
2,533,945	-		AO353_11460	0.88	-1.5
2,533,945	-		AO353_11460	0.88	-0.2
2,534,018	+				+1.4
2,534,019	-				+0.4
2,534,054	+				+1.4
2,534,054	+				-2.0
2,534,054	+				-2.2
2,534,055	-				-1.1
2,534,061	+				-1.1
2,534,061	+				+1.4
2,534,107	+				-0.4
2,534,119	-				-0.2
2,534,119	-				+0.2
2,534,130	+				+0.0
2,534,130	+				-1.2
2,534,130	+				-1.1
2,534,130	+				+0.8
2,534,130	+				-0.9
2,534,131	-				+1.4
2,534,131	-				-1.4
2,534,131	-				-1.2
2,534,131	-				-1.1
2,534,193	+				+0.8
2,534,193	+				+0.0
2,534,193	+				-2.6
2,534,193	+				-0.6
2,534,193	+				+0.3
2,534,193	+				+0.4
2,534,193	+				-0.8
2,534,193	+				+1.0
2,534,193	+				+0.4
2,534,193	+				+0.8
2,534,193	+				+1.4
2,534,193	+				+1.0
2,534,193	+				-0.9
2,534,193	+				+2.4
2,534,193	+				+1.3
2,534,193	+				+0.6
2,534,194	-				-2.0
2,534,194	-				-1.2
2,534,194	-				+0.2
2,534,194	-				+0.6
2,534,194	-				+0.7
2,534,194	-				-1.6
2,534,225	+				+1.4
2,534,225	+				-0.8
2,534,225	+				-0.6
2,534,225	+				-1.0
2,534,276	+				-0.3
2,534,277	-				-1.0
2,534,277	-				+0.1
2,534,318	+				+1.4
2,534,318	+				+0.6
2,534,318	+				-0.8
2,534,318	+				-1.5
2,534,319	-				+0.8
2,534,349	+				+0.0
2,534,349	+				-0.2
2,534,349	+				-0.5
2,534,349	+				-0.7
2,534,349	+				-0.1
2,534,349	+				-0.4
2,534,349	+				-0.3
2,534,349	+				-0.7
2,534,349	+				-1.2
2,534,349	+				+1.4
2,534,349	+				-1.6
2,534,349	+				-1.6
2,534,350	-				+0.4
2,534,350	-				-1.8
2,534,350	-				+0.5
2,534,350	-				+0.0
2,534,350	-				-0.4
2,534,350	-				-0.8
2,534,350	-				+1.6
2,534,350	-				-0.7
2,534,350	-				+2.4
2,534,350	-				+0.1
2,534,350	-				+0.4
2,534,350	-				-0.6
2,534,350	-				-0.2
2,534,352	+				+2.6
2,534,352	+				+1.0
2,534,352	+				-0.9
2,534,352	+				+1.0
2,534,352	+				-1.2
2,534,352	+				-0.0
2,534,352	+				+0.5
2,534,352	+				+0.1
2,534,352	+				-1.6
2,534,352	+				-1.4
2,534,352	+				-0.2
2,534,352	+				-2.2
2,534,352	+				-0.5
2,534,352	+				+1.2
2,534,353	-				-0.4
2,534,353	-				-0.1
2,534,353	-				+1.0
2,534,353	-				-0.6
2,534,353	-				-0.1
2,534,353	-				+0.5
2,534,353	-				+1.0
2,534,353	-				-0.2
2,534,353	-				+0.4
2,534,353	-				+0.0
2,534,353	-				+1.4
2,534,353	-				-2.0
2,534,353	-				+0.4
2,534,353	-				+1.4
2,534,353	-				-1.2
2,534,365	+				+0.5
2,534,366	-				+2.4
2,534,542	+		AO353_11465	0.14	-1.4
2,534,543	-		AO353_11465	0.14	-1.3
2,534,543	-		AO353_11465	0.14	+0.6
2,534,543	-		AO353_11465	0.14	+0.6
2,534,738	+		AO353_11465	0.21	+0.6
2,534,738	+		AO353_11465	0.21	-0.4
2,534,739	-		AO353_11465	0.21	-0.5
2,534,824	-		AO353_11465	0.24	-2.0
2,534,824	-		AO353_11465	0.24	+0.0
2,534,826	+		AO353_11465	0.24	-0.2
2,534,826	+		AO353_11465	0.24	+0.4
2,534,827	-		AO353_11465	0.24	-0.5
2,534,827	-		AO353_11465	0.24	+0.6
2,534,827	-		AO353_11465	0.24	+1.4
2,534,827	-		AO353_11465	0.24	-0.6
2,534,827	-		AO353_11465	0.24	+1.9
2,534,827	-		AO353_11465	0.24	-1.0
2,534,827	-		AO353_11465	0.24	+0.0
2,534,915	-		AO353_11465	0.27	-2.0
2,535,038	+		AO353_11465	0.31	-1.6
2,535,038	+		AO353_11465	0.31	-0.8
2,535,038	+		AO353_11465	0.31	-0.1
2,535,038	+		AO353_11465	0.31	-1.6
2,535,038	+		AO353_11465	0.31	-1.0
2,535,038	+		AO353_11465	0.31	+0.2
2,535,039	-		AO353_11465	0.31	-1.2
2,535,039	-		AO353_11465	0.31	+1.5
2,535,102	+		AO353_11465	0.33	-1.2
2,535,102	+		AO353_11465	0.33	-2.5
2,535,102	+		AO353_11465	0.33	+0.5
2,535,102	+		AO353_11465	0.33	-0.8
2,535,102	+		AO353_11465	0.33	-2.7
2,535,102	+		AO353_11465	0.33	-0.6
2,535,102	+		AO353_11465	0.33	+1.4
2,535,102	+		AO353_11465	0.33	-0.6
2,535,102	+		AO353_11465	0.33	-1.0
2,535,103	-		AO353_11465	0.33	+1.3
2,535,103	-		AO353_11465	0.33	-0.5
2,535,103	-		AO353_11465	0.33	-1.6
2,535,103	-		AO353_11465	0.33	-0.6
2,535,103	-		AO353_11465	0.33	-1.8
2,535,103	-		AO353_11465	0.33	+0.8
2,535,103	-		AO353_11465	0.33	+1.1
2,535,103	-		AO353_11465	0.33	-1.0
2,535,103	-		AO353_11465	0.33	-0.6
2,535,103	-		AO353_11465	0.33	+0.4
2,535,240	+		AO353_11465	0.38	-0.2
2,535,240	+		AO353_11465	0.38	-0.5
2,535,294	+		AO353_11465	0.40	+0.5
2,535,294	+		AO353_11465	0.40	-1.2
2,535,294	+		AO353_11465	0.40	-0.8
2,535,468	+		AO353_11465	0.46	+1.4
2,535,468	+		AO353_11465	0.46	-1.8
2,535,468	+		AO353_11465	0.46	+0.2
2,535,468	+		AO353_11465	0.46	-0.1
2,535,468	+		AO353_11465	0.46	+1.0
2,535,468	+		AO353_11465	0.46	-1.4
2,535,468	+		AO353_11465	0.46	+1.4
2,535,468	+		AO353_11465	0.46	-2.2
2,535,468	+		AO353_11465	0.46	-0.8
2,535,469	-		AO353_11465	0.46	-0.4
2,535,469	-		AO353_11465	0.46	-0.2
2,535,469	-		AO353_11465	0.46	-1.8
2,535,469	-		AO353_11465	0.46	-2.0
2,535,469	-		AO353_11465	0.46	-1.6
2,535,469	-		AO353_11465	0.46	-1.0
2,535,469	-		AO353_11465	0.46	+0.1
2,535,469	-		AO353_11465	0.46	+0.3
2,535,469	-		AO353_11465	0.46	-1.6
2,535,469	-		AO353_11465	0.46	-0.1
2,535,469	-		AO353_11465	0.46	+0.9
2,535,469	-		AO353_11465	0.46	+3.9
2,535,469	-		AO353_11465	0.46	-1.8
2,535,469	-		AO353_11465	0.46	+0.0
2,535,469	-		AO353_11465	0.46	+0.9
2,535,588	+		AO353_11465	0.50	+1.2
2,535,588	+		AO353_11465	0.50	+1.3
2,535,589	-		AO353_11465	0.50	+0.4
2,535,589	-		AO353_11465	0.50	+1.4
2,535,766	+		AO353_11465	0.56	-1.4
2,535,766	+		AO353_11465	0.56	+0.4
2,535,766	+		AO353_11465	0.56	+0.7
2,535,766	+		AO353_11465	0.56	+0.8
2,535,766	+		AO353_11465	0.56	+0.4
2,535,766	+		AO353_11465	0.56	+1.0
2,535,766	+		AO353_11465	0.56	+0.1
2,535,766	+		AO353_11465	0.56	+1.4
2,535,766	+		AO353_11465	0.56	+0.8
2,535,766	+		AO353_11465	0.56	-0.6
2,535,766	+		AO353_11465	0.56	-0.4
2,535,766	+		AO353_11465	0.56	-1.4
2,535,766	+		AO353_11465	0.56	+0.4
2,535,767	-		AO353_11465	0.56	+0.4
2,535,767	-		AO353_11465	0.56	+0.3
2,535,767	-		AO353_11465	0.56	+1.5
2,535,767	-		AO353_11465	0.56	-0.8
2,535,767	-		AO353_11465	0.56	-1.7
2,535,815	+		AO353_11465	0.58	-0.1
2,535,815	+		AO353_11465	0.58	-1.0
2,535,816	-		AO353_11465	0.58	-0.2
2,535,816	-		AO353_11465	0.58	-0.8
2,535,816	-		AO353_11465	0.58	-0.8
2,535,816	-		AO353_11465	0.58	-2.1
2,535,816	-		AO353_11465	0.58	-1.5
2,535,816	-		AO353_11465	0.58	-0.7
2,535,847	-		AO353_11465	0.59	-0.6
2,535,934	+		AO353_11465	0.62	+1.4
2,535,934	+		AO353_11465	0.62	-0.6
2,535,934	+		AO353_11465	0.62	+0.1
2,535,934	+		AO353_11465	0.62	+0.4
2,535,934	+		AO353_11465	0.62	+0.7
2,535,934	+		AO353_11465	0.62	+0.4
2,535,934	+		AO353_11465	0.62	-1.0
2,535,935	-		AO353_11465	0.62	-0.1
2,535,935	-		AO353_11465	0.62	+0.6
2,536,030	+		AO353_11465	0.66	+0.9
2,536,030	+		AO353_11465	0.66	+1.6
2,536,030	+		AO353_11465	0.66	-0.2
2,536,031	-		AO353_11465	0.66	+0.3
2,536,031	-		AO353_11465	0.66	+0.7
2,536,308	+		AO353_11465	0.75	-2.2
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