Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11195

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
2,465,762	+		AO353_11190	0.57	-1.8
2,465,763	-		AO353_11190	0.57	-0.7
2,465,810	+		AO353_11190	0.59	+2.0
2,465,810	+		AO353_11190	0.59	+2.4
2,465,810	+		AO353_11190	0.59	+0.1
2,465,810	+		AO353_11190	0.59	-2.4
2,465,810	+		AO353_11190	0.59	-1.2
2,465,810	+		AO353_11190	0.59	-2.0
2,465,810	+		AO353_11190	0.59	-0.6
2,465,810	+		AO353_11190	0.59	-2.0
2,465,810	+		AO353_11190	0.59	-1.5
2,465,810	+		AO353_11190	0.59	-0.1
2,465,810	+		AO353_11190	0.59	-1.8
2,465,810	+		AO353_11190	0.59	-1.5
2,465,811	-		AO353_11190	0.59	-1.3
2,465,811	-		AO353_11190	0.59	-0.9
2,465,811	-		AO353_11190	0.59	-0.4
2,465,811	-		AO353_11190	0.59	-2.6
2,465,811	-		AO353_11190	0.59	+0.0
2,465,811	-		AO353_11190	0.59	+0.1
2,465,811	-		AO353_11190	0.59	-1.0
2,465,811	-		AO353_11190	0.59	-1.4
2,466,006	-		AO353_11190	0.68	-0.4
2,466,131	+		AO353_11190	0.74	-1.2
2,466,131	+		AO353_11190	0.74	-1.9
2,466,215	+		AO353_11190	0.78	+0.4
2,466,216	-		AO353_11190	0.78	-0.1
2,466,216	-		AO353_11190	0.78	+0.2
2,466,219	+		AO353_11190	0.78	-0.1
2,466,219	+		AO353_11190	0.78	-1.0
2,466,219	+		AO353_11190	0.78	-3.3
2,466,220	-		AO353_11190	0.78	-0.2
2,466,220	-		AO353_11190	0.78	-1.8
2,466,220	-		AO353_11190	0.78	-0.0
2,466,220	-		AO353_11190	0.78	-0.8
2,466,220	-		AO353_11190	0.78	-1.4
2,466,220	-		AO353_11190	0.78	-2.3
2,466,220	-		AO353_11190	0.78	-2.2
2,466,220	-		AO353_11190	0.78	+0.2
2,466,247	+		AO353_11190	0.80	-1.2
2,466,281	+		AO353_11190	0.81	+0.1
2,466,282	-		AO353_11190	0.81	+0.1
2,466,282	-		AO353_11190	0.81	-1.9
2,466,487	+				-1.0
2,466,531	+				-1.0
2,466,531	+				-1.3
2,466,531	+				-1.4
2,466,531	+				-1.9
2,466,531	+				-1.3
2,466,531	+				+0.2
2,466,532	-				-0.6
2,466,532	-				-0.9
2,466,532	-				-0.5
2,466,618	+				-1.9
2,466,618	+				-0.2
2,466,618	+				+0.2
2,466,618	+				+0.4
2,466,618	+				-2.4
2,466,618	+				-1.1
2,466,619	-				-0.8
2,466,619	-				+0.8
2,466,683	+				-1.2
2,466,683	+				-0.6
2,466,683	+				-1.1
2,466,683	+				-1.6
2,466,683	+				-2.2
2,466,683	+				-1.3
2,466,683	+				-2.7
2,466,684	-				-1.5
2,466,684	-				-0.2
2,466,684	-				-2.4
2,466,684	-				-1.5
2,466,684	-				-0.7
2,466,684	-				+0.0
2,466,684	-				-1.1
2,466,684	-				-0.7
2,466,684	-				-2.8
2,466,684	-				+0.8
2,466,684	-				+1.0
2,466,684	-				-1.6
2,466,684	-				-0.9
2,466,684	-				-1.1
2,466,684	-				+0.7
2,466,684	-				-1.2
2,466,684	-				-1.8
2,466,684	-				-0.2
2,466,714	+				-1.0
2,467,022	+		AO353_11195	0.25	-0.8
2,467,022	+		AO353_11195	0.25	-0.1
2,467,023	-		AO353_11195	0.25	-1.6
2,467,023	-		AO353_11195	0.25	-1.6
2,467,023	-		AO353_11195	0.25	+0.4
2,467,075	+		AO353_11195	0.29	+0.0
2,467,075	+		AO353_11195	0.29	-1.0
2,467,075	+		AO353_11195	0.29	+0.5
2,467,076	-		AO353_11195	0.29	+0.4
2,467,076	-		AO353_11195	0.29	-1.6
2,467,173	+		AO353_11195	0.36	-1.6
2,467,173	+		AO353_11195	0.36	-1.1
2,467,173	+		AO353_11195	0.36	-1.0
2,467,173	+		AO353_11195	0.36	-1.6
2,467,173	+		AO353_11195	0.36	+1.4
2,467,173	+		AO353_11195	0.36	+0.2
2,467,174	-		AO353_11195	0.36	-0.6
2,467,174	-		AO353_11195	0.36	+1.4
2,467,174	-		AO353_11195	0.36	-1.4
2,467,174	-		AO353_11195	0.36	-2.0
2,467,174	-		AO353_11195	0.36	-1.3
2,467,174	-		AO353_11195	0.36	-0.5
2,467,228	+		AO353_11195	0.40	-1.9
2,467,228	+		AO353_11195	0.40	-0.9
2,467,229	-		AO353_11195	0.40	-0.4
2,467,229	-		AO353_11195	0.40	-0.6
2,467,229	-		AO353_11195	0.40	+1.4
2,467,229	-		AO353_11195	0.40	+0.4
2,467,229	-		AO353_11195	0.40	-1.4
2,467,229	-		AO353_11195	0.40	+2.4
2,467,278	+		AO353_11195	0.44	-2.3
2,467,412	+		AO353_11195	0.54	-0.2
2,467,779	+		AO353_11195	0.81	-0.4
2,467,779	+		AO353_11195	0.81	-0.4
2,467,779	+		AO353_11195	0.81	-0.6
2,467,779	+		AO353_11195	0.81	-0.2
2,467,779	+		AO353_11195	0.81	-0.1
2,467,779	+		AO353_11195	0.81	-1.2
2,467,779	+		AO353_11195	0.81	-0.8
2,467,780	-		AO353_11195	0.81	-0.2
2,467,780	-		AO353_11195	0.81	+0.4
2,467,780	-		AO353_11195	0.81	-1.0
2,467,780	-		AO353_11195	0.81	+0.6
2,467,785	+		AO353_11195	0.81	-0.4
2,467,785	+		AO353_11195	0.81	-0.6
2,467,785	+		AO353_11195	0.81	+0.7
2,467,785	+		AO353_11195	0.81	-1.3
2,467,785	+		AO353_11195	0.81	-2.3
2,467,785	+		AO353_11195	0.81	+0.3
2,467,785	+		AO353_11195	0.81	-0.3
2,467,785	+		AO353_11195	0.81	-1.2
2,467,785	+		AO353_11195	0.81	+0.6
2,467,785	+		AO353_11195	0.81	-0.6
2,467,786	-		AO353_11195	0.81	+0.0
2,467,786	-		AO353_11195	0.81	-1.3
2,467,786	-		AO353_11195	0.81	-0.5
2,467,786	-		AO353_11195	0.81	-0.2
2,467,786	-		AO353_11195	0.81	+0.4
2,467,786	-		AO353_11195	0.81	+0.4
2,467,786	-		AO353_11195	0.81	-1.1
2,467,786	-		AO353_11195	0.81	-1.2
2,467,786	-		AO353_11195	0.81	-1.2
2,467,786	-		AO353_11195	0.81	-0.7
2,467,786	-		AO353_11195	0.81	+0.5
2,467,786	-		AO353_11195	0.81	-2.4
2,467,786	-		AO353_11195	0.81	-2.0
2,467,786	-		AO353_11195	0.81	-0.0
2,467,786	-		AO353_11195	0.81	-0.2
2,467,786	-		AO353_11195	0.81	-2.5
2,467,786	-		AO353_11195	0.81	-1.0
2,467,786	-		AO353_11195	0.81	-1.2
2,467,786	-		AO353_11195	0.81	-0.8
2,467,795	-		AO353_11195	0.82	-0.0
2,467,795	-		AO353_11195	0.82	-0.4
2,467,795	-		AO353_11195	0.82	-1.4
2,467,795	-		AO353_11195	0.82	-0.6
2,467,795	-		AO353_11195	0.82	+0.4
2,467,795	-		AO353_11195	0.82	-1.6
2,467,795	-		AO353_11195	0.82	+0.6
2,467,795	-		AO353_11195	0.82	-1.4
2,467,795	-		AO353_11195	0.82	+0.4
2,467,795	-		AO353_11195	0.82	-2.0
2,467,795	-		AO353_11195	0.82	+0.0
2,467,795	-		AO353_11195	0.82	-1.2
2,467,795	-		AO353_11195	0.82	-0.4
2,467,866	+		AO353_11195	0.87	-1.1
2,467,866	+		AO353_11195	0.87	+0.3
2,467,866	+		AO353_11195	0.87	-0.9
2,467,866	+		AO353_11195	0.87	-2.5
2,467,866	+		AO353_11195	0.87	+0.8
2,467,866	+		AO353_11195	0.87	+0.4
2,467,866	+		AO353_11195	0.87	-0.2
2,467,866	+		AO353_11195	0.87	+0.0
2,467,866	+		AO353_11195	0.87	-1.4
2,467,866	+		AO353_11195	0.87	-0.2
2,467,867	-		AO353_11195	0.87	-1.0
2,467,867	-		AO353_11195	0.87	-1.4
2,467,867	-		AO353_11195	0.87	-0.6
2,467,867	-		AO353_11195	0.87	-0.0
2,467,867	-		AO353_11195	0.87	-1.4
2,467,867	-		AO353_11195	0.87	-1.7
2,467,867	-		AO353_11195	0.87	+0.5
2,467,867	-		AO353_11195	0.87	-1.0
2,467,867	-		AO353_11195	0.87	-1.1
2,467,867	-		AO353_11195	0.87	-1.7
2,467,867	-		AO353_11195	0.87	-0.8
2,467,867	-		AO353_11195	0.87	-1.2
2,467,869	+		AO353_11195	0.87	-0.4
2,467,869	+		AO353_11195	0.87	+0.6
2,467,869	+		AO353_11195	0.87	-1.2
2,467,869	+		AO353_11195	0.87	-2.1
2,467,869	+		AO353_11195	0.87	-2.0
2,467,869	+		AO353_11195	0.87	-0.1
2,467,869	+		AO353_11195	0.87	-0.8
2,467,869	+		AO353_11195	0.87	-1.4
2,467,869	+		AO353_11195	0.87	-1.1
2,467,869	+		AO353_11195	0.87	-1.5
2,467,869	+		AO353_11195	0.87	+0.3
2,467,869	+		AO353_11195	0.87	+0.9
2,467,869	+		AO353_11195	0.87	-0.6
2,467,869	+		AO353_11195	0.87	-0.0
2,467,869	+		AO353_11195	0.87	-1.3
2,467,869	+		AO353_11195	0.87	-0.6
2,467,869	+		AO353_11195	0.87	-1.2
2,467,869	+		AO353_11195	0.87	-0.2
2,467,869	+		AO353_11195	0.87	-2.8
2,467,869	+		AO353_11195	0.87	-1.0
2,467,870	-		AO353_11195	0.87	+0.6
2,467,870	-		AO353_11195	0.87	-1.6
2,467,870	-		AO353_11195	0.87	-0.7
2,467,870	-		AO353_11195	0.87	-1.4
2,467,870	-		AO353_11195	0.87	-0.5
2,467,870	-		AO353_11195	0.87	-1.2
2,467,870	-		AO353_11195	0.87	-2.5
2,467,870	-		AO353_11195	0.87	-1.8
2,467,870	-		AO353_11195	0.87	-3.2
2,467,870	-		AO353_11195	0.87	-1.1
2,467,870	-		AO353_11195	0.87	+0.4
2,467,870	-		AO353_11195	0.87	-1.2
2,467,870	-		AO353_11195	0.87	+0.8
2,467,870	-		AO353_11195	0.87	-1.2
2,467,877	+		AO353_11195	0.88	-1.0
2,467,877	+		AO353_11195	0.88	-0.2
2,467,877	+		AO353_11195	0.88	-1.0
2,467,877	+		AO353_11195	0.88	-1.2
2,467,877	+		AO353_11195	0.88	+1.4
2,467,877	+		AO353_11195	0.88	-0.4
2,467,878	-		AO353_11195	0.88	+0.0
2,467,878	-		AO353_11195	0.88	-1.1
2,467,878	-		AO353_11195	0.88	-1.1
2,467,878	-		AO353_11195	0.88	-1.0
2,467,989	+				-1.2
2,467,989	+				-2.1
2,467,989	+				-1.2
2,467,989	+				-1.3
2,467,990	-				-0.6
2,467,990	-				+0.0
2,467,990	-				-0.2
2,467,990	-				+0.6
2,467,990	-				-0.2
2,468,041	-				+0.2
2,468,041	-				+1.4
2,468,086	+				+0.5
2,468,086	+				+1.8
2,468,087	-				-0.2
2,468,113	+				+0.4
2,468,113	+				+0.4
2,468,113	+				-0.7
2,468,113	+				+0.8
2,468,113	+				-0.9
2,468,113	+				-0.4
2,468,113	+				-0.2
2,468,113	+				-0.2
2,468,113	+				+0.8
2,468,114	-				-1.0
2,468,114	-				-0.1
2,468,114	-				-1.3
2,468,114	-				+0.5
2,468,114	-				-1.0
2,468,114	-				+3.0
2,468,114	-				-1.3
2,468,114	-				-0.6
2,468,125	-				-1.2
2,468,131	+				-0.6
2,468,131	+				+2.4
2,468,131	+				+0.9
2,468,131	+				-1.8
2,468,131	+				+0.2
2,468,131	+				-0.6
2,468,131	+				+1.0
2,468,131	+				-0.4
2,468,131	+				+0.8
2,468,131	+				-0.6
2,468,131	+				-0.1
2,468,131	+				-1.4
2,468,131	+				+1.4
2,468,131	+				-0.2
2,468,131	+				+0.4
2,468,131	+				-1.6
2,468,132	-				-0.0
2,468,132	-				-0.2
2,468,132	-				+2.1
2,468,132	-				-1.6
2,468,132	-				+0.6
2,468,132	-				+1.2
2,468,132	-				-1.6
2,468,132	-				+0.1
2,468,132	-				+0.5
2,468,132	-				+0.4
2,468,132	-				+0.1
2,468,132	-				-0.4
2,468,132	-				-0.1
2,468,132	-				-0.2
2,468,137	+				-0.0
2,468,137	+				-2.1
2,468,137	+				+1.1
2,468,137	+				+0.0
2,468,138	-				+0.6
2,468,138	-				-0.2
2,468,138	-				+0.3
2,468,230	+				+0.2
2,468,230	+				+0.6
2,468,231	-				+0.1
2,468,232	+				+0.0
2,468,233	-				+0.1
2,468,236	+				-0.2
2,468,267	+				+0.5
2,468,362	+				-1.1
2,468,362	+				-1.1
2,468,362	+				-1.3
2,468,362	+				+1.4
2,468,362	+				-1.1
2,468,362	+				-1.0
2,468,362	+				+0.0
2,468,362	+				-0.4
2,468,362	+				+1.6
2,468,362	+				-1.3
2,468,362	+				-1.3
2,468,362	+				-1.0
2,468,362	+				-1.8
2,468,362	+				-0.0
2,468,362	+				-0.0
2,468,362	+				-0.2
2,468,362	+				-1.6
2,468,362	+				-0.1
2,468,362	+				-0.4
2,468,362	+				-1.0
2,468,362	+				+0.7
2,468,362	+				-1.4
2,468,362	+				+1.4
2,468,362	+				+0.8
2,468,362	+				+0.1
2,468,362	+				+0.2
2,468,362	+				+1.0
2,468,362	+				-0.4
2,468,362	+				-1.0
2,468,362	+				+0.5
2,468,362	+				+0.4
2,468,362	+				+2.1
2,468,362	+				-1.4
2,468,362	+				-1.4
2,468,362	+				-0.2
2,468,362	+				-0.7
2,468,362	+				+0.1
2,468,362	+				+0.5
2,468,362	+				+0.5
2,468,362	+				+1.4
2,468,362	+				-0.0
2,468,362	+				-0.2
2,468,362	+				+0.6
2,468,362	+				-1.0
2,468,362	+				+0.2
2,468,362	+				-2.7
2,468,362	+				+0.2
2,468,363	-				-0.1
2,468,363	-				-0.2
2,468,363	-				-1.7
2,468,363	-				-0.2
2,468,363	-				+0.5
2,468,363	-				-1.3
2,468,363	-				+1.0
2,468,363	-				+0.2
2,468,363	-				-0.7
2,468,363	-				+0.3
2,468,363	-				-0.6
2,468,363	-				+0.0
2,468,363	-				+1.0
2,468,363	-				-0.2
2,468,363	-				-1.1
2,468,363	-				+1.1
2,468,363	-				-0.4
2,468,363	-				-1.2
2,468,363	-				+1.9
2,468,363	-				+0.2
2,468,363	-				-1.3
2,468,363	-				+1.4
2,468,363	-				-2.1
2,468,363	-				+2.4
2,468,363	-				+0.5
2,468,363	-				-1.7
2,468,363	-				-0.9
2,468,363	-				+1.8
2,468,363	-				+0.1
2,468,363	-				+1.1
2,468,363	-				+0.4
2,468,363	-				-0.2
2,468,363	-				+1.0
2,468,363	-				+0.5
2,468,363	-				-2.1
2,468,363	-				-0.5
2,468,363	-				-0.5
2,468,363	-				-1.2
2,468,363	-				+1.2
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2,468,363	-				+3.4
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2,468,363	-				-2.0
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2,468,363	-				+3.0
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2,468,363	-				+1.3
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2,468,370	+				-0.4
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2,468,370	+				-1.6
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2,468,371	-				-1.2
2,468,732	+		AO353_11200	0.41	-0.9
2,468,732	+		AO353_11200	0.41	+0.1
2,468,732	+		AO353_11200	0.41	-1.0
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2,468,734	+		AO353_11200	0.41	-1.8
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2,468,885	+		AO353_11200	0.58	+0.0
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2,468,886	-		AO353_11200	0.58	-0.2
2,468,888	-		AO353_11200	0.59	-1.6