Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11190

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
2,463,562	+		AO353_11185	0.31	-0.1
2,463,562	+		AO353_11185	0.31	-2.5
2,463,562	+		AO353_11185	0.31	-1.1
2,463,562	+		AO353_11185	0.31	-0.4
2,463,562	+		AO353_11185	0.31	-1.4
2,463,706	-		AO353_11185	0.42	-1.4
2,463,928	+		AO353_11185	0.58	-1.0
2,463,928	+		AO353_11185	0.58	+0.8
2,463,928	+		AO353_11185	0.58	-1.5
2,463,928	+		AO353_11185	0.58	-0.6
2,463,928	+		AO353_11185	0.58	-1.6
2,463,929	-		AO353_11185	0.58	-1.0
2,463,929	-		AO353_11185	0.58	+1.4
2,463,929	-		AO353_11185	0.58	-0.7
2,463,929	-		AO353_11185	0.58	-1.8
2,463,929	-		AO353_11185	0.58	-1.0
2,463,952	+		AO353_11185	0.60	-1.2
2,463,952	+		AO353_11185	0.60	-0.3
2,463,953	-		AO353_11185	0.60	-0.6
2,463,953	-		AO353_11185	0.60	+0.4
2,463,953	-		AO353_11185	0.60	-2.1
2,463,993	+		AO353_11185	0.63	-0.4
2,463,993	+		AO353_11185	0.63	-2.1
2,463,994	-		AO353_11185	0.63	-2.1
2,463,994	-		AO353_11185	0.63	-0.4
2,463,994	-		AO353_11185	0.63	-0.3
2,463,994	-		AO353_11185	0.63	-1.5
2,464,017	+		AO353_11185	0.65	-1.0
2,464,017	+		AO353_11185	0.65	-2.1
2,464,017	+		AO353_11185	0.65	+0.0
2,464,017	+		AO353_11185	0.65	+1.0
2,464,017	+		AO353_11185	0.65	-1.3
2,464,017	+		AO353_11185	0.65	-1.6
2,464,018	-		AO353_11185	0.65	+1.9
2,464,018	-		AO353_11185	0.65	-1.0
2,464,018	-		AO353_11185	0.65	-1.3
2,464,018	-		AO353_11185	0.65	-0.8
2,464,018	-		AO353_11185	0.65	-0.5
2,464,018	-		AO353_11185	0.65	-1.0
2,464,060	+		AO353_11185	0.68	-0.7
2,464,061	-		AO353_11185	0.68	+1.0
2,464,061	-		AO353_11185	0.68	+1.0
2,464,102	+		AO353_11185	0.71	-0.2
2,464,102	+		AO353_11185	0.71	-0.2
2,464,102	+		AO353_11185	0.71	-0.1
2,464,102	+		AO353_11185	0.71	-0.0
2,464,102	+		AO353_11185	0.71	-1.4
2,464,102	+		AO353_11185	0.71	-0.6
2,464,103	-		AO353_11185	0.71	+0.4
2,464,103	-		AO353_11185	0.71	+0.0
2,464,222	+		AO353_11185	0.80	+1.4
2,464,222	+		AO353_11185	0.80	-0.6
2,464,222	+		AO353_11185	0.80	-1.8
2,464,222	+		AO353_11185	0.80	-0.9
2,464,222	+		AO353_11185	0.80	-0.1
2,464,222	+		AO353_11185	0.80	-1.0
2,464,222	+		AO353_11185	0.80	-1.7
2,464,222	+		AO353_11185	0.80	-0.6
2,464,222	+		AO353_11185	0.80	-0.6
2,464,222	+		AO353_11185	0.80	+0.2
2,464,222	+		AO353_11185	0.80	-0.5
2,464,222	+		AO353_11185	0.80	-0.6
2,464,222	+		AO353_11185	0.80	-1.6
2,464,222	+		AO353_11185	0.80	+1.4
2,464,223	-		AO353_11185	0.80	-1.6
2,464,223	-		AO353_11185	0.80	-1.2
2,464,223	-		AO353_11185	0.80	-0.6
2,464,223	-		AO353_11185	0.80	-0.4
2,464,223	-		AO353_11185	0.80	+0.8
2,464,223	-		AO353_11185	0.80	-1.1
2,464,223	-		AO353_11185	0.80	+3.4
2,464,223	-		AO353_11185	0.80	+1.1
2,464,223	-		AO353_11185	0.80	-0.6
2,464,223	-		AO353_11185	0.80	+0.1
2,464,223	-		AO353_11185	0.80	+0.0
2,464,223	-		AO353_11185	0.80	-0.3
2,464,223	-		AO353_11185	0.80	-1.0
2,464,223	-		AO353_11185	0.80	-0.4
2,464,284	+		AO353_11185	0.85	-0.4
2,464,284	+		AO353_11185	0.85	-0.6
2,464,284	+		AO353_11185	0.85	-0.9
2,464,284	+		AO353_11185	0.85	-1.0
2,464,284	+		AO353_11185	0.85	-1.2
2,464,284	+		AO353_11185	0.85	-0.8
2,464,284	+		AO353_11185	0.85	-1.8
2,464,284	+		AO353_11185	0.85	-1.5
2,464,284	+		AO353_11185	0.85	+0.4
2,464,284	+		AO353_11185	0.85	-3.0
2,464,284	+		AO353_11185	0.85	-0.6
2,464,284	+		AO353_11185	0.85	-1.2
2,464,285	-		AO353_11185	0.85	-1.0
2,464,285	-		AO353_11185	0.85	+0.2
2,464,285	-		AO353_11185	0.85	-1.4
2,464,285	-		AO353_11185	0.85	-0.7
2,464,285	-		AO353_11185	0.85	-0.1
2,464,323	+		AO353_11185	0.88	-1.0
2,464,364	+				-0.1
2,464,364	+				-2.1
2,464,364	+				+2.0
2,464,364	+				-1.1
2,464,368	+				+1.4
2,464,368	+				-0.0
2,464,421	+				+0.4
2,464,421	+				-1.1
2,464,421	+				-0.4
2,464,421	+				-0.6
2,464,421	+				-0.6
2,464,421	+				-1.2
2,464,421	+				+0.5
2,464,421	+				-3.0
2,464,421	+				+0.4
2,464,422	-				-1.2
2,464,422	-				-1.6
2,464,422	-				-0.4
2,464,422	-				-0.5
2,464,422	-				-1.3
2,464,422	-				+1.6
2,464,503	+				-0.8
2,464,503	+				-2.6
2,464,503	+				+1.0
2,464,503	+				-1.0
2,464,503	+				-0.2
2,464,503	+				-1.3
2,464,503	+				+0.2
2,464,503	+				-0.2
2,464,504	-				-1.2
2,464,504	-				-1.0
2,464,504	-				+0.1
2,464,504	-				-1.0
2,464,504	-				-1.2
2,464,504	-				+0.0
2,464,504	-				-1.4
2,464,504	-				-0.2
2,464,507	+				+0.4
2,464,507	+				-0.2
2,464,507	+				-1.0
2,464,507	+				-1.4
2,464,507	+				-1.0
2,464,507	+				-0.4
2,464,507	+				-0.4
2,464,507	+				-1.6
2,464,507	+				-2.5
2,464,508	-				-1.4
2,464,508	-				-1.4
2,464,508	-				-1.2
2,464,508	-				-1.1
2,464,508	-				-1.7
2,464,508	-				-1.4
2,464,508	-				-1.0
2,464,508	-				+1.0
2,464,508	-				-1.2
2,464,508	-				-1.0
2,464,508	-				-0.5
2,464,508	-				-1.4
2,464,508	-				-1.0
2,464,508	-				-0.4
2,464,508	-				-1.0
2,464,511	+				-2.7
2,464,511	+				+0.7
2,464,511	+				-0.8
2,464,512	-				-1.4
2,464,916	+		AO353_11190	0.18	-0.6
2,464,916	+		AO353_11190	0.18	-2.0
2,464,916	+		AO353_11190	0.18	+0.4
2,464,916	+		AO353_11190	0.18	-0.6
2,464,917	-		AO353_11190	0.18	+1.1
2,464,917	-		AO353_11190	0.18	-2.0
2,464,951	+		AO353_11190	0.20	-0.8
2,464,951	+		AO353_11190	0.20	-1.1
2,464,951	+		AO353_11190	0.20	+0.0
2,464,951	+		AO353_11190	0.20	-2.1
2,464,952	-		AO353_11190	0.20	-0.8
2,464,952	-		AO353_11190	0.20	-0.5
2,464,952	-		AO353_11190	0.20	-1.6
2,464,952	-		AO353_11190	0.20	-1.2
2,465,033	+		AO353_11190	0.23	-0.6
2,465,033	+		AO353_11190	0.23	-0.4
2,465,033	+		AO353_11190	0.23	-0.6
2,465,033	+		AO353_11190	0.23	-2.3
2,465,034	-		AO353_11190	0.23	+0.0
2,465,034	-		AO353_11190	0.23	-1.0
2,465,034	-		AO353_11190	0.23	-1.2
2,465,177	+		AO353_11190	0.30	-1.0
2,465,177	+		AO353_11190	0.30	-1.0
2,465,177	+		AO353_11190	0.30	-2.0
2,465,177	+		AO353_11190	0.30	-0.0
2,465,177	+		AO353_11190	0.30	-0.6
2,465,177	+		AO353_11190	0.30	-1.6
2,465,177	+		AO353_11190	0.30	-1.2
2,465,177	+		AO353_11190	0.30	+0.8
2,465,178	-		AO353_11190	0.30	-1.3
2,465,178	-		AO353_11190	0.30	-1.2
2,465,178	-		AO353_11190	0.30	-0.0
2,465,178	-		AO353_11190	0.30	+0.5
2,465,178	-		AO353_11190	0.30	-1.1
2,465,197	+		AO353_11190	0.31	-2.1
2,465,251	+		AO353_11190	0.33	+2.6
2,465,251	+		AO353_11190	0.33	-1.0
2,465,251	+		AO353_11190	0.33	-0.9
2,465,252	-		AO353_11190	0.34	-1.2
2,465,252	-		AO353_11190	0.34	+0.5
2,465,252	-		AO353_11190	0.34	-1.0
2,465,297	+		AO353_11190	0.36	-2.0
2,465,298	-		AO353_11190	0.36	+0.1
2,465,298	-		AO353_11190	0.36	-3.5
2,465,298	-		AO353_11190	0.36	-1.9
2,465,630	+		AO353_11190	0.51	+0.4
2,465,630	+		AO353_11190	0.51	-0.9
2,465,630	+		AO353_11190	0.51	+0.0
2,465,630	+		AO353_11190	0.51	-1.0
2,465,660	-		AO353_11190	0.52	+0.4
2,465,762	+		AO353_11190	0.57	-1.8
2,465,763	-		AO353_11190	0.57	-0.7
2,465,810	+		AO353_11190	0.59	+2.0
2,465,810	+		AO353_11190	0.59	+2.4
2,465,810	+		AO353_11190	0.59	+0.1
2,465,810	+		AO353_11190	0.59	-2.4
2,465,810	+		AO353_11190	0.59	-1.2
2,465,810	+		AO353_11190	0.59	-2.0
2,465,810	+		AO353_11190	0.59	-0.6
2,465,810	+		AO353_11190	0.59	-2.0
2,465,810	+		AO353_11190	0.59	-1.5
2,465,810	+		AO353_11190	0.59	-0.1
2,465,810	+		AO353_11190	0.59	-1.8
2,465,810	+		AO353_11190	0.59	-1.5
2,465,811	-		AO353_11190	0.59	-1.3
2,465,811	-		AO353_11190	0.59	-0.9
2,465,811	-		AO353_11190	0.59	-0.4
2,465,811	-		AO353_11190	0.59	-2.6
2,465,811	-		AO353_11190	0.59	+0.0
2,465,811	-		AO353_11190	0.59	+0.1
2,465,811	-		AO353_11190	0.59	-1.0
2,465,811	-		AO353_11190	0.59	-1.4
2,466,006	-		AO353_11190	0.68	-0.4
2,466,131	+		AO353_11190	0.74	-1.2
2,466,131	+		AO353_11190	0.74	-1.9
2,466,215	+		AO353_11190	0.78	+0.4
2,466,216	-		AO353_11190	0.78	-0.1
2,466,216	-		AO353_11190	0.78	+0.2
2,466,219	+		AO353_11190	0.78	-0.1
2,466,219	+		AO353_11190	0.78	-1.0
2,466,219	+		AO353_11190	0.78	-3.3
2,466,220	-		AO353_11190	0.78	-0.2
2,466,220	-		AO353_11190	0.78	-1.8
2,466,220	-		AO353_11190	0.78	-0.0
2,466,220	-		AO353_11190	0.78	-0.8
2,466,220	-		AO353_11190	0.78	-1.4
2,466,220	-		AO353_11190	0.78	-2.3
2,466,220	-		AO353_11190	0.78	-2.2
2,466,220	-		AO353_11190	0.78	+0.2
2,466,247	+		AO353_11190	0.80	-1.2
2,466,281	+		AO353_11190	0.81	+0.1
2,466,282	-		AO353_11190	0.81	+0.1
2,466,282	-		AO353_11190	0.81	-1.9
2,466,487	+				-1.0
2,466,531	+				-1.0
2,466,531	+				-1.3
2,466,531	+				-1.4
2,466,531	+				-1.9
2,466,531	+				-1.3
2,466,531	+				+0.2
2,466,532	-				-0.6
2,466,532	-				-0.9
2,466,532	-				-0.5
2,466,618	+				-1.9
2,466,618	+				-0.2
2,466,618	+				+0.2
2,466,618	+				+0.4
2,466,618	+				-2.4
2,466,618	+				-1.1
2,466,619	-				-0.8
2,466,619	-				+0.8
2,466,683	+				-1.2
2,466,683	+				-0.6
2,466,683	+				-1.1
2,466,683	+				-1.6
2,466,683	+				-2.2
2,466,683	+				-1.3
2,466,683	+				-2.7
2,466,684	-				-1.5
2,466,684	-				-0.2
2,466,684	-				-2.4
2,466,684	-				-1.5
2,466,684	-				-0.7
2,466,684	-				+0.0
2,466,684	-				-1.1
2,466,684	-				-0.7
2,466,684	-				-2.8
2,466,684	-				+0.8
2,466,684	-				+1.0
2,466,684	-				-1.6
2,466,684	-				-0.9
2,466,684	-				-1.1
2,466,684	-				+0.7
2,466,684	-				-1.2
2,466,684	-				-1.8
2,466,684	-				-0.2
2,466,714	+				-1.0
2,467,022	+		AO353_11195	0.25	-0.8
2,467,022	+		AO353_11195	0.25	-0.1
2,467,023	-		AO353_11195	0.25	-1.6
2,467,023	-		AO353_11195	0.25	-1.6
2,467,023	-		AO353_11195	0.25	+0.4
2,467,075	+		AO353_11195	0.29	+0.0
2,467,075	+		AO353_11195	0.29	-1.0
2,467,075	+		AO353_11195	0.29	+0.5
2,467,076	-		AO353_11195	0.29	+0.4
2,467,076	-		AO353_11195	0.29	-1.6
2,467,173	+		AO353_11195	0.36	-1.6
2,467,173	+		AO353_11195	0.36	-1.1
2,467,173	+		AO353_11195	0.36	-1.0
2,467,173	+		AO353_11195	0.36	-1.6
2,467,173	+		AO353_11195	0.36	+1.4
2,467,173	+		AO353_11195	0.36	+0.2
2,467,174	-		AO353_11195	0.36	-0.6
2,467,174	-		AO353_11195	0.36	+1.4
2,467,174	-		AO353_11195	0.36	-1.4
2,467,174	-		AO353_11195	0.36	-2.0
2,467,174	-		AO353_11195	0.36	-1.3
2,467,174	-		AO353_11195	0.36	-0.5
2,467,228	+		AO353_11195	0.40	-1.9
2,467,228	+		AO353_11195	0.40	-0.9
2,467,229	-		AO353_11195	0.40	-0.4
2,467,229	-		AO353_11195	0.40	-0.6
2,467,229	-		AO353_11195	0.40	+1.4
2,467,229	-		AO353_11195	0.40	+0.4
2,467,229	-		AO353_11195	0.40	-1.4
2,467,229	-		AO353_11195	0.40	+2.4
2,467,278	+		AO353_11195	0.44	-2.3
2,467,412	+		AO353_11195	0.54	-0.2