Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08535

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
1,873,822	-		AO353_08525	0.58	+0.7
1,874,182	+		AO353_08530	0.24	+1.4
1,874,183	-		AO353_08530	0.24	-1.7
1,874,183	-		AO353_08530	0.24	+0.9
1,874,183	-		AO353_08530	0.24	-0.5
1,874,183	-		AO353_08530	0.24	+0.2
1,874,230	+		AO353_08530	0.32	+1.3
1,874,230	+		AO353_08530	0.32	-2.0
1,874,230	+		AO353_08530	0.32	-0.6
1,874,230	+		AO353_08530	0.32	+1.1
1,874,230	+		AO353_08530	0.32	+0.5
1,874,230	+		AO353_08530	0.32	+0.2
1,874,231	-		AO353_08530	0.32	+0.4
1,874,231	-		AO353_08530	0.32	+0.5
1,874,231	-		AO353_08530	0.32	-0.1
1,874,231	-		AO353_08530	0.32	+1.3
1,874,231	-		AO353_08530	0.32	-1.3
1,874,231	-		AO353_08530	0.32	-1.9
1,874,231	-		AO353_08530	0.32	+2.3
1,874,290	+		AO353_08530	0.41	+1.9
1,874,291	-		AO353_08530	0.42	+1.1
1,874,395	+		AO353_08530	0.58	-1.3
1,874,395	+		AO353_08530	0.58	-0.3
1,874,395	+		AO353_08530	0.58	-0.1
1,874,395	+		AO353_08530	0.58	+0.4
1,874,395	+		AO353_08530	0.58	+2.1
1,874,396	-		AO353_08530	0.58	-0.3
1,874,396	-		AO353_08530	0.58	+0.7
1,874,396	-				-1.0
1,874,396	-		AO353_08530	0.58	-0.5
1,874,396	-		AO353_08530	0.58	-1.9
1,874,396	-		AO353_08530	0.58	+1.3
1,874,396	-		AO353_08530	0.58	+0.3
1,874,396	-		AO353_08530	0.58	-1.0
1,874,396	-		AO353_08530	0.58	-2.4
1,874,396	-		AO353_08530	0.58	-0.4
1,874,438	+		AO353_08530	0.65	+0.7
1,874,438	+		AO353_08530	0.65	+1.1
1,874,439	-		AO353_08530	0.65	-0.5
1,874,439	-		AO353_08530	0.65	-0.3
1,874,526	-		AO353_08530	0.79	+0.7
1,874,526	-		AO353_08530	0.79	-0.4
1,874,573	+		AO353_08530	0.86	+0.1
1,874,573	+		AO353_08530	0.86	-2.1
1,874,574	-		AO353_08530	0.86	+0.3
1,874,597	+				+0.2
1,874,598	-				-1.7
1,874,598	-				+0.6
1,874,615	+				-0.3
1,874,615	+				+1.1
1,874,615	+				-0.0
1,874,615	+				+0.2
1,874,616	-				+1.7
1,874,616	-				-0.6
1,874,616	-				+0.3
1,874,619	+				-0.6
1,874,620	-				-0.9
1,874,620	-				-0.4
1,874,620	-				+0.6
1,874,620	-				-1.1
1,874,620	-				+1.5
1,874,620	-				-1.7
1,874,643	+				-2.0
1,874,643	+				+0.2
1,874,643	+				+1.0
1,874,644	-				+4.6
1,874,644	-				-1.7
1,874,644	-				-0.2
1,874,644	-				-1.1
1,874,644	-				-1.3
1,874,644	-				-2.4
1,874,644	-				-1.1
1,874,660	+				-1.5
1,874,660	+				+2.1
1,874,660	+				+1.1
1,874,660	+				-0.9
1,874,660	+				-0.2
1,874,660	+				+1.3
1,874,661	-				-0.7
1,874,661	-				+1.3
1,874,661	-				+1.3
1,874,661	-				-0.3
1,874,661	-				-1.7
1,874,661	-				-0.3
1,874,661	-				+0.5
1,874,661	-				-0.0
1,874,661	-				-0.7
1,874,661	-				-0.9
1,874,661	-				-1.9
1,874,661	-				-1.0
1,874,661	-				+0.2
1,874,661	-				+0.5
1,874,661	-				+1.0
1,874,663	+				-1.1
1,874,663	+				-1.5
1,874,663	+				+0.2
1,874,663	+				+0.7
1,874,663	+				-0.3
1,874,664	-				-2.3
1,874,664	-				+0.9
1,874,664	-				-0.0
1,874,664	-				-0.0
1,874,664	-				-0.7
1,874,696	+				-0.6
1,874,715	-				+2.5
1,874,732	-				-1.2
1,874,768	+				+0.8
1,874,768	+				+1.2
1,874,768	+				+0.7
1,874,769	-				-1.0
1,874,769	-				+0.9
1,874,792	+				-0.5
1,874,793	-				+0.7
1,874,793	-				-1.7
1,874,793	-				-0.3
1,874,865	+				-0.3
1,874,865	+				-0.6
1,874,865	+				-1.1
1,874,865	+				+0.1
1,874,865	+				-0.9
1,874,865	+				-1.9
1,874,865	+				-0.3
1,874,865	+				+0.5
1,874,865	+				+0.8
1,874,865	+				-0.9
1,874,865	+				-1.1
1,874,866	-				-0.3
1,874,866	-				-0.3
1,874,866	-				-0.3
1,874,866	-				-0.8
1,874,866	-				-2.5
1,874,866	-				-1.1
1,874,866	-				-0.7
1,874,935	-		AO353_08535	0.19	-1.0
1,875,396	+		AO353_08535	0.80	-2.6
1,875,396	+		AO353_08535	0.80	+0.3
1,875,396	+		AO353_08535	0.80	-0.5
1,875,396	+		AO353_08535	0.80	-0.7
1,875,396	+		AO353_08535	0.80	-1.5
1,875,396	+		AO353_08535	0.80	+0.7
1,875,396	+		AO353_08535	0.80	+0.0
1,875,396	+		AO353_08535	0.80	-0.3
1,875,396	+		AO353_08535	0.80	-0.8
1,875,396	+		AO353_08535	0.80	-0.5
1,875,396	+		AO353_08535	0.80	-1.0
1,875,396	+		AO353_08535	0.80	-0.5
1,875,396	+		AO353_08535	0.80	-0.7
1,875,396	+		AO353_08535	0.80	-0.9
1,875,396	+		AO353_08535	0.80	-0.1
1,875,396	+		AO353_08535	0.80	+0.5
1,875,396	+		AO353_08535	0.80	-0.6
1,875,396	+		AO353_08535	0.80	+0.3
1,875,396	+		AO353_08535	0.80	-1.3
1,875,396	+		AO353_08535	0.80	-1.0
1,875,396	+		AO353_08535	0.80	-0.6
1,875,396	+		AO353_08535	0.80	+2.0
1,875,396	+		AO353_08535	0.80	-1.4
1,875,397	-		AO353_08535	0.80	-1.0
1,875,397	-		AO353_08535	0.80	-1.0
1,875,397	-		AO353_08535	0.80	-0.0
1,875,397	-		AO353_08535	0.80	-1.6
1,875,397	-		AO353_08535	0.80	+1.3
1,875,397	-		AO353_08535	0.80	+0.7
1,875,397	-		AO353_08535	0.80	+0.3
1,875,397	-		AO353_08535	0.80	-1.3
1,875,397	-		AO353_08535	0.80	+0.3
1,875,397	-		AO353_08535	0.80	-1.4
1,875,397	-		AO353_08535	0.80	-2.4
1,875,397	-		AO353_08535	0.80	-3.5
1,875,397	-		AO353_08535	0.80	-1.3
1,875,397	-		AO353_08535	0.80	+0.6
1,875,397	-		AO353_08535	0.80	-2.1
1,875,397	-		AO353_08535	0.80	-2.9
1,875,397	-		AO353_08535	0.80	-2.0
1,875,397	-		AO353_08535	0.80	-0.2
1,875,397	-		AO353_08535	0.80	-0.8
1,875,397	-		AO353_08535	0.80	-1.2
1,875,397	-		AO353_08535	0.80	+0.5
1,875,397	-		AO353_08535	0.80	-0.3
1,875,397	-		AO353_08535	0.80	-0.7
1,875,397	-		AO353_08535	0.80	-0.8
1,875,397	-		AO353_08535	0.80	-0.5
1,875,397	-		AO353_08535	0.80	-1.0
1,875,397	-		AO353_08535	0.80	-0.4
1,875,397	-		AO353_08535	0.80	-1.8
1,875,397	-		AO353_08535	0.80	-1.1
1,875,402	+		AO353_08535	0.81	-1.4
1,875,403	-		AO353_08535	0.81	-1.3
1,875,471	+				-1.7
1,875,471	+				-0.7
1,875,471	+				-0.3
1,875,471	+				-1.9
1,875,471	+				-0.7
1,875,471	+				-0.5
1,875,472	-				+3.3
1,875,472	-				-1.7
1,875,472	-				-1.4
1,875,472	-				-1.4
1,875,536	+				-0.7
1,875,634	+				-1.7
1,875,664	+				-0.5
1,875,664	+				-0.3
1,875,664	+				-0.3
1,875,665	-				+0.6
1,875,665	-				-0.2
1,875,665	-				-0.0
1,875,716	+				+2.3
1,875,716	+				+1.7
1,875,716	+				+0.4
1,875,716	+				+1.0
1,875,716	+				+1.2
1,875,716	+				+0.3
1,875,717	-				+1.8
1,875,717	-				+0.6
1,875,717	-				+1.5
1,875,717	-				-0.7
1,875,717	-				-0.2
1,876,049	+		AO353_08540	0.39	-0.9
1,876,049	+		AO353_08540	0.39	+1.3
1,876,049	+		AO353_08540	0.39	+1.6
1,876,050	-		AO353_08540	0.40	+0.4
1,876,050	-		AO353_08540	0.40	+1.9
1,876,050	-		AO353_08540	0.40	+2.3
1,876,050	-		AO353_08540	0.40	-1.1
1,876,050	-		AO353_08540	0.40	-0.5
1,876,052	+		AO353_08540	0.40	+0.6
1,876,052	+		AO353_08540	0.40	+1.2
1,876,052	+		AO353_08540	0.40	-1.3
1,876,052	+		AO353_08540	0.40	+0.0
1,876,052	+		AO353_08540	0.40	+0.5
1,876,052	+		AO353_08540	0.40	-0.9
1,876,052	+		AO353_08540	0.40	-0.7
1,876,052	+		AO353_08540	0.40	+0.3
1,876,053	-		AO353_08540	0.40	+0.6
1,876,053	-		AO353_08540	0.40	+0.3
1,876,053	-		AO353_08540	0.40	-0.3
1,876,053	-		AO353_08540	0.40	+0.5
1,876,053	-		AO353_08540	0.40	+1.5
1,876,053	-		AO353_08540	0.40	+1.1
1,876,053	-		AO353_08540	0.40	+0.5
1,876,053	-		AO353_08540	0.40	+1.0
1,876,053	-		AO353_08540	0.40	+0.6
1,876,105	+		AO353_08540	0.45	-0.7
1,876,106	-		AO353_08540	0.45	-1.4
1,876,176	+		AO353_08540	0.53	+1.1
1,876,256	+		AO353_08540	0.61	+1.0
1,876,256	+		AO353_08540	0.61	-0.9
1,876,256	+		AO353_08540	0.61	-1.0
1,876,257	-		AO353_08540	0.61	+1.4
1,876,388	+		AO353_08540	0.75	+0.2
1,876,388	+		AO353_08540	0.75	+0.2
1,876,388	+		AO353_08540	0.75	+1.1
1,876,388	+		AO353_08540	0.75	+0.6
1,876,388	+		AO353_08540	0.75	-0.4
1,876,388	+		AO353_08540	0.75	+1.3
1,876,388	+		AO353_08540	0.75	+1.1
1,876,388	+		AO353_08540	0.75	+0.2
1,876,388	+		AO353_08540	0.75	+1.2
1,876,389	-		AO353_08540	0.75	-0.4
1,876,389	-		AO353_08540	0.75	+0.6
1,876,389	-		AO353_08540	0.75	-0.0
1,876,389	-		AO353_08540	0.75	+1.0
1,876,389	-		AO353_08540	0.75	-0.1
1,876,389	-		AO353_08540	0.75	-1.0
1,876,457	+		AO353_08540	0.82	+1.3
1,876,458	-		AO353_08540	0.82	+1.5
1,876,526	+		AO353_08540	0.89	+0.3
1,876,526	+		AO353_08540	0.89	+1.4
1,876,526	+		AO353_08540	0.89	+0.5
1,876,538	+				-0.2
1,876,538	+				-0.2
1,876,538	+				+0.6
1,876,538	+				-1.5
1,876,539	-				+0.3
1,876,539	-				-1.0
1,876,539	-				-0.2
1,876,539	-				+1.1