Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07805

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
1,719,590	+				+0.3
1,719,590	+				+1.0
1,719,591	-				+0.3
1,719,591	-				-1.0
1,719,627	+				-0.1
1,719,627	+				+0.8
1,719,627	+				+0.6
1,719,628	-				-0.3
1,719,628	-				+0.4
1,719,628	-				-0.3
1,719,628	-				-0.0
1,719,714	+				-0.6
1,719,714	+				+2.9
1,719,714	+				-1.3
1,719,714	+				+0.4
1,719,714	+				+0.0
1,719,715	-				-0.6
1,719,715	-				+1.1
1,719,715	-				+0.4
1,719,790	+				+0.1
1,719,791	-				+0.9
1,719,837	+				-0.7
1,719,837	+				+0.6
1,719,998	-		AO353_07800	0.24	-0.7
1,719,998	-		AO353_07800	0.24	+0.3
1,720,095	+		AO353_07800	0.40	-0.0
1,720,095	+		AO353_07800	0.40	+2.1
1,720,095	+		AO353_07800	0.40	+0.9
1,720,095	+		AO353_07800	0.40	-0.1
1,720,096	-		AO353_07800	0.40	-0.4
1,720,096	-		AO353_07800	0.40	-1.2
1,720,096	-		AO353_07800	0.40	-0.4
1,720,096	-		AO353_07800	0.40	-0.3
1,720,096	-		AO353_07800	0.40	+0.7
1,720,096	-		AO353_07800	0.40	-0.7
1,720,217	+		AO353_07800	0.60	+0.7
1,720,217	+		AO353_07800	0.60	+0.4
1,720,217	+		AO353_07800	0.60	+0.8
1,720,218	-		AO353_07800	0.60	+1.0
1,720,218	-		AO353_07800	0.60	-1.8
1,720,218	-		AO353_07800	0.60	-0.3
1,720,218	-		AO353_07800	0.60	+1.0
1,720,252	+		AO353_07800	0.66	+2.9
1,720,252	+		AO353_07800	0.66	-0.1
1,720,406	-				-0.3
1,720,411	+				+0.7
1,720,411	+				-1.4
1,720,411	+				-0.7
1,720,411	+				-0.1
1,720,411	+				+0.6
1,720,411	+				-1.4
1,720,411	+				-0.3
1,720,411	+				+1.1
1,720,411	+				-0.0
1,720,412	-				-1.1
1,720,412	-				-1.7
1,720,412	-				-1.6
1,720,412	-				-1.7
1,720,412	-				-1.3
1,720,412	-				-0.4
1,720,412	-				+0.7
1,720,412	-				+1.1
1,720,412	-				-0.3
1,720,412	-				-1.0
1,720,412	-				-0.5
1,720,412	-				-0.6
1,720,413	+				+1.3
1,720,413	+				+2.3
1,720,413	+				+0.4
1,720,413	+				+1.6
1,720,413	+				+0.6
1,720,413	+				-0.7
1,720,413	+				-0.7
1,720,413	+				-1.0
1,720,413	+				+0.9
1,720,413	+				+0.2
1,720,413	+				+1.2
1,720,413	+				+0.7
1,720,413	+				+0.7
1,720,413	+				-2.0
1,720,414	-				-0.7
1,720,414	-				-0.3
1,720,414	-				+0.3
1,720,414	-				-2.0
1,720,414	-				-0.4
1,720,414	-				-0.7
1,720,414	-				-0.5
1,720,414	-				+0.4
1,720,414	-				+0.4
1,720,414	-				-0.5
1,720,414	-				-0.7
1,720,414	-				-2.2
1,720,445	+				+0.4
1,720,445	+				+0.1
1,720,445	+				-0.9
1,720,445	+				-0.0
1,720,456	+				-0.0
1,720,456	+				-1.6
1,720,457	-				-2.2
1,720,457	-				-0.1
1,720,503	-				-0.3
1,720,530	-				+0.3
1,720,533	+				-0.0
1,720,533	+				+0.2
1,720,533	+				-0.0
1,720,533	+				-0.1
1,720,533	+				-0.2
1,720,533	+				-0.2
1,720,533	+				-0.2
1,720,533	+				+0.0
1,720,533	+				-0.8
1,720,533	+				+0.7
1,720,533	+				+0.3
1,720,533	+				-0.3
1,720,533	+				-1.3
1,720,534	-				-1.4
1,720,534	-				-0.3
1,720,534	-				-0.9
1,720,534	-				-0.5
1,720,534	-				+0.7
1,720,534	-				-1.0
1,720,534	-				-1.2
1,720,534	-				+0.1
1,720,534	-				+1.4
1,720,554	+				+0.1
1,720,554	+				+0.3
1,720,554	+				-1.3
1,720,554	+				+1.9
1,720,554	+				-0.5
1,720,555	-				+1.3
1,720,582	+				-2.2
1,720,582	+				-0.7
1,720,583	-				-1.0
1,720,583	-				+0.3
1,720,597	+				-1.5
1,720,597	+				+0.9
1,720,846	+		AO353_07805	0.20	-0.7
1,720,846	+		AO353_07805	0.20	-2.2
1,720,846	+		AO353_07805	0.20	-2.9
1,720,862	-		AO353_07805	0.21	+1.3
1,720,862	-		AO353_07805	0.21	-0.1
1,720,889	+		AO353_07805	0.23	+0.3
1,720,889	+		AO353_07805	0.23	-2.0
1,720,889	+		AO353_07805	0.23	-0.7
1,720,890	-		AO353_07805	0.23	+0.3
1,720,890	-		AO353_07805	0.23	-0.3
1,720,890	-		AO353_07805	0.23	+0.3
1,720,897	+		AO353_07805	0.23	+1.3
1,720,897	+		AO353_07805	0.23	+0.3
1,720,897	+		AO353_07805	0.23	+0.7
1,720,898	-		AO353_07805	0.23	-1.9
1,720,898	-		AO353_07805	0.23	-0.2
1,720,898	-		AO353_07805	0.23	-1.5
1,720,900	+		AO353_07805	0.23	-1.9
1,720,900	+		AO353_07805	0.23	-0.7
1,720,900	+		AO353_07805	0.23	-1.4
1,720,901	-		AO353_07805	0.23	-0.5
1,720,901	-		AO353_07805	0.23	-0.4
1,720,901	-		AO353_07805	0.23	-0.3
1,720,901	-		AO353_07805	0.23	+1.0
1,720,901	-		AO353_07805	0.23	-0.8
1,720,964	-		AO353_07805	0.28	-0.0
1,720,964	-		AO353_07805	0.28	-1.4
1,721,014	+		AO353_07805	0.31	-1.5
1,721,015	-		AO353_07805	0.31	-0.3
1,721,015	-		AO353_07805	0.31	+0.8
1,721,128	+		AO353_07805	0.39	-1.9
1,721,128	+		AO353_07805	0.39	-0.4
1,721,128	+		AO353_07805	0.39	-0.3
1,721,128	+		AO353_07805	0.39	-2.4
1,721,129	-		AO353_07805	0.39	-0.1
1,721,129	-		AO353_07805	0.39	-0.0
1,721,129	-		AO353_07805	0.39	-0.3
1,721,392	+		AO353_07805	0.57	-0.7
1,721,392	+		AO353_07805	0.57	-1.1
1,721,392	+		AO353_07805	0.57	-1.0
1,721,393	-		AO353_07805	0.57	-0.7
1,721,393	-		AO353_07805	0.57	+0.9
1,721,393	-		AO353_07805	0.57	-1.5
1,721,393	-		AO353_07805	0.57	+0.6
1,721,393	-		AO353_07805	0.57	-1.2
1,721,520	+		AO353_07805	0.66	-0.3
1,721,520	+		AO353_07805	0.66	+0.3
1,721,572	+		AO353_07805	0.69	-1.5
1,721,572	+		AO353_07805	0.69	-2.0
1,721,572	+		AO353_07805	0.69	-1.0
1,721,586	+		AO353_07805	0.70	-1.3
1,721,586	+		AO353_07805	0.70	-1.3
1,721,587	-		AO353_07805	0.70	-0.5
1,721,587	-		AO353_07805	0.70	-1.0
1,721,746	+		AO353_07805	0.81	-0.3
1,721,746	+		AO353_07805	0.81	-1.0
1,721,746	+		AO353_07805	0.81	-0.3
1,721,747	-		AO353_07805	0.81	-0.3
1,721,747	-		AO353_07805	0.81	-0.0
1,721,747	-		AO353_07805	0.81	+0.0
1,721,747	-		AO353_07805	0.81	+0.7
1,721,865	+		AO353_07805	0.89	-1.0
1,721,920	+				-0.5
1,722,254	+				+0.3
1,722,255	-				-0.1
1,722,255	-				-0.8
1,722,260	+				-1.4
1,722,260	+				-0.3
1,722,260	+				-0.1
1,722,260	+				+0.5
1,722,260	+				+0.3
1,722,260	+				+1.3
1,722,260	+				+1.3
1,722,260	+				-2.2
1,722,260	+				-1.3
1,722,260	+				-0.7
1,722,260	+				-0.6
1,722,260	+				+1.0
1,722,260	+				+1.3
1,722,260	+				-0.4
1,722,260	+				-0.7
1,722,261	-				-1.2
1,722,261	-				+0.7
1,722,261	-				-0.6
1,722,261	-				+0.7
1,722,261	-				-0.4
1,722,261	-				-2.1
1,722,261	-				-0.0
1,722,261	-				+0.5
1,722,261	-				-0.3
1,722,261	-				+0.7
1,722,261	-				+0.0
1,722,261	-				-1.5
1,722,369	+				-0.5
1,722,369	+				+3.3
1,722,425	+		AO353_07810	0.11	-0.6
1,722,426	-		AO353_07810	0.11	-0.2
1,722,438	-		AO353_07810	0.12	-1.2
1,722,533	+		AO353_07810	0.17	+0.6
1,722,533	+		AO353_07810	0.17	+1.8
1,722,533	+		AO353_07810	0.17	-1.7
1,722,533	+		AO353_07810	0.17	-1.2
1,722,533	+		AO353_07810	0.17	-2.7
1,722,533	+		AO353_07810	0.17	+0.7
1,722,533	+		AO353_07810	0.17	-1.6
1,722,533	+		AO353_07810	0.17	-0.7
1,722,533	+		AO353_07810	0.17	-0.8
1,722,533	+		AO353_07810	0.17	-1.2
1,722,533	+		AO353_07810	0.17	-0.0
1,722,533	+		AO353_07810	0.17	+0.6
1,722,533	+		AO353_07810	0.17	-2.4
1,722,534	-		AO353_07810	0.17	-0.3
1,722,534	-		AO353_07810	0.17	+0.4
1,722,534	-		AO353_07810	0.17	-0.3
1,722,534	-		AO353_07810	0.17	-1.8
1,722,534	-		AO353_07810	0.17	+1.9
1,722,534	-		AO353_07810	0.17	-0.2
1,722,534	-		AO353_07810	0.17	-0.2
1,722,534	-		AO353_07810	0.17	-0.2
1,722,534	-		AO353_07810	0.17	+1.3
1,722,534	-		AO353_07810	0.17	+0.2
1,722,534	-		AO353_07810	0.17	-1.7
1,722,557	+		AO353_07810	0.18	-1.0
1,722,557	+		AO353_07810	0.18	-1.3
1,722,558	-		AO353_07810	0.19	+0.1
1,722,558	-		AO353_07810	0.19	+0.5
1,722,599	+		AO353_07810	0.21	-1.3
1,722,599	+		AO353_07810	0.21	-0.0
1,722,599	+		AO353_07810	0.21	+0.5
1,722,599	+		AO353_07810	0.21	+0.9
1,722,600	-		AO353_07810	0.21	-0.5
1,722,617	+		AO353_07810	0.22	-1.5
1,722,618	-		AO353_07810	0.22	+0.3
1,722,659	+		AO353_07810	0.24	+1.1
1,722,659	+		AO353_07810	0.24	+1.5
1,722,697	+		AO353_07810	0.27	-0.0
1,722,697	+		AO353_07810	0.27	+1.9
1,722,744	+		AO353_07810	0.29	+0.1
1,722,744	+		AO353_07810	0.29	-0.6
1,722,744	+		AO353_07810	0.29	-2.3
1,722,744	+		AO353_07810	0.29	-2.5
1,722,744	+		AO353_07810	0.29	-1.0
1,722,744	+		AO353_07810	0.29	+0.4
1,722,744	+		AO353_07810	0.29	-1.3
1,722,745	-		AO353_07810	0.30	-0.3
1,722,745	-		AO353_07810	0.30	-1.0
1,722,745	-		AO353_07810	0.30	-0.0
1,722,745	-		AO353_07810	0.30	-1.4
1,722,745	-		AO353_07810	0.30	-0.4
1,722,745	-		AO353_07810	0.30	-0.4
1,722,827	-		AO353_07810	0.34	-1.7
1,722,951	+		AO353_07810	0.42	+0.1
1,722,951	+		AO353_07810	0.42	-0.6
1,722,951	+		AO353_07810	0.42	+0.2
1,722,951	+		AO353_07810	0.42	+0.2
1,722,952	-		AO353_07810	0.42	-0.3
1,722,952	-		AO353_07810	0.42	-0.3
1,722,952	-		AO353_07810	0.42	-0.0
1,722,952	-		AO353_07810	0.42	+1.7
1,722,956	+		AO353_07810	0.42	-0.0