Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07480

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
1,644,452	+		AO353_07470	0.86	+2.9
1,644,453	-		AO353_07470	0.86	-0.1
1,644,716	+		AO353_07475	0.12	+0.1
1,644,716	+		AO353_07475	0.12	+2.8
1,644,717	-		AO353_07475	0.12	+1.1
1,644,717	-		AO353_07475	0.12	+1.0
1,644,717	-		AO353_07475	0.12	+1.4
1,644,790	+		AO353_07475	0.23	+1.0
1,644,829	+		AO353_07475	0.28	+3.2
1,644,893	-		AO353_07475	0.38	+3.1
1,644,914	+		AO353_07475	0.41	+1.7
1,644,915	-		AO353_07475	0.41	-0.0
1,644,997	-		AO353_07475	0.53	-0.2
1,644,997	-		AO353_07475	0.53	-0.1
1,644,997	-		AO353_07475	0.53	+0.8
1,644,997	-		AO353_07475	0.53	+2.3
1,644,997	-		AO353_07475	0.53	+1.6
1,645,022	+		AO353_07475	0.56	-0.0
1,645,022	+		AO353_07475	0.56	+1.9
1,645,022	+		AO353_07475	0.56	+1.9
1,645,023	-		AO353_07475	0.56	+0.4
1,645,123	+		AO353_07475	0.71	-0.3
1,645,124	-		AO353_07475	0.71	+1.5
1,645,124	-		AO353_07475	0.71	+2.3
1,645,129	+		AO353_07475	0.71	+3.5
1,645,129	+		AO353_07475	0.71	+0.5
1,645,130	-		AO353_07475	0.72	+2.5
1,645,130	-		AO353_07475	0.72	+2.3
1,645,130	-		AO353_07475	0.72	+3.0
1,645,130	-		AO353_07475	0.72	+1.6
1,645,130	-		AO353_07475	0.72	+1.3
1,645,130	-		AO353_07475	0.72	+3.9
1,645,130	-		AO353_07475	0.72	-1.0
1,645,130	-		AO353_07475	0.72	+1.2
1,645,130	-		AO353_07475	0.72	+1.5
1,645,130	-		AO353_07475	0.72	-0.3
1,645,172	+		AO353_07475	0.78	+1.2
1,645,296	+				+0.3
1,645,296	+				+3.4
1,645,296	+				+0.0
1,645,297	-				+0.5
1,645,300	+				+1.7
1,645,316	-				+1.0
1,645,316	-				+1.6
1,645,323	-				+1.7
1,645,346	+				-0.8
1,645,347	-				-0.7
1,645,371	-				+1.2
1,645,371	-				+0.5
1,645,429	+				+1.4
1,645,466	+				+1.2
1,645,466	+				+1.9
1,645,466	+				+1.4
1,645,466	+				+2.4
1,645,466	+				+0.6
1,645,467	-				+0.3
1,645,467	-				+0.1
1,645,467	-				+1.6
1,645,467	-				-1.5
1,645,585	+		AO353_07480	0.17	+2.7
1,645,586	-		AO353_07480	0.17	+1.3
1,645,586	-		AO353_07480	0.17	+3.3
1,645,615	+		AO353_07480	0.20	+2.3
1,645,615	+		AO353_07480	0.20	+1.0
1,645,615	+		AO353_07480	0.20	-0.7
1,645,615	+		AO353_07480	0.20	+0.4
1,645,615	+		AO353_07480	0.20	+1.9
1,645,616	-		AO353_07480	0.20	+2.3
1,645,616	-		AO353_07480	0.20	+1.4
1,645,616	-		AO353_07480	0.20	+1.0
1,645,616	-		AO353_07480	0.20	+2.0
1,645,616	-		AO353_07480	0.20	-1.7
1,645,616	-		AO353_07480	0.20	+0.8
1,645,616	-		AO353_07480	0.20	+1.9
1,645,616	-		AO353_07480	0.20	-0.3
1,645,616	-		AO353_07480	0.20	+0.3
1,645,622	+		AO353_07480	0.21	+3.9
1,645,622	+		AO353_07480	0.21	-0.7
1,645,622	+		AO353_07480	0.21	+0.9
1,645,622	+		AO353_07480	0.21	+1.3
1,645,622	+		AO353_07480	0.21	+1.7
1,645,622	+		AO353_07480	0.21	+1.8
1,645,623	-		AO353_07480	0.21	-2.0
1,645,623	-		AO353_07480	0.21	-0.7
1,645,623	-		AO353_07480	0.21	+1.3
1,645,623	-		AO353_07480	0.21	+2.0
1,645,623	-		AO353_07480	0.21	+3.3
1,645,623	-		AO353_07480	0.21	-1.0
1,645,767	+		AO353_07480	0.36	-0.3
1,645,767	+		AO353_07480	0.36	+1.8
1,645,768	-		AO353_07480	0.36	+1.1
1,645,768	-		AO353_07480	0.36	+2.0
1,645,794	+		AO353_07480	0.39	+0.9
1,645,794	+		AO353_07480	0.39	-0.3
1,645,794	+		AO353_07480	0.39	+2.2
1,645,802	+		AO353_07480	0.40	-0.5
1,645,802	+		AO353_07480	0.40	+3.6
1,645,802	+		AO353_07480	0.40	+0.9
1,645,802	+		AO353_07480	0.40	+2.1
1,645,802	+		AO353_07480	0.40	+2.9
1,645,802	+		AO353_07480	0.40	-0.5
1,645,802	+		AO353_07480	0.40	+0.8
1,645,802	+		AO353_07480	0.40	+0.3
1,645,803	-		AO353_07480	0.40	+2.5
1,645,803	-		AO353_07480	0.40	+1.0
1,645,803	-		AO353_07480	0.40	+2.0
1,645,803	-		AO353_07480	0.40	+1.3
1,645,868	+		AO353_07480	0.47	+3.0
1,645,868	+		AO353_07480	0.47	+1.3
1,645,868	+		AO353_07480	0.47	+1.7
1,645,868	+		AO353_07480	0.47	+2.2
1,645,868	+		AO353_07480	0.47	+1.1
1,645,869	-		AO353_07480	0.47	+0.7
1,645,869	-		AO353_07480	0.47	+1.2
1,645,893	+		AO353_07480	0.50	-0.0
1,645,893	+		AO353_07480	0.50	+1.6
1,645,893	+		AO353_07480	0.50	+2.5
1,645,893	+		AO353_07480	0.50	+2.4
1,645,893	+		AO353_07480	0.50	-1.3
1,645,894	-		AO353_07480	0.50	+2.4
1,645,910	+		AO353_07480	0.52	+3.3
1,645,910	+		AO353_07480	0.52	-1.3
1,645,910	+		AO353_07480	0.52	-0.7
1,645,910	+		AO353_07480	0.52	+2.9
1,645,910	+		AO353_07480	0.52	+2.0
1,645,910	+		AO353_07480	0.52	+0.9
1,645,911	-		AO353_07480	0.52	+4.0
1,645,911	-		AO353_07480	0.52	+1.1
1,645,911	-		AO353_07480	0.52	+1.6
1,645,911	-		AO353_07480	0.52	-1.7
1,646,079	+		AO353_07480	0.70	+0.9
1,646,079	+		AO353_07480	0.70	+1.5
1,646,079	+				-0.3
1,646,079	+		AO353_07480	0.70	-1.0
1,646,080	-		AO353_07480	0.70	+0.1
1,646,080	-		AO353_07480	0.70	+0.5
1,646,080	-		AO353_07480	0.70	+1.6
1,646,080	-		AO353_07480	0.70	+1.1
1,646,080	-		AO353_07480	0.70	+1.4
1,646,080	-		AO353_07480	0.70	+2.1
1,646,080	-		AO353_07480	0.70	+0.3
1,646,080	-		AO353_07480	0.70	+3.5
1,646,148	+		AO353_07480	0.77	+3.7
1,646,229	+		AO353_07480	0.86	-0.3
1,646,229	+		AO353_07480	0.86	+0.3
1,646,229	+		AO353_07480	0.86	+2.5
1,646,230	-		AO353_07480	0.86	-0.9
1,646,230	-		AO353_07480	0.86	+1.9
1,646,230	-		AO353_07480	0.86	+2.5
1,646,340	+				+1.1
1,646,349	+				+1.9
1,646,349	+				+3.6
1,646,349	+				+1.0
1,646,349	+				-0.9
1,646,350	-				+1.9
1,646,350	-				-0.3
1,646,350	-				+0.6
1,646,350	-				+0.5
1,646,350	-				-0.1
1,646,350	-				+3.4
1,646,350	-				+3.3
1,646,372	+				+1.3
1,646,372	+				+0.5
1,646,373	-				-0.1
1,646,373	-				+0.3
1,646,377	+				+0.3
1,646,377	+				+0.9
1,646,378	-				-0.1
1,646,378	-				+1.5
1,646,463	+				-1.9
1,646,463	+				-0.2
1,646,463	+				+0.5
1,646,463	+				-0.7
1,646,463	+				+0.9
1,646,463	+				+0.3
1,646,464	-				+0.9
1,646,464	-				-0.3
1,646,464	-				+0.3
1,646,464	-				-0.7
1,646,464	-				-0.0
1,646,476	+				+0.4
1,646,476	+				+0.5
1,646,477	-				+0.7
1,646,498	+				+0.5
1,646,499	-				+1.3
1,646,499	-				+0.4
1,646,499	-				-0.2
1,646,513	+				-1.3
1,646,513	+				-0.1
1,646,513	+				-0.1
1,646,513	+				-0.9
1,646,513	+				+0.3
1,646,513	+				+0.3
1,646,513	+				+1.6
1,646,513	+				-0.3
1,646,513	+				+1.7
1,646,514	-				+2.1
1,646,514	-				-1.5
1,646,514	-				-1.2
1,646,514	-				+0.6
1,646,514	-				-1.7
1,646,518	+				-0.0
1,646,518	+				-1.6
1,646,518	+				+0.3
1,646,518	+				-1.0
1,646,518	+				-0.1
1,646,518	+				+0.2
1,646,518	+				+1.3
1,646,518	+				-0.6
1,646,519	-				+0.9
1,646,519	-				+0.7
1,646,519	-				+0.5
1,646,519	-				-0.1
1,646,519	-				+0.7
1,646,519	-				+0.3
1,646,519	-				+0.5
1,646,519	-				-1.0
1,646,566	+				-1.0
1,646,566	+				+1.3
1,646,566	+				+0.3
1,646,567	-				+0.4
1,646,567	-				+1.6
1,646,567	-				-0.2
1,646,578	+				+1.3
1,646,578	+				+0.8
1,646,578	+				-0.9
1,646,578	+				+2.3
1,646,578	+				+0.5
1,646,578	+				-0.3
1,646,578	+				+0.3
1,646,578	+				+0.7
1,646,579	-				+0.3
1,646,579	-				-1.0
1,646,579	-				-1.3
1,646,579	-				+2.0
1,646,579	-				+0.8
1,646,579	-				+1.0
1,646,579	-				-0.8
1,646,579	-				+0.1
1,646,579	-				+0.6
1,646,588	+				+1.1
1,646,588	+				+0.1
1,646,588	+				-0.9
1,646,588	+				-0.1
1,646,588	+				-1.2
1,646,588	+				+0.1
1,646,589	-				+0.5
1,646,690	+				+1.3
1,646,690	+				+1.3
1,646,690	+				-0.7
1,646,690	+				+0.4
1,646,691	-				-0.5
1,646,691	-				-0.9
1,646,720	+				-1.9
1,646,720	+				-0.4
1,646,720	+				-0.0
1,646,721	-				+0.8
1,646,721	-				+0.7
1,646,721	-				-1.7
1,646,721	-				-0.7
1,646,721	-				+1.3
1,646,742	+				-1.2
1,646,742	+				+0.3
1,646,742	+				-0.0
1,646,743	-				-1.3
1,646,743	-				+0.5
1,646,777	+		AO353_07485	0.10	+0.5
1,646,777	+		AO353_07485	0.10	-0.3
1,646,777	+		AO353_07485	0.10	-0.2
1,646,777	+		AO353_07485	0.10	+0.3
1,646,777	+		AO353_07485	0.10	-0.5
1,646,777	+		AO353_07485	0.10	-0.7
1,646,777	+		AO353_07485	0.10	-0.8
1,646,777	+		AO353_07485	0.10	+1.1
1,646,777	+		AO353_07485	0.10	-0.7
1,646,777	+		AO353_07485	0.10	-0.0
1,646,777	+		AO353_07485	0.10	-0.3
1,646,777	+		AO353_07485	0.10	+0.5
1,646,777	+		AO353_07485	0.10	-1.4
1,646,777	+		AO353_07485	0.10	+0.5
1,646,777	+		AO353_07485	0.10	-0.5
1,646,778	-		AO353_07485	0.10	+0.1
1,646,778	-		AO353_07485	0.10	+0.7
1,646,778	-		AO353_07485	0.10	-2.2
1,646,778	-		AO353_07485	0.10	-0.3
1,646,778	-		AO353_07485	0.10	+0.7
1,646,778	-		AO353_07485	0.10	-1.6
1,646,783	+		AO353_07485	0.11	+1.0
1,646,783	+		AO353_07485	0.11	+1.2
1,646,784	-		AO353_07485	0.11	-0.3
1,646,792	+		AO353_07485	0.11	+0.4
1,646,792	+		AO353_07485	0.11	+1.3
1,646,792	+		AO353_07485	0.11	-0.1
1,646,792	+		AO353_07485	0.11	-0.7
1,646,793	-		AO353_07485	0.11	+1.0
1,646,793	-		AO353_07485	0.11	-2.0
1,646,793	-		AO353_07485	0.11	+0.7
1,646,793	-		AO353_07485	0.11	+0.4
1,646,793	-		AO353_07485	0.11	-1.2
1,646,810	+		AO353_07485	0.12	-0.1
1,646,845	-		AO353_07485	0.14	-0.3
1,646,949	+		AO353_07485	0.20	-1.7
1,646,949	+		AO353_07485	0.20	-0.4
1,646,981	+		AO353_07485	0.22	-0.4
1,646,981	+		AO353_07485	0.22	-3.2
1,646,981	+		AO353_07485	0.22	-1.9
1,646,981	+		AO353_07485	0.22	+0.2
1,646,981	+		AO353_07485	0.22	-2.0
1,646,981	+		AO353_07485	0.22	-0.1
1,646,981	+		AO353_07485	0.22	-0.4
1,646,981	+		AO353_07485	0.22	-2.5
1,646,981	+		AO353_07485	0.22	+1.5
1,646,981	+		AO353_07485	0.22	-0.1
1,646,981	+		AO353_07485	0.22	+0.5
1,646,982	-		AO353_07485	0.22	+0.7
1,646,982	-		AO353_07485	0.22	+0.9
1,646,982	-		AO353_07485	0.22	-1.8
1,646,982	-		AO353_07485	0.22	+0.5
1,646,982	-		AO353_07485	0.22	+0.1
1,646,982	-		AO353_07485	0.22	-0.4
1,646,982	-		AO353_07485	0.22	-2.2
1,646,984	+		AO353_07485	0.22	+0.9
1,646,984	+				+1.3
1,646,984	+		AO353_07485	0.22	-0.3
1,646,985	-		AO353_07485	0.22	+1.3
1,646,985	-		AO353_07485	0.22	+0.6
1,646,985	-		AO353_07485	0.22	+1.1
1,647,053	+		AO353_07485	0.26	-1.3
1,647,053	+		AO353_07485	0.26	+1.6
1,647,053	+		AO353_07485	0.26	-0.1
1,647,054	-		AO353_07485	0.26	-1.7
1,647,054	-		AO353_07485	0.26	+0.3
1,647,054	-		AO353_07485	0.26	+0.3
1,647,110	+		AO353_07485	0.29	-0.3
1,647,110	+		AO353_07485	0.29	-0.3
1,647,111	-		AO353_07485	0.29	-1.3
1,647,111	-		AO353_07485	0.29	-1.7
1,647,275	+		AO353_07485	0.38	+1.1
1,647,275	+		AO353_07485	0.38	+0.5
1,647,275	+		AO353_07485	0.38	-0.7
1,647,275	+		AO353_07485	0.38	-1.0
1,647,275	+		AO353_07485	0.38	+1.3
1,647,275	+		AO353_07485	0.38	+0.1
1,647,275	+		AO353_07485	0.38	+0.7
1,647,276	-		AO353_07485	0.38	-0.7
1,647,276	-		AO353_07485	0.38	-0.4
1,647,276	-		AO353_07485	0.38	+0.3
1,647,276	-		AO353_07485	0.38	-0.5
1,647,276	-		AO353_07485	0.38	+0.5
1,647,276	-		AO353_07485	0.38	-0.8
1,647,276	-		AO353_07485	0.38	-0.0
1,647,276	-		AO353_07485	0.38	-0.7
1,647,334	+		AO353_07485	0.41	-0.7
1,647,334	+		AO353_07485	0.41	-0.9
1,647,334	+		AO353_07485	0.41	-1.3
1,647,334	+		AO353_07485	0.41	+1.3
1,647,334	+		AO353_07485	0.41	-0.9
1,647,335	-		AO353_07485	0.42	-3.4
1,647,335	-		AO353_07485	0.42	+0.3
1,647,335	-		AO353_07485	0.42	+2.3
1,647,335	-		AO353_07485	0.42	+3.6
1,647,335	-		AO353_07485	0.42	+0.9
1,647,335	-		AO353_07485	0.42	-0.7
1,647,335	-		AO353_07485	0.42	+1.9
1,647,335	-		AO353_07485	0.42	+0.5
1,647,335	-		AO353_07485	0.42	+0.3
1,647,335	-		AO353_07485	0.42	+0.2