Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04730

Experiment: Cholin acetate 38 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 38 mM
1,023,227	+		AO353_04725	0.20	+0.2
1,023,227	+		AO353_04725	0.20	+0.6
1,023,228	-		AO353_04725	0.21	+0.3
1,023,228	-		AO353_04725	0.21	-1.8
1,023,228	-		AO353_04725	0.21	+0.1
1,023,253	+		AO353_04725	0.23	-0.2
1,023,253	+		AO353_04725	0.23	-0.5
1,023,253	+		AO353_04725	0.23	-0.6
1,023,253	+		AO353_04725	0.23	-1.3
1,023,254	-		AO353_04725	0.23	-1.3
1,023,254	-		AO353_04725	0.23	-1.5
1,023,254	-		AO353_04725	0.23	+0.3
1,023,254	-		AO353_04725	0.23	-1.2
1,023,254	-		AO353_04725	0.23	+1.6
1,023,254	-		AO353_04725	0.23	-0.2
1,023,254	-		AO353_04725	0.23	+1.1
1,023,310	+		AO353_04725	0.28	+0.4
1,023,310	+		AO353_04725	0.28	+1.5
1,023,310	+		AO353_04725	0.28	-1.2
1,023,310	+		AO353_04725	0.28	-1.3
1,023,311	-		AO353_04725	0.28	-0.4
1,023,311	-		AO353_04725	0.28	+1.1
1,023,448	+		AO353_04725	0.39	+0.5
1,023,448	+		AO353_04725	0.39	+0.6
1,023,448	+		AO353_04725	0.39	+0.6
1,023,828	-		AO353_04725	0.72	+2.9
1,023,853	+		AO353_04725	0.74	+1.1
1,023,853	+		AO353_04725	0.74	-0.5
1,023,853	+		AO353_04725	0.74	-0.9
1,023,854	-		AO353_04725	0.74	-0.2
1,023,854	-		AO353_04725	0.74	-0.4
1,023,854	-		AO353_04725	0.74	-1.5
1,023,854	-		AO353_04725	0.74	-0.6
1,023,854	-		AO353_04725	0.74	-1.9
1,023,923	-		AO353_04725	0.80	+0.6
1,023,923	-		AO353_04725	0.80	-2.1
1,023,923	-		AO353_04725	0.80	+0.5
1,023,964	+		AO353_04725	0.83	-0.5
1,024,030	+		AO353_04725	0.89	+2.4
1,024,030	+		AO353_04725	0.89	+0.1
1,024,030	+		AO353_04725	0.89	-0.8
1,024,030	+		AO353_04725	0.89	-1.5
1,024,031	-		AO353_04725	0.89	+0.8
1,024,031	-		AO353_04725	0.89	-0.4
1,024,031	-		AO353_04725	0.89	+0.7
1,024,031	-		AO353_04725	0.89	-1.6
1,024,115	+				-0.8
1,024,115	+				-2.5
1,024,116	-				+0.7
1,024,116	-				+0.5
1,024,116	-				-1.3
1,024,116	-				-1.9
1,024,122	+				-0.3
1,024,168	+				+0.5
1,024,169	-				-2.6
1,024,169	-				+0.8
1,024,169	-				-0.1
1,024,175	+				+0.1
1,024,175	+				+0.6
1,024,175	+				-0.5
1,024,175	+				-0.4
1,024,176	-				+1.1
1,024,176	-				-1.8
1,024,187	+				+0.3
1,024,187	+				-1.8
1,024,187	+				-0.2
1,024,188	-				-1.1
1,024,225	+				+0.4
1,024,232	+				-2.9
1,024,278	+		AO353_04730	0.16	+0.3
1,024,279	-		AO353_04730	0.16	-1.6
1,024,321	-		AO353_04730	0.22	-1.9
1,024,321	-		AO353_04730	0.22	-0.9
1,024,321	-		AO353_04730	0.22	+0.3
1,024,321	-		AO353_04730	0.22	-0.9
1,024,321	-		AO353_04730	0.22	+1.1
1,024,321	-		AO353_04730	0.22	-1.4
1,024,321	-		AO353_04730	0.22	+0.1
1,024,331	+		AO353_04730	0.24	-2.3
1,024,425	+		AO353_04730	0.38	-1.8
1,024,426	-		AO353_04730	0.38	+1.1
1,024,479	+		AO353_04730	0.46	-0.9
1,024,479	+		AO353_04730	0.46	+1.1
1,024,480	-		AO353_04730	0.46	-0.7
1,024,482	+		AO353_04730	0.47	-0.9
1,024,482	+		AO353_04730	0.47	-0.8
1,024,482	+		AO353_04730	0.47	+0.9
1,024,482	+		AO353_04730	0.47	+0.3
1,024,482	+		AO353_04730	0.47	+1.1
1,024,482	+		AO353_04730	0.47	+0.5
1,024,483	-		AO353_04730	0.47	-0.2
1,024,483	-		AO353_04730	0.47	-0.2
1,024,483	-		AO353_04730	0.47	-0.2
1,024,483	-		AO353_04730	0.47	+1.1
1,024,483	-		AO353_04730	0.47	-1.3
1,024,483	-		AO353_04730	0.47	-1.3
1,024,483	-		AO353_04730	0.47	+0.3
1,024,483	-		AO353_04730	0.47	-1.2
1,024,764	+				-0.2
1,024,764	+				+0.4
1,024,764	+				+0.7
1,024,764	+				+0.3
1,024,764	+				-1.0
1,024,805	-				+0.2
1,024,861	+				-1.5
1,024,861	+				-0.9
1,024,862	-				-1.1
1,024,862	-				-0.8
1,024,862	-				+1.0
1,024,862	-				-0.5
1,024,862	-				+0.2
1,024,862	-				+0.2
1,024,862	-				-0.2
1,024,866	-				+1.1
1,024,882	+				+0.1
1,024,882	+				+0.6
1,024,882	+				+1.4
1,024,882	+				+0.2
1,024,883	-				+1.8
1,024,883	-				-1.1
1,024,883	-				+0.1
1,024,883	-				-0.8
1,024,883	-				-0.4
1,024,883	-				+1.1
1,024,883	-				-0.1
1,024,976	-				+1.1
1,024,976	-				-0.4
1,024,984	+				-0.4
1,024,984	+				+0.1
1,024,984	+				-0.1
1,024,985	-				+0.5
1,024,985	-				+2.1
1,024,985	-				+0.6
1,025,072	+				-0.1
1,025,072	+				+0.1
1,025,072	+				+2.6
1,025,072	+				-0.8
1,025,073	-				+0.9
1,025,073	-				-0.3
1,025,073	-				-0.9
1,025,073	-				+1.6
1,025,073	-				-1.5
1,025,109	-				-0.1
1,025,109	-				+0.1
1,025,132	+				-0.3
1,025,132	+				-1.8
1,025,133	-				+0.3
1,025,133	-				+0.5
1,025,479	+		AO353_04735	0.23	-1.9
1,025,479	+		AO353_04735	0.23	+0.3
1,025,479	+		AO353_04735	0.23	+2.4
1,025,479	+		AO353_04735	0.23	-1.9
1,025,479	+		AO353_04735	0.23	-2.1
1,025,522	+		AO353_04735	0.26	+0.3
1,025,595	+		AO353_04735	0.31	+0.6
1,025,596	-		AO353_04735	0.31	+0.1
1,025,596	-		AO353_04735	0.31	-1.3
1,025,596	-		AO353_04735	0.31	+0.1
1,025,597	+		AO353_04735	0.32	-0.9
1,025,597	+		AO353_04735	0.32	-1.3
1,025,597	+		AO353_04735	0.32	+1.4
1,025,597	+		AO353_04735	0.32	+0.1
1,025,598	-		AO353_04735	0.32	-0.5
1,025,598	-		AO353_04735	0.32	+0.3
1,025,707	-		AO353_04735	0.39	+1.1
1,025,784	+		AO353_04735	0.44	+0.6
1,025,784	+		AO353_04735	0.44	-0.3
1,025,784	+		AO353_04735	0.44	+0.6
1,025,784	+		AO353_04735	0.44	-0.0
1,025,784	+		AO353_04735	0.44	+0.7
1,025,784	+		AO353_04735	0.44	+0.1
1,025,784	+		AO353_04735	0.44	+0.4
1,025,784	+		AO353_04735	0.44	+0.5
1,025,784	+		AO353_04735	0.44	-0.5
1,025,785	-		AO353_04735	0.44	+1.1
1,025,785	-		AO353_04735	0.44	-0.4
1,025,785	-		AO353_04735	0.44	-0.0
1,025,785	-		AO353_04735	0.44	+0.2
1,025,785	-		AO353_04735	0.44	-1.6
1,025,785	-		AO353_04735	0.44	+0.9
1,025,785	-		AO353_04735	0.44	-0.8
1,025,813	+		AO353_04735	0.46	+0.6