Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3907
Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | A22 0.02 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 4,688,925 | - | Shewana3_3906 | 0.64 | -0.1 | |
| 4,688,929 | - | Shewana3_3906 | 0.64 | -0.2 | |
| 4,689,116 | + | Shewana3_3906 | 0.71 | +0.2 | |
| 4,689,116 | + | Shewana3_3906 | 0.71 | +0.1 | |
| 4,689,128 | + | Shewana3_3906 | 0.72 | -0.1 | |
| 4,689,136 | - | Shewana3_3906 | 0.72 | -1.5 | |
| 4,689,138 | + | Shewana3_3906 | 0.72 | -0.3 | |
| 4,689,307 | + | Shewana3_3906 | 0.78 | +0.2 | |
| 4,689,648 | + | -0.3 | |||
| 4,689,904 | - | -0.6 | |||
| 4,689,904 | - | -0.6 | |||
| 4,690,207 | - | Shewana3_3907 | 0.59 | -0.5 | |
| 4,690,261 | + | Shewana3_3907 | 0.69 | -0.5 | |
| 4,690,352 | - | Shewana3_3907 | 0.86 | -1.9 | |
| 4,690,508 | - | -1.1 | |||
| 4,690,508 | - | -0.9 | |||
| 4,690,615 | + | +1.1 | |||
| 4,691,166 | - | Shewana3_3908 | 0.50 | -1.6 |
Or see this region's nucleotide sequence