Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2921

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
3,498,189	+		Shewana3_2920	0.14	+0.2
3,498,200	-		Shewana3_2920	0.15	+0.6
3,498,344	-		Shewana3_2920	0.29	+0.6
3,498,344	-		Shewana3_2920	0.29	+0.6
3,498,344	-		Shewana3_2920	0.29	-0.4
3,498,355	-		Shewana3_2920	0.30	+0.1
3,498,359	-		Shewana3_2920	0.30	+0.6
3,498,455	+		Shewana3_2920	0.40	+0.6
3,498,464	+		Shewana3_2920	0.41	-0.1
3,498,472	-		Shewana3_2920	0.41	-0.4
3,498,472	-		Shewana3_2920	0.41	+0.6
3,498,481	-		Shewana3_2920	0.42	+1.2
3,498,517	-		Shewana3_2920	0.46	-0.4
3,498,542	+		Shewana3_2920	0.48	+0.1
3,498,555	+		Shewana3_2920	0.49	-0.6
3,498,555	+		Shewana3_2920	0.49	-1.7
3,498,619	+		Shewana3_2920	0.56	+0.1
3,498,622	-		Shewana3_2920	0.56	+0.6
3,498,772	+		Shewana3_2920	0.70	-0.1
3,498,772	+		Shewana3_2920	0.70	-0.7
3,498,832	-		Shewana3_2920	0.76	+0.6
3,498,832	-		Shewana3_2920	0.76	+0.6
3,498,844	-		Shewana3_2920	0.77	-1.2
3,498,844	-		Shewana3_2920	0.77	-1.5
3,498,846	+		Shewana3_2920	0.78	+0.6
3,498,846	+		Shewana3_2920	0.78	-0.3
3,498,854	+		Shewana3_2920	0.78	+0.6
3,498,868	-		Shewana3_2920	0.80	+0.6
3,498,903	-		Shewana3_2920	0.83	+0.6
3,498,922	-		Shewana3_2920	0.85	+0.6
3,498,929	+		Shewana3_2920	0.86	+0.8
3,498,929	+		Shewana3_2920	0.86	-0.6
3,498,938	-		Shewana3_2920	0.87	+0.6
3,498,947	+		Shewana3_2920	0.87	-0.7
3,499,011	+				-0.8
3,499,014	-				+0.6
3,499,017	+				-0.6
3,499,023	+				-0.0
3,499,139	+				+0.2
3,499,243	-		Shewana3_2921	0.15	+0.6
3,499,250	+		Shewana3_2921	0.16	+0.3
3,499,253	-		Shewana3_2921	0.17	+1.2
3,499,274	+		Shewana3_2921	0.22	+0.6
3,499,274	+		Shewana3_2921	0.22	+0.4
3,499,274	+		Shewana3_2921	0.22	+1.6
3,499,275	-		Shewana3_2921	0.22	-1.0
3,499,282	-		Shewana3_2921	0.23	+2.6
3,499,293	-		Shewana3_2921	0.26	+0.6
3,499,305	+		Shewana3_2921	0.28	-1.4
3,499,320	-		Shewana3_2921	0.32	-1.4
3,499,335	-		Shewana3_2921	0.35	-0.8
3,499,337	+		Shewana3_2921	0.36	+0.6
3,499,337	+		Shewana3_2921	0.36	+0.6
3,499,369	+		Shewana3_2921	0.43	+0.9
3,499,369	+		Shewana3_2921	0.43	+0.2
3,499,374	+		Shewana3_2921	0.44	-0.4
3,499,374	+		Shewana3_2921	0.44	-0.4
3,499,374	+		Shewana3_2921	0.44	-1.0
3,499,382	-		Shewana3_2921	0.45	-0.4
3,499,382	-		Shewana3_2921	0.45	+0.6
3,499,382	-		Shewana3_2921	0.45	-0.4
3,499,384	+		Shewana3_2921	0.46	+0.6
3,499,414	-		Shewana3_2921	0.53	-0.9
3,499,475	+		Shewana3_2921	0.66	+0.3
3,499,483	-		Shewana3_2921	0.68	-0.4
3,499,485	+		Shewana3_2921	0.68	+0.6
3,499,485	+		Shewana3_2921	0.68	-1.0
3,499,547	+		Shewana3_2921	0.82	+0.6
3,499,555	-		Shewana3_2921	0.84	+0.6
3,499,575	+		Shewana3_2921	0.88	-0.1
3,499,575	+		Shewana3_2921	0.88	-0.6
3,499,575	+		Shewana3_2921	0.88	+0.2
3,499,575	+		Shewana3_2921	0.88	-0.1
3,499,575	+		Shewana3_2921	0.88	-0.1
3,499,622	+				+0.6
3,499,630	-				+0.6
3,499,637	+				+0.6
3,499,645	-				-0.4
3,499,645	-				-0.4
3,499,645	-				+0.6
3,499,658	+				+0.6
3,499,666	+				-0.4
3,499,666	-				+0.6
3,499,666	-				+0.6
3,499,666	-				+0.6
3,499,671	-				-0.4
3,499,695	+				+0.6
3,499,750	-				+0.6
3,499,907	+				+0.6
3,499,910	+				+0.6
3,499,918	-				+0.6
3,499,999	-				+0.6
3,499,999	-				-0.4
3,500,001	+				+0.6
3,500,009	+				+0.6
3,500,018	+				-0.4
3,500,018	-				+0.6
3,500,058	-				+0.6
3,500,060	+				+0.2
3,500,060	-				+0.6
3,500,068	-				+0.0
3,500,133	-				+0.6
3,500,140	+				-0.4
3,500,141	-				+0.6
3,500,150	+				+2.2
3,500,159	-				+0.6
3,500,163	+				-0.4
3,500,173	+				+0.6
3,500,333	+				-0.0
3,500,339	-				+0.6
3,500,398	-				+0.6
3,500,456	+				+1.1
3,500,472	+				-0.7
3,500,489	+				-3.0
3,500,489	+				+0.0
3,500,495	-				+0.6
3,500,526	+				+0.4
3,500,545	+				+0.6
3,500,588	+				+0.4
3,500,615	+				+0.6
3,500,615	+				+0.3
3,500,615	+				+4.1
3,500,623	-				+0.0
3,500,623	-				-0.4