Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2226
Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,675,371 | - | Shewana3_2225 | 0.26 | +0.6 | |
2,675,459 | - | Shewana3_2225 | 0.34 | -1.0 | |
2,675,529 | - | Shewana3_2225 | 0.41 | -1.0 | |
2,676,260 | - | Shewana3_2226 | 0.12 | -1.7 | |
2,676,292 | + | Shewana3_2226 | 0.19 | -1.0 | |
2,676,405 | + | Shewana3_2226 | 0.45 | +0.6 | |
2,676,418 | - | Shewana3_2226 | 0.48 | -0.4 | |
2,676,450 | + | Shewana3_2226 | 0.56 | +0.6 | |
2,676,491 | - | Shewana3_2226 | 0.65 | -1.0 | |
2,676,612 | - | +1.4 | |||
2,677,065 | + | Shewana3_2227 | 0.18 | +0.6 | |
2,677,149 | + | Shewana3_2227 | 0.26 | -1.0 | |
2,677,199 | + | Shewana3_2227 | 0.31 | +0.6 | |
2,677,214 | - | Shewana3_2227 | 0.32 | +1.9 | |
2,677,245 | + | Shewana3_2227 | 0.35 | +0.6 | |
2,677,524 | + | Shewana3_2227 | 0.62 | +0.6 | |
2,677,524 | + | Shewana3_2227 | 0.62 | +0.6 |
Or see this region's nucleotide sequence