Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1867
Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,211,196 | - | -0.5 | |||
2,211,523 | + | Shewana3_1866 | 0.50 | -1.8 | |
2,211,569 | + | Shewana3_1866 | 0.55 | -0.5 | |
2,212,204 | - | Shewana3_1867 | 0.23 | +1.1 | |
2,212,209 | + | Shewana3_1867 | 0.25 | -0.5 | |
2,212,494 | - | +1.1 | |||
2,212,520 | - | +1.1 | |||
2,212,649 | - | Shewana3_1868 | 0.17 | -0.8 | |
2,212,717 | + | Shewana3_1868 | 0.24 | +0.5 | |
2,212,721 | - | Shewana3_1868 | 0.24 | +1.3 | |
2,213,172 | - | Shewana3_1868 | 0.68 | +0.5 | |
2,213,334 | + | Shewana3_1868 | 0.84 | +0.5 | |
2,213,382 | + | Shewana3_1868 | 0.89 | +0.5 | |
2,213,448 | + | +0.5 |
Or see this region's nucleotide sequence