Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0745 and Shewana3_0746 are separated by 157 nucleotides Shewana3_0746 and Shewana3_0747 are separated by 3 nucleotides
Shewana3_0745: Shewana3_0745 - putative iron-sulfur cluster binding protein (RefSeq), at 864,279 to 865,460
_0745
Shewana3_0746: Shewana3_0746 - extracellular solute-binding protein (RefSeq), at 865,618 to 866,445
_0746
Shewana3_0747: Shewana3_0747 - diguanylate cyclase (RefSeq), at 866,449 to 868,389
_0747
Position (kb) 865
866
867 Strain fitness (log2 ratio) -1
0
1
2
3 at 864.786 kb on - strand, within Shewana3_0745 at 864.820 kb on - strand, within Shewana3_0745 at 864.951 kb on + strand, within Shewana3_0745 at 865.149 kb on + strand, within Shewana3_0745 at 865.157 kb on - strand, within Shewana3_0745 at 865.157 kb on - strand, within Shewana3_0745 at 865.392 kb on - strand at 865.510 kb on - strand at 865.530 kb on - strand at 865.629 kb on + strand at 865.655 kb on - strand at 865.672 kb on + strand at 865.672 kb on + strand at 865.672 kb on + strand at 865.763 kb on - strand, within Shewana3_0746 at 865.780 kb on - strand, within Shewana3_0746 at 865.785 kb on - strand, within Shewana3_0746 at 865.813 kb on - strand, within Shewana3_0746 at 865.878 kb on + strand, within Shewana3_0746 at 865.886 kb on - strand, within Shewana3_0746 at 865.919 kb on - strand, within Shewana3_0746 at 866.325 kb on - strand, within Shewana3_0746 at 866.690 kb on + strand, within Shewana3_0747 at 866.767 kb on + strand, within Shewana3_0747 at 866.767 kb on + strand, within Shewana3_0747 at 866.775 kb on - strand, within Shewana3_0747 at 866.779 kb on + strand, within Shewana3_0747 at 866.966 kb on - strand, within Shewana3_0747 at 867.015 kb on - strand, within Shewana3_0747 at 867.196 kb on + strand, within Shewana3_0747 at 867.429 kb on - strand, within Shewana3_0747
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.02 mg/ml remove 864,786 - Shewana3_0745 0.43 +0.1 864,820 - Shewana3_0745 0.46 -0.7 864,951 + Shewana3_0745 0.57 -0.3 865,149 + Shewana3_0745 0.74 +0.6 865,157 - Shewana3_0745 0.74 +1.5 865,157 - Shewana3_0745 0.74 -0.7 865,392 - +0.2 865,510 - +0.9 865,530 - -0.3 865,629 + -1.4 865,655 - +0.9 865,672 + +0.5 865,672 + -0.4 865,672 + -0.4 865,763 - Shewana3_0746 0.18 +3.2 865,780 - Shewana3_0746 0.20 +0.4 865,785 - Shewana3_0746 0.20 +0.2 865,813 - Shewana3_0746 0.24 +0.9 865,878 + Shewana3_0746 0.31 +0.9 865,886 - Shewana3_0746 0.32 -0.7 865,919 - Shewana3_0746 0.36 +2.5 866,325 - Shewana3_0746 0.85 -0.4 866,690 + Shewana3_0747 0.12 +0.9 866,767 + Shewana3_0747 0.16 -0.1 866,767 + Shewana3_0747 0.16 -1.4 866,775 - Shewana3_0747 0.17 +0.2 866,779 + Shewana3_0747 0.17 +0.9 866,966 - Shewana3_0747 0.27 +0.9 867,015 - Shewana3_0747 0.29 +0.9 867,196 + Shewana3_0747 0.38 -0.7 867,429 - Shewana3_0747 0.50 -0.8
Or see this region's nucleotide sequence