Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_2034 and Pf1N1B4_2035 are separated by 234 nucleotides Pf1N1B4_2035 and Pf1N1B4_2036 are separated by 15 nucleotides
Pf1N1B4_2034 - Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1), at 2,320,811 to 2,321,809
_2034
Pf1N1B4_2035 - Phosphate transport system permease protein PstC (TC 3.A.1.7.1), at 2,322,044 to 2,324,332
_2035
Pf1N1B4_2036 - Phosphate transport system permease protein PstA (TC 3.A.1.7.1), at 2,324,348 to 2,326,018
_2036
Position (kb)
2322
2323
2324
2325 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2321.726 kb on + strand at 2321.726 kb on + strand at 2321.727 kb on - strand at 2321.796 kb on + strand at 2321.796 kb on + strand at 2321.796 kb on + strand at 2321.796 kb on + strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.797 kb on - strand at 2321.799 kb on + strand at 2321.799 kb on + strand at 2321.799 kb on + strand at 2321.799 kb on + strand at 2321.815 kb on + strand at 2321.897 kb on + strand at 2321.897 kb on + strand at 2321.897 kb on + strand at 2321.897 kb on + strand at 2321.897 kb on + strand at 2321.898 kb on - strand at 2321.898 kb on - strand at 2321.898 kb on - strand at 2321.898 kb on - strand at 2321.929 kb on - strand at 2322.027 kb on + strand at 2322.027 kb on + strand at 2322.110 kb on - strand at 2322.590 kb on + strand, within Pf1N1B4_2035 at 2322.839 kb on + strand, within Pf1N1B4_2035 at 2323.343 kb on + strand, within Pf1N1B4_2035 at 2323.344 kb on - strand, within Pf1N1B4_2035 at 2323.358 kb on + strand, within Pf1N1B4_2035 at 2323.358 kb on + strand, within Pf1N1B4_2035 at 2323.448 kb on + strand, within Pf1N1B4_2035 at 2323.502 kb on + strand, within Pf1N1B4_2035 at 2323.503 kb on - strand, within Pf1N1B4_2035 at 2323.610 kb on + strand, within Pf1N1B4_2035 at 2323.787 kb on + strand, within Pf1N1B4_2035 at 2323.787 kb on + strand, within Pf1N1B4_2035 at 2323.799 kb on + strand, within Pf1N1B4_2035 at 2323.865 kb on + strand, within Pf1N1B4_2035 at 2323.865 kb on + strand, within Pf1N1B4_2035 at 2323.865 kb on + strand, within Pf1N1B4_2035 at 2323.865 kb on + strand, within Pf1N1B4_2035 at 2323.866 kb on - strand, within Pf1N1B4_2035 at 2323.928 kb on + strand, within Pf1N1B4_2035 at 2323.929 kb on - strand, within Pf1N1B4_2035 at 2323.929 kb on - strand, within Pf1N1B4_2035 at 2324.318 kb on + strand at 2324.330 kb on + strand at 2324.339 kb on + strand at 2324.339 kb on + strand at 2324.339 kb on + strand at 2324.339 kb on + strand at 2324.339 kb on + strand at 2324.339 kb on + strand at 2325.194 kb on + strand, within Pf1N1B4_2036 at 2325.195 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 2,321,726 + -0.1 2,321,726 + +1.2 2,321,727 - -0.0 2,321,796 + -0.1 2,321,796 + -1.1 2,321,796 + +0.4 2,321,796 + +0.6 2,321,797 - +0.4 2,321,797 - +0.4 2,321,797 - +1.4 2,321,797 - +0.4 2,321,797 - +0.4 2,321,797 - -0.6 2,321,797 - -0.7 2,321,797 - +0.8 2,321,799 + -0.4 2,321,799 + -0.1 2,321,799 + -1.6 2,321,799 + -2.8 2,321,815 + -0.0 2,321,897 + -1.1 2,321,897 + -1.1 2,321,897 + -0.8 2,321,897 + +0.4 2,321,897 + -1.1 2,321,898 - -0.8 2,321,898 - -1.1 2,321,898 - +1.7 2,321,898 - -1.1 2,321,929 - +0.0 2,322,027 + -0.6 2,322,027 + +1.4 2,322,110 - -1.0 2,322,590 + Pf1N1B4_2035 0.24 -1.4 2,322,839 + Pf1N1B4_2035 0.35 -1.6 2,323,343 + Pf1N1B4_2035 0.57 +0.4 2,323,344 - Pf1N1B4_2035 0.57 -0.6 2,323,358 + Pf1N1B4_2035 0.57 -0.1 2,323,358 + Pf1N1B4_2035 0.57 -1.1 2,323,448 + Pf1N1B4_2035 0.61 -0.8 2,323,502 + Pf1N1B4_2035 0.64 -0.6 2,323,503 - Pf1N1B4_2035 0.64 -0.9 2,323,610 + Pf1N1B4_2035 0.68 -0.6 2,323,787 + Pf1N1B4_2035 0.76 -1.0 2,323,787 + Pf1N1B4_2035 0.76 -0.1 2,323,799 + Pf1N1B4_2035 0.77 -0.6 2,323,865 + Pf1N1B4_2035 0.80 -0.1 2,323,865 + Pf1N1B4_2035 0.80 -1.4 2,323,865 + Pf1N1B4_2035 0.80 +0.4 2,323,865 + Pf1N1B4_2035 0.80 +0.2 2,323,866 - Pf1N1B4_2035 0.80 +1.4 2,323,928 + Pf1N1B4_2035 0.82 -1.1 2,323,929 - Pf1N1B4_2035 0.82 -1.8 2,323,929 - Pf1N1B4_2035 0.82 +1.0 2,324,318 + +1.4 2,324,330 + -0.9 2,324,339 + +0.8 2,324,339 + -0.6 2,324,339 + -0.6 2,324,339 + -2.1 2,324,339 + -0.7 2,324,339 + +0.0 2,325,194 + Pf1N1B4_2036 0.51 -0.9 2,325,195 - -1.1
Or see this region's nucleotide sequence