Experiment: LB, pH10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2700 and Ac3H11_2701 are separated by 481 nucleotides Ac3H11_2701 and Ac3H11_2702 are separated by 78 nucleotides Ac3H11_2702 and Ac3H11_2703 overlap by 22 nucleotides
Ac3H11_2700 - FIG00575888: hypothetical protein, at 996,459 to 997,400
_2700
Ac3H11_2701 - FIG002188: hypothetical protein, at 997,882 to 998,817
_2701
Ac3H11_2702 - hypothetical protein, at 998,896 to 999,321
_2702
Ac3H11_2703 - Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein, at 999,300 to 1,000,028
_2703
Position (kb) 997
998
999 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 996.960 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.015 kb on + strand, within Ac3H11_2700 at 997.312 kb on + strand at 997.313 kb on - strand at 997.327 kb on - strand at 997.509 kb on + strand at 997.510 kb on - strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.638 kb on - strand at 997.638 kb on - strand at 997.680 kb on + strand at 997.680 kb on + strand at 997.861 kb on + strand at 997.861 kb on + strand at 997.862 kb on - strand at 997.878 kb on + strand at 997.878 kb on + strand at 997.878 kb on + strand at 997.879 kb on - strand at 997.883 kb on + strand at 997.883 kb on + strand at 997.884 kb on - strand at 997.907 kb on - strand at 997.992 kb on - strand, within Ac3H11_2701 at 998.013 kb on - strand, within Ac3H11_2701 at 998.013 kb on - strand, within Ac3H11_2701 at 998.052 kb on - strand, within Ac3H11_2701 at 998.052 kb on - strand, within Ac3H11_2701 at 998.052 kb on - strand, within Ac3H11_2701 at 998.150 kb on + strand, within Ac3H11_2701 at 998.150 kb on + strand, within Ac3H11_2701 at 998.165 kb on + strand, within Ac3H11_2701 at 998.165 kb on + strand, within Ac3H11_2701 at 998.288 kb on + strand, within Ac3H11_2701 at 998.289 kb on - strand, within Ac3H11_2701 at 998.289 kb on - strand, within Ac3H11_2701 at 998.300 kb on + strand, within Ac3H11_2701 at 998.301 kb on - strand, within Ac3H11_2701 at 998.309 kb on + strand, within Ac3H11_2701 at 998.390 kb on + strand, within Ac3H11_2701 at 998.390 kb on + strand, within Ac3H11_2701 at 998.391 kb on - strand, within Ac3H11_2701 at 998.472 kb on + strand, within Ac3H11_2701 at 998.472 kb on + strand, within Ac3H11_2701 at 998.473 kb on - strand, within Ac3H11_2701 at 998.473 kb on - strand, within Ac3H11_2701 at 998.474 kb on + strand, within Ac3H11_2701 at 998.474 kb on + strand, within Ac3H11_2701 at 998.474 kb on + strand, within Ac3H11_2701 at 998.539 kb on + strand, within Ac3H11_2701 at 998.540 kb on - strand, within Ac3H11_2701 at 998.540 kb on - strand, within Ac3H11_2701 at 998.618 kb on + strand, within Ac3H11_2701 at 998.619 kb on - strand, within Ac3H11_2701 at 998.637 kb on - strand, within Ac3H11_2701 at 998.658 kb on + strand, within Ac3H11_2701 at 998.658 kb on + strand, within Ac3H11_2701 at 998.729 kb on + strand at 998.887 kb on + strand at 998.887 kb on + strand at 998.918 kb on + strand at 998.918 kb on + strand at 998.918 kb on + strand at 998.919 kb on - strand at 998.919 kb on - strand at 998.921 kb on + strand at 998.922 kb on - strand at 998.922 kb on - strand at 998.922 kb on - strand at 999.006 kb on - strand, within Ac3H11_2702 at 999.229 kb on + strand, within Ac3H11_2702 at 999.230 kb on - strand, within Ac3H11_2702 at 999.230 kb on - strand, within Ac3H11_2702 at 999.231 kb on + strand, within Ac3H11_2702 at 999.231 kb on + strand, within Ac3H11_2702 at 999.285 kb on + strand at 999.285 kb on + strand at 999.286 kb on - strand at 999.286 kb on - strand at 999.286 kb on - strand at 999.286 kb on - strand at 999.286 kb on - strand at 999.319 kb on + strand at 999.474 kb on + strand, within Ac3H11_2703 at 999.496 kb on + strand, within Ac3H11_2703 at 999.497 kb on - strand, within Ac3H11_2703 at 999.497 kb on - strand, within Ac3H11_2703 at 999.497 kb on - strand, within Ac3H11_2703 at 999.497 kb on - strand, within Ac3H11_2703 at 999.538 kb on + strand, within Ac3H11_2703 at 999.646 kb on - strand, within Ac3H11_2703
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH10 remove 996,960 + Ac3H11_2700 0.53 +1.7 997,012 + Ac3H11_2700 0.59 -0.3 997,012 + Ac3H11_2700 0.59 -2.7 997,012 + Ac3H11_2700 0.59 -1.0 997,012 + Ac3H11_2700 0.59 -1.2 997,013 - Ac3H11_2700 0.59 -1.9 997,013 - Ac3H11_2700 0.59 -0.5 997,013 - Ac3H11_2700 0.59 +1.3 997,013 - Ac3H11_2700 0.59 +1.4 997,015 + Ac3H11_2700 0.59 -0.2 997,312 + -0.4 997,313 - +0.7 997,327 - +1.2 997,509 + +2.4 997,510 - +0.4 997,637 + -0.8 997,637 + +1.3 997,637 + +0.0 997,637 + +1.9 997,637 + +0.8 997,637 + +1.1 997,638 - -0.8 997,638 - -0.9 997,680 + +2.4 997,680 + +1.0 997,861 + +1.1 997,861 + -1.9 997,862 - -0.3 997,878 + +0.1 997,878 + -1.3 997,878 + -0.6 997,879 - -2.0 997,883 + +0.5 997,883 + +0.6 997,884 - -2.5 997,907 - -0.5 997,992 - Ac3H11_2701 0.12 -1.7 998,013 - Ac3H11_2701 0.14 -1.7 998,013 - Ac3H11_2701 0.14 -1.3 998,052 - Ac3H11_2701 0.18 -1.7 998,052 - Ac3H11_2701 0.18 +1.0 998,052 - Ac3H11_2701 0.18 +0.4 998,150 + Ac3H11_2701 0.29 -0.6 998,150 + Ac3H11_2701 0.29 -1.6 998,165 + Ac3H11_2701 0.30 -2.8 998,165 + Ac3H11_2701 0.30 -0.2 998,288 + Ac3H11_2701 0.43 -0.5 998,289 - Ac3H11_2701 0.43 -0.9 998,289 - Ac3H11_2701 0.43 -0.1 998,300 + Ac3H11_2701 0.45 +1.3 998,301 - Ac3H11_2701 0.45 +1.5 998,309 + Ac3H11_2701 0.46 -1.5 998,390 + Ac3H11_2701 0.54 -1.2 998,390 + Ac3H11_2701 0.54 +0.2 998,391 - Ac3H11_2701 0.54 -0.9 998,472 + Ac3H11_2701 0.63 -1.8 998,472 + Ac3H11_2701 0.63 +2.2 998,473 - Ac3H11_2701 0.63 +0.3 998,473 - Ac3H11_2701 0.63 +0.1 998,474 + Ac3H11_2701 0.63 +1.4 998,474 + Ac3H11_2701 0.63 +1.8 998,474 + Ac3H11_2701 0.63 +1.7 998,539 + Ac3H11_2701 0.70 -1.4 998,540 - Ac3H11_2701 0.70 +2.0 998,540 - Ac3H11_2701 0.70 +1.7 998,618 + Ac3H11_2701 0.79 +0.5 998,619 - Ac3H11_2701 0.79 +1.8 998,637 - Ac3H11_2701 0.81 +1.9 998,658 + Ac3H11_2701 0.83 +0.1 998,658 + Ac3H11_2701 0.83 +1.5 998,729 + +1.9 998,887 + -0.2 998,887 + -0.7 998,918 + -0.0 998,918 + +1.5 998,918 + +1.2 998,919 - +1.6 998,919 - +1.0 998,921 + -0.2 998,922 - +0.2 998,922 - -0.8 998,922 - +0.3 999,006 - Ac3H11_2702 0.26 -0.4 999,229 + Ac3H11_2702 0.78 -2.2 999,230 - Ac3H11_2702 0.78 -1.3 999,230 - Ac3H11_2702 0.78 -0.5 999,231 + Ac3H11_2702 0.79 +0.2 999,231 + Ac3H11_2702 0.79 +0.4 999,285 + +0.4 999,285 + +0.5 999,286 - +0.6 999,286 - -0.4 999,286 - +0.8 999,286 - -2.9 999,286 - +0.6 999,319 + -1.8 999,474 + Ac3H11_2703 0.24 +0.0 999,496 + Ac3H11_2703 0.27 +3.0 999,497 - Ac3H11_2703 0.27 -1.8 999,497 - Ac3H11_2703 0.27 -0.2 999,497 - Ac3H11_2703 0.27 -1.2 999,497 - Ac3H11_2703 0.27 +1.3 999,538 + Ac3H11_2703 0.33 +0.2 999,646 - Ac3H11_2703 0.47 -0.5
Or see this region's nucleotide sequence