Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17780

Experiment: Cholin acetate 19 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 19 mM
3,916,606	+		AO353_17775	0.19	+1.8
3,916,606	+		AO353_17775	0.19	-1.3
3,916,606	+		AO353_17775	0.19	-0.4
3,916,606	+		AO353_17775	0.19	+0.3
3,916,607	-		AO353_17775	0.19	+3.0
3,916,607	-		AO353_17775	0.19	+1.0
3,916,609	+		AO353_17775	0.19	+1.4
3,916,609	+		AO353_17775	0.19	-0.0
3,916,609	+		AO353_17775	0.19	+0.3
3,916,609	+		AO353_17775	0.19	-0.3
3,916,610	-		AO353_17775	0.20	-2.7
3,916,610	-		AO353_17775	0.20	+1.3
3,916,690	+		AO353_17775	0.33	+1.7
3,916,691	-		AO353_17775	0.33	+1.0
3,916,735	+		AO353_17775	0.40	-1.2
3,916,735	+		AO353_17775	0.40	+0.4
3,916,736	-		AO353_17775	0.40	-0.3
3,916,736	-		AO353_17775	0.40	-1.1
3,916,736	-		AO353_17775	0.40	-1.6
3,916,748	+		AO353_17775	0.42	-0.3
3,916,748	+		AO353_17775	0.42	+0.1
3,916,749	-		AO353_17775	0.42	+1.3
3,916,749	-		AO353_17775	0.42	+0.2
3,916,898	-		AO353_17775	0.67	-0.0
3,916,911	+		AO353_17775	0.69	-0.2
3,916,912	-		AO353_17775	0.69	-1.0
3,916,912	-		AO353_17775	0.69	+0.4
3,916,974	+		AO353_17775	0.79	+0.6
3,916,975	-		AO353_17775	0.79	+1.6
3,917,029	+		AO353_17775	0.88	+0.5
3,917,085	+				-0.8
3,917,160	+				-1.8
3,917,161	-				-1.0
3,917,204	+				-0.8
3,917,205	-				-0.6
3,917,315	+				+0.8
3,917,341	+				+0.7
3,917,342	-				+1.9
3,917,398	+				-0.3
3,917,398	+				-1.2
3,917,399	-				+0.6
3,917,399	-				+1.0
3,917,424	-				+1.6
3,917,446	+				-0.8
3,917,455	+				-0.3
3,917,455	+				+1.3
3,917,460	-				+3.3
3,917,520	+				+0.0
3,917,544	-				+1.0
3,917,544	-				-2.0
3,917,544	-				+0.2
3,917,644	+				-1.1
3,917,645	-				+2.2
3,917,645	-				+0.2
3,917,645	-				-0.0
3,917,681	+				-1.3
3,917,681	+				+2.0
3,917,681	+				+1.1
3,917,681	+				-1.0
3,917,681	+				-0.3
3,917,681	+				+1.0
3,917,682	-				-0.1
3,917,682	-				+0.2
3,917,682	-				+1.0
3,917,682	-				+0.2
3,917,682	-				+0.2
3,917,682	-				+0.7
3,917,682	-				-0.3
3,917,683	+				-1.1
3,917,683	+				-0.1
3,917,683	+				-0.0
3,917,683	+				+0.7
3,917,683	+				-0.4
3,917,683	+				-1.0
3,917,683	+				-2.0
3,917,683	+				-0.7
3,917,683	+				+1.6
3,917,683	+				+1.2
3,917,683	+				-0.0
3,917,683	+				+1.0
3,917,683	+				+0.4
3,917,683	+				-0.6
3,917,683	+				+1.0
3,917,683	+				+1.7
3,917,683	+				+0.6
3,917,683	+				+0.1
3,917,683	+				-0.6
3,917,683	+				-0.0
3,917,684	-				+1.0
3,917,684	-				+0.8
3,917,684	-				+0.6
3,917,684	-				+0.7
3,917,684	-				-0.2
3,917,778	+		AO353_17780	0.19	-1.3
3,917,778	+		AO353_17780	0.19	-2.0
3,917,779	-		AO353_17780	0.19	+0.7
3,917,864	+		AO353_17780	0.29	+0.0
3,917,865	-		AO353_17780	0.29	+0.5
3,917,881	+		AO353_17780	0.30	+0.6
3,917,969	+		AO353_17780	0.40	+1.4
3,917,970	-		AO353_17780	0.40	+1.2
3,917,970	-		AO353_17780	0.40	-0.4
3,918,008	+		AO353_17780	0.44	+0.1
3,918,009	-		AO353_17780	0.44	+0.2
3,918,052	+		AO353_17780	0.49	-2.6
3,918,052	+		AO353_17780	0.49	+0.1
3,918,052	+		AO353_17780	0.49	+1.1
3,918,052	+		AO353_17780	0.49	+0.2
3,918,052	+		AO353_17780	0.49	+1.0
3,918,068	+		AO353_17780	0.51	+0.2
3,918,068	+		AO353_17780	0.51	+1.0
3,918,068	+		AO353_17780	0.51	-2.5
3,918,068	+		AO353_17780	0.51	-0.3
3,918,068	+		AO353_17780	0.51	-1.0
3,918,068	+		AO353_17780	0.51	-0.0
3,918,068	+		AO353_17780	0.51	-0.3
3,918,069	-		AO353_17780	0.51	+0.7
3,918,069	-		AO353_17780	0.51	+0.3
3,918,069	-		AO353_17780	0.51	+2.4
3,918,069	-		AO353_17780	0.51	+1.0
3,918,069	-		AO353_17780	0.51	-0.9
3,918,069	-		AO353_17780	0.51	-2.2
3,918,070	+		AO353_17780	0.51	+1.5
3,918,070	+		AO353_17780	0.51	+1.0
3,918,070	+		AO353_17780	0.51	+0.6
3,918,070	+		AO353_17780	0.51	-1.8
3,918,070	+		AO353_17780	0.51	+0.6
3,918,070	+		AO353_17780	0.51	+0.7
3,918,070	+		AO353_17780	0.51	-0.8
3,918,070	+		AO353_17780	0.51	+0.2
3,918,070	+		AO353_17780	0.51	+0.8
3,918,071	-		AO353_17780	0.51	+0.8
3,918,071	-		AO353_17780	0.51	+1.0
3,918,071	-		AO353_17780	0.51	+0.7
3,918,071	-		AO353_17780	0.51	+0.2
3,918,071	-		AO353_17780	0.51	-0.3
3,918,071	-		AO353_17780	0.51	+0.5
3,918,071	-		AO353_17780	0.51	+0.5
3,918,173	+		AO353_17780	0.62	+0.1
3,918,256	-		AO353_17780	0.71	-1.2
3,918,363	+		AO353_17780	0.83	+0.4
3,918,401	+		AO353_17780	0.87	+0.4
3,918,401	+		AO353_17780	0.87	+0.9
3,918,401	+		AO353_17780	0.87	-0.3
3,918,401	+		AO353_17780	0.87	-1.0
3,918,401	+		AO353_17780	0.87	+1.7
3,918,401	+		AO353_17780	0.87	+0.6
3,918,401	+		AO353_17780	0.87	+0.4
3,918,401	+		AO353_17780	0.87	+0.3
3,918,401	+		AO353_17780	0.87	+1.0
3,918,401	+		AO353_17780	0.87	+0.4
3,918,401	+		AO353_17780	0.87	+0.3
3,918,401	+		AO353_17780	0.87	+2.6
3,918,401	+		AO353_17780	0.87	+1.0
3,918,401	+		AO353_17780	0.87	+0.4
3,918,401	+		AO353_17780	0.87	+0.5
3,918,401	+		AO353_17780	0.87	-1.3
3,918,401	+		AO353_17780	0.87	-0.2
3,918,401	+		AO353_17780	0.87	+1.0
3,918,401	+		AO353_17780	0.87	-0.3
3,918,401	+		AO353_17780	0.87	+0.4
3,918,402	-		AO353_17780	0.87	+2.2
3,918,402	-		AO353_17780	0.87	-0.7
3,918,402	-		AO353_17780	0.87	-0.8
3,918,402	-		AO353_17780	0.87	+0.5
3,918,402	-		AO353_17780	0.87	-0.3
3,918,402	-		AO353_17780	0.87	-0.5
3,918,402	-		AO353_17780	0.87	+0.4
3,918,402	-		AO353_17780	0.87	-0.0
3,918,402	-		AO353_17780	0.87	+0.3
3,918,402	-				-1.3
3,918,402	-		AO353_17780	0.87	-0.6
3,918,402	-		AO353_17780	0.87	+0.8
3,918,403	+		AO353_17780	0.87	+1.7
3,918,422	+		AO353_17780	0.89	+0.4
3,918,422	+		AO353_17780	0.89	+0.9
3,918,422	+		AO353_17780	0.89	+1.1
3,918,422	+		AO353_17780	0.89	-0.8
3,918,422	+		AO353_17780	0.89	-0.3
3,918,423	-		AO353_17780	0.89	-0.3
3,918,423	-		AO353_17780	0.89	-1.3
3,918,423	-		AO353_17780	0.89	+0.8
3,918,484	+				-0.1
3,918,484	+				+1.6
3,918,484	+				-0.0
3,918,484	+				-1.6
3,918,484	+				+3.0
3,918,485	-				+1.3
3,918,485	-				+1.6
3,918,485	-				-0.0
3,918,485	-				+0.2
3,918,556	+				-1.1
3,918,557	-				-1.2
3,918,637	+				-0.9
3,918,637	+				+2.3
3,918,637	+				-0.0
3,918,637	+				+1.0
3,918,637	+				+0.4
3,918,637	+				+1.3
3,918,637	+				-0.0
3,918,638	-				+0.8
3,918,638	-				-0.6
3,918,638	-				-0.0
3,918,638	-				+1.5
3,918,638	-				-0.8
3,918,638	-				-0.3
3,918,639	+				-1.6
3,918,639	+				-0.3
3,918,639	+				-0.2
3,918,639	+				-0.3
3,918,639	+				+0.1
3,918,640	-				+0.8
3,918,640	-				-0.0
3,918,640	-				-0.6
3,918,640	-				+0.9
3,918,640	-				-0.5
3,918,655	+				+0.8
3,918,655	+				-0.6
3,918,655	+				-1.0
3,918,656	-				+0.8
3,918,679	+				-1.6
3,918,679	+				+0.0
3,918,679	+				+0.6
3,918,679	+				-1.5
3,918,679	+				+0.7
3,918,680	-				+0.4
3,918,680	-				-0.6
3,918,680	-				+0.1
3,918,685	+				+1.4
3,918,685	+				+1.3
3,918,686	-				+0.6
3,918,730	+				-1.9
3,918,730	+				-0.8
3,918,730	+				+1.4
3,918,731	-				+0.7
3,918,731	-				-1.7
3,918,731	-				+0.5
3,918,731	-				+1.1
3,918,770	+				-0.4
3,918,771	-				+2.0
3,918,781	+				-0.6
3,918,865	+				+0.3
3,918,874	+				+0.1
3,918,874	+				+1.0
3,918,874	+				-0.3
3,918,875	-				-1.0
3,918,875	-				+0.6
3,918,875	-				+0.0
3,918,918	-				-0.6
3,918,918	-				+1.3
3,918,959	+				+0.1
3,918,960	-				+2.1
3,918,960	-				-0.2
3,918,979	+				+0.6
3,918,979	+				-1.8
3,918,979	+				+1.7
3,918,979	+				-1.1
3,918,980	-				-1.3
3,918,995	+				-0.8
3,918,995	+				-0.0
3,918,995	+				-1.3
3,919,015	+				+0.7
3,919,015	+				-0.0
3,919,016	-				-1.0
3,919,016	-				+0.4
3,919,075	+				-0.0
3,919,075	+				+0.6
3,919,075	+				-0.5
3,919,075	+				-0.6
3,919,075	+				-0.2
3,919,075	+				+1.7
3,919,075	+				-1.6
3,919,075	+				-0.6
3,919,076	-				-1.3
3,919,076	-				+1.0
3,919,076	-				+0.2
3,919,076	-				+1.6
3,919,076	-				-0.4
3,919,076	-				-0.0
3,919,076	-				+0.6
3,919,087	+				-0.0
3,919,087	+				-1.6
3,919,088	-				+1.0
3,919,088	-				+0.5
3,919,183	+		AO353_17785	0.58	+1.1
3,919,183	+		AO353_17785	0.58	-1.0
3,919,183	+		AO353_17785	0.58	-0.1
3,919,184	-		AO353_17785	0.58	+0.4
3,919,184	-		AO353_17785	0.58	+3.0
3,919,184	-		AO353_17785	0.58	+0.6
3,919,261	+				-1.0
3,919,261	+				-1.6
3,919,261	+				-2.0
3,919,261	+				-0.0
3,919,261	+				-0.1
3,919,261	+				-2.5
3,919,261	+				+1.4
3,919,261	+				-0.2
3,919,261	+				+1.0
3,919,261	+				-2.9
3,919,261	+				+1.0
3,919,262	-				+1.0
3,919,262	-				-0.6
3,919,262	-				-2.2
3,919,268	+				+0.3
3,919,268	+				+0.6
3,919,268	+				-0.5
3,919,268	+				+1.3
3,919,269	-				+0.3
3,919,269	-				-0.2
3,919,269	-				-0.9
3,919,302	+				+0.2
3,919,302	+				-0.6
3,919,302	+				+0.1
3,919,302	+				+1.7
3,919,303	-				-0.6
3,919,303	-				-0.4
3,919,303	-				+0.7
3,919,303	-				+0.1
3,919,303	-				-0.9
3,919,372	+				-2.0
3,919,372	+				+3.0
3,919,431	+				-0.4
3,919,431	+				+0.2
3,919,432	-				-0.6
3,919,432	-				+0.4
3,919,432	-				-1.0
3,919,482	-				+1.3
3,919,482	-				+1.3
3,919,495	+				+0.2
3,919,495	+				+0.7
3,919,496	-				+0.2
3,919,496	-				+0.3