Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08570

Experiment: Cholin acetate 19 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 19 mM
1,881,329	+				-0.3
1,881,329	+				+0.3
1,881,330	-				-0.9
1,881,356	+				-0.6
1,881,356	+				+0.9
1,881,356	+				+1.3
1,881,356	+				+0.9
1,881,356	+				-0.3
1,881,356	+				-0.3
1,881,356	+				+0.7
1,881,356	+				+2.3
1,881,416	+				+1.0
1,881,752	-		AO353_08565	0.37	-0.4
1,881,752	-		AO353_08565	0.37	+1.3
1,881,778	+		AO353_08565	0.40	+2.9
1,881,778	+		AO353_08565	0.40	-1.0
1,881,779	-		AO353_08565	0.40	-1.7
1,881,779	-		AO353_08565	0.40	-1.3
1,881,784	+		AO353_08565	0.41	+0.6
1,881,784	+		AO353_08565	0.41	-0.1
1,881,784	+		AO353_08565	0.41	+2.3
1,881,784	+		AO353_08565	0.41	+2.5
1,881,785	-		AO353_08565	0.41	+0.3
1,881,785	-		AO353_08565	0.41	+2.5
1,881,785	-		AO353_08565	0.41	+1.8
1,881,785	-		AO353_08565	0.41	-0.2
1,881,799	+		AO353_08565	0.42	+0.7
1,881,799	+		AO353_08565	0.42	-1.0
1,881,799	+		AO353_08565	0.42	-1.0
1,881,799	+		AO353_08565	0.42	+0.3
1,881,799	+		AO353_08565	0.42	+1.3
1,881,799	+		AO353_08565	0.42	+1.6
1,881,800	-		AO353_08565	0.43	-0.1
1,881,907	+		AO353_08565	0.54	-1.3
1,881,907	+		AO353_08565	0.54	+0.6
1,881,969	+		AO353_08565	0.61	+1.3
1,881,969	+		AO353_08565	0.61	+1.5
1,881,969	+		AO353_08565	0.61	-1.7
1,881,969	+		AO353_08565	0.61	+0.4
1,881,970	-		AO353_08565	0.61	-0.1
1,881,970	-		AO353_08565	0.61	+2.3
1,881,970	-		AO353_08565	0.61	-0.3
1,881,970	-		AO353_08565	0.61	+1.5
1,881,970	-		AO353_08565	0.61	-1.5
1,881,998	-		AO353_08565	0.64	+1.0
1,881,998	-		AO353_08565	0.64	-1.7
1,882,066	+		AO353_08565	0.71	+0.5
1,882,066	+		AO353_08565	0.71	-0.0
1,882,067	-		AO353_08565	0.72	+1.7
1,882,078	+		AO353_08565	0.73	-0.5
1,882,078	+		AO353_08565	0.73	+0.7
1,882,078	+		AO353_08565	0.73	+0.8
1,882,078	+		AO353_08565	0.73	+0.0
1,882,078	+		AO353_08565	0.73	+0.4
1,882,078	+		AO353_08565	0.73	+0.3
1,882,078	+		AO353_08565	0.73	+0.1
1,882,078	+		AO353_08565	0.73	+0.7
1,882,078	+		AO353_08565	0.73	+1.0
1,882,078	+		AO353_08565	0.73	-1.0
1,882,078	+		AO353_08565	0.73	+1.1
1,882,078	+		AO353_08565	0.73	+0.2
1,882,078	+		AO353_08565	0.73	+1.0
1,882,079	-		AO353_08565	0.73	-0.0
1,882,079	-		AO353_08565	0.73	-0.6
1,882,105	+		AO353_08565	0.76	+0.6
1,882,105	+		AO353_08565	0.76	-2.3
1,882,105	+		AO353_08565	0.76	-0.3
1,882,105	+		AO353_08565	0.76	+2.3
1,882,105	+		AO353_08565	0.76	-0.3
1,882,105	+		AO353_08565	0.76	-0.3
1,882,105	+		AO353_08565	0.76	+0.6
1,882,105	+		AO353_08565	0.76	-0.3
1,882,106	-		AO353_08565	0.76	-0.0
1,882,106	-		AO353_08565	0.76	-0.9
1,882,106	-		AO353_08565	0.76	+1.8
1,882,106	-		AO353_08565	0.76	+3.1
1,882,147	+		AO353_08565	0.80	+2.1
1,882,147	+		AO353_08565	0.80	+3.6
1,882,147	+		AO353_08565	0.80	+0.7
1,882,147	+		AO353_08565	0.80	-0.1
1,882,147	+		AO353_08565	0.80	+0.0
1,882,147	+		AO353_08565	0.80	+2.6
1,882,147	+		AO353_08565	0.80	+1.3
1,882,147	+		AO353_08565	0.80	-1.5
1,882,147	+		AO353_08565	0.80	+1.3
1,882,147	+		AO353_08565	0.80	+0.1
1,882,148	-		AO353_08565	0.80	+0.3
1,882,148	-		AO353_08565	0.80	+0.1
1,882,148	-		AO353_08565	0.80	+1.0
1,882,148	-		AO353_08565	0.80	+0.3
1,882,148	-		AO353_08565	0.80	+1.5
1,882,148	-		AO353_08565	0.80	+1.1
1,882,148	-		AO353_08565	0.80	+0.6
1,882,148	-		AO353_08565	0.80	+1.1
1,882,148	-		AO353_08565	0.80	+1.8
1,882,148	-		AO353_08565	0.80	+1.0
1,882,148	-		AO353_08565	0.80	-0.4
1,882,148	-		AO353_08565	0.80	+0.3
1,882,153	+		AO353_08565	0.81	+1.2
1,882,153	+		AO353_08565	0.81	+0.9
1,882,153	+		AO353_08565	0.81	+0.0
1,882,153	+		AO353_08565	0.81	-2.0
1,882,153	+		AO353_08565	0.81	-1.3
1,882,153	+		AO353_08565	0.81	+4.1
1,882,153	+		AO353_08565	0.81	+0.3
1,882,153	+		AO353_08565	0.81	-0.8
1,882,153	+		AO353_08565	0.81	-0.3
1,882,153	+		AO353_08565	0.81	+1.3
1,882,153	+		AO353_08565	0.81	-2.6
1,882,153	+		AO353_08565	0.81	+0.6
1,882,153	+		AO353_08565	0.81	+0.9
1,882,153	+		AO353_08565	0.81	+2.9
1,882,153	+		AO353_08565	0.81	-0.7
1,882,154	-		AO353_08565	0.81	+0.6
1,882,154	-		AO353_08565	0.81	+0.9
1,882,154	-		AO353_08565	0.81	+1.7
1,882,154	-		AO353_08565	0.81	-1.2
1,882,154	-		AO353_08565	0.81	+1.5
1,882,154	-		AO353_08565	0.81	-0.4
1,882,154	-		AO353_08565	0.81	+0.2
1,882,154	-		AO353_08565	0.81	-2.6
1,882,154	-		AO353_08565	0.81	-0.1
1,882,154	-		AO353_08565	0.81	-1.3
1,882,154	-		AO353_08565	0.81	-0.3
1,882,154	-		AO353_08565	0.81	-0.4
1,882,165	+		AO353_08565	0.82	-1.7
1,882,165	+		AO353_08565	0.82	+0.2
1,882,290	+				-0.9
1,882,291	-				-2.6
1,882,291	-				+1.1
1,882,337	+				+0.7
1,882,337	+				-0.8
1,882,337	+				-0.2
1,882,338	-				-0.8
1,882,338	-				+1.4
1,882,368	+				+0.1
1,882,368	+				-0.3
1,882,368	+				+0.6
1,882,368	+				-1.9
1,882,368	+				+0.3
1,882,369	-				+0.8
1,882,388	-				+0.2
1,882,388	-				-0.1
1,882,458	+		AO353_08570	0.12	+2.0
1,882,458	+		AO353_08570	0.12	-0.7
1,882,458	+		AO353_08570	0.12	+2.3
1,882,458	+		AO353_08570	0.12	+1.3
1,882,458	+		AO353_08570	0.12	+0.1
1,882,458	+		AO353_08570	0.12	+1.0
1,882,458	+		AO353_08570	0.12	-0.7
1,882,458	+		AO353_08570	0.12	+0.4
1,882,458	+		AO353_08570	0.12	+0.0
1,882,458	+		AO353_08570	0.12	-1.5
1,882,458	+		AO353_08570	0.12	-0.7
1,882,458	+		AO353_08570	0.12	+3.3
1,882,458	+		AO353_08570	0.12	+0.5
1,882,459	-		AO353_08570	0.12	+1.1
1,882,459	-		AO353_08570	0.12	+1.9
1,882,459	-		AO353_08570	0.12	+1.3
1,882,459	-		AO353_08570	0.12	-1.3
1,882,459	-		AO353_08570	0.12	+3.1
1,882,482	+		AO353_08570	0.14	+0.3
1,882,620	+		AO353_08570	0.26	+0.6
1,882,620	+		AO353_08570	0.26	+0.4
1,882,620	+		AO353_08570	0.26	+1.8
1,882,620	+		AO353_08570	0.26	-1.0
1,882,620	+		AO353_08570	0.26	+2.9
1,882,620	+		AO353_08570	0.26	-1.7
1,882,620	+		AO353_08570	0.26	+1.6
1,882,620	+		AO353_08570	0.26	+0.7
1,882,620	+		AO353_08570	0.26	-0.0
1,882,621	-		AO353_08570	0.26	+2.5
1,882,621	-		AO353_08570	0.26	+0.8
1,882,621	-		AO353_08570	0.26	-2.1
1,882,621	-		AO353_08570	0.26	+1.0
1,882,621	-		AO353_08570	0.26	-0.0
1,882,621	-		AO353_08570	0.26	+0.9
1,882,621	-		AO353_08570	0.26	-0.3
1,882,621	-		AO353_08570	0.26	-2.3
1,882,621	-		AO353_08570	0.26	-2.0
1,882,649	-		AO353_08570	0.28	-0.3
1,882,746	+		AO353_08570	0.37	-0.0
1,882,746	+		AO353_08570	0.37	+0.7
1,882,746	+		AO353_08570	0.37	+1.6
1,882,746	+		AO353_08570	0.37	+4.3
1,882,746	+		AO353_08570	0.37	+1.5
1,882,746	+		AO353_08570	0.37	+1.2
1,882,747	-		AO353_08570	0.37	+0.5
1,882,747	-		AO353_08570	0.37	+1.0
1,882,747	-		AO353_08570	0.37	-1.1
1,882,747	-		AO353_08570	0.37	+1.9
1,882,747	-		AO353_08570	0.37	-0.7
1,883,035	-		AO353_08570	0.62	+2.5
1,883,143	+		AO353_08570	0.72	-0.4
1,883,143	+		AO353_08570	0.72	-0.7
1,883,144	-		AO353_08570	0.72	-1.7
1,883,144	-		AO353_08570	0.72	+0.3
1,883,144	-		AO353_08570	0.72	-0.7
1,883,144	-		AO353_08570	0.72	+0.2
1,883,144	-		AO353_08570	0.72	-0.2
1,883,144	-		AO353_08570	0.72	+1.3
1,883,144	-		AO353_08570	0.72	-1.0
1,883,161	-		AO353_08570	0.73	+1.1
1,883,161	-		AO353_08570	0.73	+2.1
1,883,193	+		AO353_08570	0.76	-0.3
1,883,194	-		AO353_08570	0.76	-1.7
1,883,194	-		AO353_08570	0.76	+0.8
1,883,216	+		AO353_08570	0.78	+1.7
1,883,216	+		AO353_08570	0.78	+1.5
1,883,217	-		AO353_08570	0.78	+0.3
1,883,217	-		AO353_08570	0.78	-1.3
1,883,217	-		AO353_08570	0.78	-0.7
1,883,217	-		AO353_08570	0.78	+1.1
1,883,217	-		AO353_08570	0.78	-0.6
1,883,245	+		AO353_08570	0.80	+0.1
1,883,318	+		AO353_08570	0.87	-0.8
1,883,318	+		AO353_08570	0.87	+0.7
1,883,318	+		AO353_08570	0.87	-0.7
1,883,318	+		AO353_08570	0.87	+0.3
1,883,319	-		AO353_08570	0.87	+1.8
1,883,319	-		AO353_08570	0.87	+1.1
1,883,319	-		AO353_08570	0.87	+0.9
1,883,319	-		AO353_08570	0.87	+0.5
1,883,443	+				-1.3
1,883,443	+				+0.7
1,883,443	+				+0.5
1,883,444	-				-1.9
1,883,444	-				+0.9
1,883,444	-				-0.4
1,883,444	-				-0.4
1,883,444	-				+1.6
1,883,444	-				-0.9
1,883,445	+				-0.3
1,883,445	+				+1.8
1,883,445	+				-1.5
1,883,445	+				-1.1
1,883,445	+				-0.2
1,883,445	+				+1.3
1,883,446	-				+0.3
1,883,446	-				-0.7
1,883,446	-				-0.4
1,883,469	+				+0.1
1,883,470	-				+1.3
1,883,470	-				+0.3
1,883,470	-				-2.0
1,883,505	-				+2.2
1,883,505	-				+0.2
1,883,521	+				+0.5
1,883,521	+				+1.1
1,883,522	-				-0.7
1,883,540	+				-1.0
1,883,540	+				-0.0
1,883,540	+				-0.9
1,883,540	+				-0.3
1,883,540	+				+2.0
1,883,540	+				+1.3
1,883,540	+				-0.0
1,883,540	+				+0.4
1,883,540	+				-0.0
1,883,541	-				-1.7
1,883,541	-				-0.6
1,883,541	-				+0.3
1,883,541	-				-0.1
1,883,615	+				+0.2
1,883,615	+				+0.3
1,883,615	+				+0.5
1,883,615	+				-0.8
1,883,615	+				+0.8
1,883,616	-				+1.6
1,883,616	-				+2.1
1,883,616	-				-0.5
1,883,616	-				+1.3
1,883,616	-				-0.7
1,883,645	+				+0.3
1,883,645	+				-2.5
1,883,645	+				-0.2
1,883,645	+				-1.4
1,883,645	+				+2.6
1,883,646	-				-1.3
1,883,661	+		AO353_08575	0.11	+0.8
1,883,662	-		AO353_08575	0.11	+2.8
1,883,662	-		AO353_08575	0.11	+0.8
1,883,662	-		AO353_08575	0.11	+0.5
1,883,755	+		AO353_08575	0.20	+0.8
1,883,755	+		AO353_08575	0.20	+1.6
1,883,755	+		AO353_08575	0.20	+0.2
1,883,755	+		AO353_08575	0.20	+1.3
1,883,755	+		AO353_08575	0.20	-0.3
1,883,755	+		AO353_08575	0.20	-0.9
1,883,755	+		AO353_08575	0.20	+0.3
1,883,755	+		AO353_08575	0.20	-0.1
1,883,755	+		AO353_08575	0.20	-0.3
1,883,755	+		AO353_08575	0.20	-0.1
1,883,755	+		AO353_08575	0.20	+0.9
1,883,755	+		AO353_08575	0.20	-0.1
1,883,755	+		AO353_08575	0.20	-0.7
1,883,755	+		AO353_08575	0.20	-1.0
1,883,755	+		AO353_08575	0.20	-0.3
1,883,755	+		AO353_08575	0.20	-0.6
1,883,755	+		AO353_08575	0.20	-0.7
1,883,755	+		AO353_08575	0.20	-0.7
1,883,755	+		AO353_08575	0.20	-0.5
1,883,755	+		AO353_08575	0.20	+1.9
1,883,756	-		AO353_08575	0.20	-0.7
1,883,756	-		AO353_08575	0.20	+1.9
1,883,756	-		AO353_08575	0.20	+1.8
1,883,756	-		AO353_08575	0.20	+0.6
1,883,756	-		AO353_08575	0.20	+0.7
1,883,756	-		AO353_08575	0.20	+1.3
1,883,756	-		AO353_08575	0.20	+0.4
1,883,756	-		AO353_08575	0.20	-0.1
1,883,759	+		AO353_08575	0.20	+2.2
1,883,759	+		AO353_08575	0.20	-0.0
1,883,759	+		AO353_08575	0.20	+1.0
1,883,759	+		AO353_08575	0.20	-0.7
1,883,759	+		AO353_08575	0.20	-0.3
1,883,759	+		AO353_08575	0.20	-0.3
1,883,759	+		AO353_08575	0.20	+0.9
1,883,759	+		AO353_08575	0.20	-1.5
1,883,759	+		AO353_08575	0.20	+0.1
1,883,759	+		AO353_08575	0.20	+1.3
1,883,759	+		AO353_08575	0.20	+1.3
1,883,759	+		AO353_08575	0.20	+1.2
1,883,759	+		AO353_08575	0.20	+0.4
1,883,759	+		AO353_08575	0.20	+1.9
1,883,760	-		AO353_08575	0.20	+0.2
1,883,760	-		AO353_08575	0.20	+0.9
1,883,760	-		AO353_08575	0.20	+1.5
1,883,760	-		AO353_08575	0.20	+0.3
1,883,760	-		AO353_08575	0.20	-0.1
1,883,760	-		AO353_08575	0.20	-0.9
1,883,760	-		AO353_08575	0.20	+0.5
1,883,760	-		AO353_08575	0.20	-0.0
1,883,760	-		AO353_08575	0.20	+0.6
1,883,760	-		AO353_08575	0.20	+1.5
1,883,760	-		AO353_08575	0.20	-0.3
1,883,760	-		AO353_08575	0.20	+0.8
1,883,760	-		AO353_08575	0.20	+1.3
1,883,760	-		AO353_08575	0.20	+1.5
1,883,760	-		AO353_08575	0.20	+0.3
1,883,760	-		AO353_08575	0.20	-2.8
1,883,910	+		AO353_08575	0.34	+0.3
1,883,966	+		AO353_08575	0.39	-1.3
1,883,966	+		AO353_08575	0.39	-1.3
1,883,966	+		AO353_08575	0.39	+0.6
1,883,966	+		AO353_08575	0.39	-2.3
1,883,966	+		AO353_08575	0.39	+2.0
1,883,966	+		AO353_08575	0.39	-2.0
1,883,966	+		AO353_08575	0.39	-0.3
1,883,966	+		AO353_08575	0.39	-0.3
1,883,966	+		AO353_08575	0.39	+0.2
1,883,966	+		AO353_08575	0.39	+0.0
1,883,967	-		AO353_08575	0.39	-0.5
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