Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3362

Experiment: A22 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.008 mg/ml
4,030,941	+				+0.2
4,031,024	+				+1.0
4,031,056	-				-1.2
4,031,128	+		Shewana3_3360	0.33	-0.2
4,031,143	+		Shewana3_3360	0.39	-0.9
4,031,143	+		Shewana3_3360	0.39	-0.9
4,031,151	-		Shewana3_3360	0.43	-0.4
4,031,198	+		Shewana3_3360	0.63	-0.4
4,031,349	+				-0.6
4,031,495	+		Shewana3_3361	0.34	+0.3
4,031,503	-		Shewana3_3361	0.35	+0.3
4,031,632	+		Shewana3_3361	0.66	-1.1
4,031,632	+		Shewana3_3361	0.66	-0.2
4,031,665	-		Shewana3_3361	0.74	-0.3
4,031,665	-		Shewana3_3361	0.74	+0.7
4,031,721	+		Shewana3_3361	0.88	-0.2
4,031,762	+				-0.0
4,031,884	+				-1.1
4,031,889	-				-0.3
4,031,907	+				-1.1
4,031,970	+		Shewana3_3362	0.11	-1.1
4,031,979	-		Shewana3_3362	0.11	-0.9
4,032,112	+		Shewana3_3362	0.22	+0.9
4,032,200	+		Shewana3_3362	0.28	-0.1
4,032,246	-		Shewana3_3362	0.32	+0.1
4,032,249	+		Shewana3_3362	0.32	-0.1
4,032,304	+		Shewana3_3362	0.36	-0.7
4,032,505	-		Shewana3_3362	0.51	+0.0
4,032,515	+		Shewana3_3362	0.52	-2.1
4,032,554	-		Shewana3_3362	0.55	-0.3
4,032,617	+		Shewana3_3362	0.60	-1.0
4,032,731	-		Shewana3_3362	0.68	-0.8
4,032,782	-		Shewana3_3362	0.72	+0.5
4,032,921	+		Shewana3_3362	0.83	-1.9
4,033,014	+		Shewana3_3362	0.90	+0.3
4,033,059	+				-0.1
4,033,099	+				+1.6
4,033,128	+				+0.9
4,033,180	+				-0.3
4,033,187	+				+0.6
4,033,187	+				-0.4
4,033,187	+				-0.6
4,033,187	+				-0.4
4,033,195	-				-0.1
4,033,195	-				+0.0
4,033,195	-				-0.2
4,033,195	-				-0.2
4,033,195	-				+0.2
4,033,195	-				+0.1
4,033,205	+				-0.4
4,033,444	-		Shewana3_3363	0.45	-0.6
4,033,516	-		Shewana3_3363	0.69	-1.9
4,033,628	-				+0.0
4,033,775	-				-0.8
4,033,792	-				-0.2
4,033,908	-		Shewana3_3364	0.18	-0.7
4,033,932	+		Shewana3_3364	0.23	+0.5
4,034,121	+		Shewana3_3364	0.66	+0.2
4,034,129	-		Shewana3_3364	0.68	+0.9