Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3352
Experiment: A22 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | A22 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 4,021,489 | - | -0.3 | |||
| 4,021,614 | - | Shewana3_3352 | 0.13 | -0.7 | |
| 4,021,654 | + | Shewana3_3352 | 0.17 | +0.9 | |
| 4,021,665 | - | Shewana3_3352 | 0.18 | -1.8 | |
| 4,021,667 | + | Shewana3_3352 | 0.19 | +0.9 | |
| 4,021,675 | - | Shewana3_3352 | 0.19 | -1.2 | |
| 4,021,812 | - | Shewana3_3352 | 0.33 | -0.8 | |
| 4,021,855 | + | Shewana3_3352 | 0.37 | -0.7 | |
| 4,021,888 | + | Shewana3_3352 | 0.40 | -2.3 | |
| 4,022,096 | - | Shewana3_3352 | 0.61 | -0.1 | |
| 4,022,126 | - | Shewana3_3352 | 0.64 | -0.5 | |
| 4,022,133 | + | Shewana3_3352 | 0.64 | -0.1 | |
| 4,022,140 | - | Shewana3_3352 | 0.65 | +0.5 | |
| 4,022,159 | + | Shewana3_3352 | 0.67 | -0.1 | |
| 4,022,167 | - | Shewana3_3352 | 0.68 | -1.5 | |
| 4,022,341 | - | Shewana3_3352 | 0.85 | -2.5 | |
| 4,022,351 | - | Shewana3_3352 | 0.86 | -2.3 | |
| 4,022,367 | - | Shewana3_3352 | 0.87 | +0.5 | |
| 4,022,465 | + | -0.8 | |||
| 4,022,568 | - | -0.2 |
Or see this region's nucleotide sequence