Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2386
Experiment: A22 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | A22 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,864,253 | - | Shewana3_2385 | 0.45 | +0.6 | |
| 2,864,386 | + | Shewana3_2385 | 0.56 | -0.4 | |
| 2,864,388 | + | Shewana3_2385 | 0.56 | +0.6 | |
| 2,864,487 | + | Shewana3_2385 | 0.65 | +0.6 | |
| 2,864,495 | - | Shewana3_2385 | 0.65 | +0.3 | |
| 2,864,550 | - | Shewana3_2385 | 0.70 | +0.6 | |
| 2,864,635 | + | Shewana3_2385 | 0.77 | +0.6 | |
| 2,864,687 | - | Shewana3_2385 | 0.82 | -0.6 | |
| 2,864,717 | + | Shewana3_2385 | 0.84 | +0.6 | |
| 2,864,870 | - | +0.3 | |||
| 2,865,400 | - | Shewana3_2386 | 0.29 | -0.0 | |
| 2,865,875 | - | Shewana3_2386 | 0.58 | -0.4 | |
| 2,866,198 | - | Shewana3_2386 | 0.77 | -2.7 | |
| 2,866,268 | - | Shewana3_2386 | 0.81 | -0.4 | |
| 2,866,849 | - | -1.4 | |||
| 2,866,865 | + | +0.6 | |||
| 2,866,873 | - | Shewana3_2387 | 0.10 | -1.7 | |
| 2,867,309 | - | Shewana3_2387 | 0.60 | +1.1 |
Or see this region's nucleotide sequence