Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2268
Experiment: A22 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,730,592 | + | Shewana3_2267 | 0.85 | +0.6 | |
2,730,593 | - | Shewana3_2267 | 0.85 | -0.4 | |
2,730,597 | + | Shewana3_2267 | 0.85 | +0.6 | |
2,730,605 | - | Shewana3_2267 | 0.85 | -2.0 | |
2,730,612 | + | Shewana3_2267 | 0.86 | -0.1 | |
2,730,733 | - | +2.6 | |||
2,731,020 | - | +0.5 | |||
2,731,664 | + | Shewana3_2268 | 0.25 | -0.0 | |
2,731,667 | - | Shewana3_2268 | 0.25 | -1.0 | |
2,731,787 | + | Shewana3_2268 | 0.35 | +0.6 | |
2,732,004 | + | Shewana3_2268 | 0.53 | -0.7 | |
2,732,404 | + | Shewana3_2268 | 0.85 | -0.8 | |
2,733,138 | + | +0.8 | |||
2,733,138 | + | +0.0 | |||
2,733,146 | - | +0.6 |
Or see this region's nucleotide sequence