Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2253
Experiment: A22 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | A22 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,714,166 | - | Shewana3_2252 | 0.34 | -0.1 | |
| 2,714,454 | + | Shewana3_2252 | 0.62 | +0.6 | |
| 2,714,651 | - | Shewana3_2252 | 0.81 | +1.6 | |
| 2,715,074 | + | -0.4 | |||
| 2,715,120 | + | +0.6 | |||
| 2,715,163 | - | Shewana3_2253 | 0.13 | -0.5 | |
| 2,715,183 | + | Shewana3_2253 | 0.16 | +0.6 | |
| 2,715,183 | + | Shewana3_2253 | 0.16 | -0.4 | |
| 2,715,321 | - | Shewana3_2253 | 0.35 | +0.6 | |
| 2,715,658 | + | Shewana3_2253 | 0.82 | -1.4 | |
| 2,715,658 | + | Shewana3_2253 | 0.82 | +0.6 | |
| 2,715,658 | + | Shewana3_2253 | 0.82 | -1.0 | |
| 2,716,034 | - | -0.4 | |||
| 2,716,036 | + | +0.6 | |||
| 2,716,294 | - | -1.0 | |||
| 2,716,527 | + | Shewana3_2254 | 0.24 | +0.6 |
Or see this region's nucleotide sequence