Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2181

Experiment: A22 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.008 mg/ml
2,614,332	+				+0.6
2,614,374	+				+0.6
2,614,390	-				+0.6
2,614,408	+				+0.6
2,614,432	-				+0.6
2,614,511	-				-0.4
2,614,558	+				+0.6
2,614,589	-				+0.1
2,614,613	-				+2.6
2,614,615	-				+0.9
2,614,647	+				+0.6
2,614,653	-				+1.1
2,614,653	-				+1.0
2,614,655	-				+1.6
2,614,655	-				+1.6
2,614,787	-				+0.6
2,614,787	-				+2.9
2,614,787	-				+0.6
2,614,789	-				+1.0
2,614,837	-				+1.6
2,614,837	-				-1.0
2,614,847	-				+0.6
2,614,847	-				-0.4
2,614,847	-				-0.0
2,614,863	-				+0.6
2,614,912	-				+1.6
2,614,920	-				-0.1
2,614,944	-		Shewana3_2180	0.12	+0.1
2,614,944	-		Shewana3_2180	0.12	+2.6
2,614,963	-		Shewana3_2180	0.19	+2.0
2,614,963	-		Shewana3_2180	0.19	+0.4
2,614,963	-		Shewana3_2180	0.19	+0.6
2,614,963	-		Shewana3_2180	0.19	+0.7
2,614,963	-		Shewana3_2180	0.19	-0.5
2,614,963	-		Shewana3_2180	0.19	-0.3
2,614,963	-		Shewana3_2180	0.19	+1.9
2,614,963	-		Shewana3_2180	0.19	+0.1
2,614,963	-		Shewana3_2180	0.19	-0.1
2,614,963	-		Shewana3_2180	0.19	+0.3
2,614,963	-		Shewana3_2180	0.19	+1.1
2,614,965	-		Shewana3_2180	0.20	+0.6
2,615,132	-		Shewana3_2180	0.76	+0.1
2,615,199	-				-1.4
2,615,244	-				+0.6
2,615,342	+				+0.6
2,615,342	+				+0.6
2,615,350	-				-1.4
2,615,403	-		Shewana3_2181	0.11	+0.3
2,615,403	-		Shewana3_2181	0.11	+0.0
2,615,480	+		Shewana3_2181	0.20	+0.6
2,615,514	-		Shewana3_2181	0.24	+0.4
2,615,526	-		Shewana3_2181	0.26	-0.2
2,615,617	-		Shewana3_2181	0.37	-1.4
2,615,617	-		Shewana3_2181	0.37	-1.8
2,615,617	-		Shewana3_2181	0.37	+0.6
2,615,689	+		Shewana3_2181	0.46	+0.6
2,615,716	-		Shewana3_2181	0.49	+0.6
2,615,772	-		Shewana3_2181	0.56	+1.1
2,615,887	+		Shewana3_2181	0.70	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	-0.4
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	-0.4
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,971	+		Shewana3_2181	0.81	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+1.6
2,615,979	-		Shewana3_2181	0.82	-0.4
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	-3.1
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	-0.0
2,615,979	-		Shewana3_2181	0.82	+2.1
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	-0.4
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,979	-		Shewana3_2181	0.82	+0.6
2,615,981	-		Shewana3_2181	0.82	+0.6
2,616,001	-		Shewana3_2181	0.84	+0.6
2,616,136	-				-0.3
2,616,183	-				-0.4
2,616,216	+				+0.6
2,616,224	+				+1.6
2,616,234	-				+0.6
2,616,274	-				+0.6
2,616,306	-				+0.6
2,616,308	+				+0.6
2,616,311	-				-0.4
2,616,317	-				+0.6
2,616,331	-				-1.0
2,616,341	+				+0.6
2,616,350	-				+0.6
2,616,404	+				+0.6
2,616,404	+				+1.6
2,616,412	-				+0.6
2,616,484	+		Shewana3_2182	0.12	-0.4
2,616,528	-		Shewana3_2182	0.14	+0.6
2,616,615	-		Shewana3_2182	0.17	+0.1
2,616,777	-		Shewana3_2182	0.23	+0.9
2,616,783	-		Shewana3_2182	0.23	+0.1
2,616,816	+		Shewana3_2182	0.24	+0.6
2,616,878	-		Shewana3_2182	0.26	-0.0
2,616,904	-		Shewana3_2182	0.27	-1.4
2,616,990	+		Shewana3_2182	0.30	+0.6