Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2067
Experiment: A22 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,473,714 | + | Shewana3_2066 | 0.40 | +1.6 | |
2,473,714 | + | Shewana3_2066 | 0.40 | +0.4 | |
2,473,748 | - | Shewana3_2066 | 0.43 | +1.0 | |
2,473,756 | - | Shewana3_2066 | 0.43 | +0.9 | |
2,473,926 | + | Shewana3_2066 | 0.54 | +0.4 | |
2,474,078 | - | Shewana3_2066 | 0.65 | +0.0 | |
2,474,078 | - | Shewana3_2066 | 0.65 | -0.4 | |
2,474,155 | + | Shewana3_2066 | 0.70 | -0.5 | |
2,474,392 | - | Shewana3_2066 | 0.85 | +0.2 | |
2,474,421 | + | Shewana3_2066 | 0.87 | +0.6 | |
2,474,517 | - | +0.3 | |||
2,474,560 | - | +0.2 | |||
2,474,620 | + | -0.1 | |||
2,474,801 | + | Shewana3_2067 | 0.19 | +1.6 | |
2,475,153 | + | Shewana3_2067 | 0.77 | +2.3 | |
2,475,367 | - | +0.6 | |||
2,475,513 | - | +0.6 | |||
2,475,563 | + | -1.0 | |||
2,475,801 | + | Shewana3_2068 | 0.38 | +0.6 | |
2,475,903 | + | Shewana3_2068 | 0.52 | +1.3 | |
2,476,059 | + | Shewana3_2068 | 0.74 | +0.5 |
Or see this region's nucleotide sequence