Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1057
Experiment: A22 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,239,242 | + | Shewana3_1056 | 0.47 | -0.8 | |
1,239,714 | - | Shewana3_1056 | 0.87 | -1.0 | |
1,239,734 | - | Shewana3_1056 | 0.89 | -1.2 | |
1,240,453 | + | -0.1 | |||
1,240,583 | - | +0.8 | |||
1,240,743 | - | Shewana3_1058 | 0.12 | -0.6 | |
1,240,796 | + | Shewana3_1058 | 0.16 | -0.4 | |
1,240,815 | - | Shewana3_1058 | 0.17 | +0.8 | |
1,240,817 | - | Shewana3_1058 | 0.18 | -0.8 | |
1,240,896 | - | Shewana3_1058 | 0.23 | -1.3 |
Or see this region's nucleotide sequence