Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1052

Experiment: A22 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.008 mg/ml
1,230,228	+				-0.5
1,230,233	+				-0.6
1,230,316	+				-0.3
1,230,335	-				-0.8
1,230,335	-				+1.0
1,230,400	+		Shewana3_1051	0.11	+1.1
1,230,482	+		Shewana3_1051	0.22	+0.5
1,230,631	-		Shewana3_1051	0.43	+0.8
1,230,757	-		Shewana3_1051	0.61	+0.8
1,230,769	+		Shewana3_1051	0.62	+0.8
1,230,779	+		Shewana3_1051	0.64	-0.2
1,230,787	-		Shewana3_1051	0.65	+0.4
1,231,085	+				-0.6
1,231,176	+				-0.1
1,231,351	-		Shewana3_1052	0.25	-0.2
1,231,351	-		Shewana3_1052	0.25	-0.2
1,231,444	-		Shewana3_1052	0.33	+0.2
1,231,444	-		Shewana3_1052	0.33	+0.8
1,231,480	+		Shewana3_1052	0.37	-0.9
1,231,706	+		Shewana3_1052	0.58	-1.3
1,231,876	-		Shewana3_1052	0.74	-0.2
1,231,917	+		Shewana3_1052	0.78	-0.5
1,231,932	-		Shewana3_1052	0.79	-0.9
1,232,128	+				-0.2
1,232,600	+		Shewana3_1053	0.13	+0.8
1,232,600	+		Shewana3_1053	0.13	+0.0
1,232,608	-		Shewana3_1053	0.13	+1.1
1,232,608	-		Shewana3_1053	0.13	+0.6
1,232,608	-		Shewana3_1053	0.13	+0.4
1,232,610	-		Shewana3_1053	0.13	+1.4
1,232,688	+		Shewana3_1053	0.16	+2.5
1,232,843	+		Shewana3_1053	0.21	+0.2
1,232,844	-		Shewana3_1053	0.21	-0.8
1,232,851	-		Shewana3_1053	0.21	-0.9
1,232,860	+		Shewana3_1053	0.21	+0.8
1,233,148	-		Shewana3_1053	0.31	-0.9