Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4203
Experiment: A22 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | A22 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 65,401 | - | Shewana3_4202 | 0.32 | +0.2 | |
| 65,424 | - | Shewana3_4202 | 0.34 | +0.0 | |
| 65,573 | + | Shewana3_4202 | 0.48 | -1.1 | |
| 65,642 | - | Shewana3_4202 | 0.55 | -0.8 | |
| 65,643 | + | Shewana3_4202 | 0.55 | +1.1 | |
| 65,705 | + | Shewana3_4202 | 0.61 | +0.9 | |
| 65,713 | - | Shewana3_4202 | 0.61 | -0.6 | |
| 65,825 | - | Shewana3_4202 | 0.72 | -0.2 | |
| 65,968 | - | Shewana3_4202 | 0.85 | -3.4 | |
| 66,140 | - | -0.6 | |||
| 66,234 | + | -0.2 | |||
| 66,332 | + | +1.1 | |||
| 66,508 | - | Shewana3_4203 | 0.52 | -0.2 | |
| 66,517 | - | Shewana3_4203 | 0.54 | -0.7 | |
| 66,703 | - | +0.0 | |||
| 66,731 | + | -0.3 | |||
| 66,731 | + | -0.7 | |||
| 66,739 | - | -0.3 | |||
| 66,784 | - | +0.1 | |||
| 66,815 | - | +0.0 | |||
| 66,903 | + | -0.2 | |||
| 67,102 | + | -0.2 | |||
| 67,150 | - | -0.5 | |||
| 67,150 | - | -0.3 | |||
| 67,240 | - | -0.6 | |||
| 67,293 | + | +0.1 | |||
| 67,314 | - | -0.1 | |||
| 67,314 | - | -0.2 | |||
| 67,335 | - | -0.1 | |||
| 67,394 | - | -0.3 | |||
| 67,394 | - | -0.5 | |||
| 67,601 | - | -0.2 | |||
| 67,649 | - | +0.2 |
Or see this region's nucleotide sequence