Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_978

Experiment: L-Histidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (C)
1,104,601	-		Pf1N1B4_976	0.45	-1.6
1,104,834	+		Pf1N1B4_977	0.22	+1.6
1,104,834	+		Pf1N1B4_977	0.22	-1.6
1,104,834	+		Pf1N1B4_977	0.22	-1.0
1,104,834	+		Pf1N1B4_977	0.22	-0.1
1,104,834	+		Pf1N1B4_977	0.22	-0.4
1,104,834	+		Pf1N1B4_977	0.22	-1.6
1,104,834	+		Pf1N1B4_977	0.22	-2.3
1,104,835	-		Pf1N1B4_977	0.22	-0.6
1,104,835	-		Pf1N1B4_977	0.22	-1.8
1,104,835	-		Pf1N1B4_977	0.22	-1.8
1,104,835	-		Pf1N1B4_977	0.22	-1.6
1,104,835	-		Pf1N1B4_977	0.22	-0.6
1,104,943	+		Pf1N1B4_977	0.45	-0.0
1,105,168	+				-1.6
1,105,168	+				-1.0
1,105,168	+				-1.3
1,105,168	+				-1.1
1,105,168	+				-1.6
1,105,168	+				-0.6
1,105,169	-				-1.6
1,105,210	+				-2.0
1,105,211	-				+0.6
1,105,235	+				-0.6
1,105,235	+				-1.1
1,105,268	+				-1.2
1,105,328	+				+0.2
1,105,335	+				+1.0
1,105,336	-				-0.6
1,105,380	+				+1.0
1,105,380	+				+1.0
1,105,380	+				-0.0
1,105,380	+				-0.8
1,105,380	+				-0.6
1,105,384	+				+0.7
1,105,384	+				-0.0
1,105,384	+				+0.4
1,105,384	+				-0.6
1,105,384	+				-0.6
1,105,384	+				+2.8
1,105,384	+				-0.9
1,105,385	-				-0.0
1,105,385	-				-0.6
1,105,385	-				-1.0
1,105,385	-				-0.0
1,105,385	-				-0.3
1,105,385	-				-0.6
1,105,385	-				-0.3
1,105,385	-				+1.6
1,105,394	-				+0.6
1,105,394	-				-0.2
1,105,502	+				-1.2
1,105,502	+				+1.0
1,105,502	+				-0.6
1,105,502	+				-2.2
1,105,502	+				-0.4
1,105,502	+				-1.9
1,105,502	+				-2.6
1,105,503	-				-0.0
1,105,503	-				-0.4
1,105,503	-				-1.6
1,105,503	-				-1.0
1,105,503	-				-2.0
1,105,503	-				-1.0
1,105,503	-				-1.0
1,105,539	+				-1.3
1,105,539	+				-1.0
1,105,539	+				-0.6
1,105,539	+				+0.7
1,105,539	+				-2.0
1,105,540	-				-1.2
1,105,540	-				-1.0
1,105,540	-				-1.2
1,105,540	-				-0.0
1,105,540	-				+1.6
1,105,540	-				-0.4
1,105,540	-				-0.0
1,105,569	+				+1.0
1,105,570	-				-1.6
1,105,660	+		Pf1N1B4_978	0.16	-1.0
1,105,660	+		Pf1N1B4_978	0.16	-2.6
1,105,661	-		Pf1N1B4_978	0.16	+1.6
1,105,719	+		Pf1N1B4_978	0.20	+1.0
1,105,719	+		Pf1N1B4_978	0.20	+0.6
1,105,719	+		Pf1N1B4_978	0.20	-0.8
1,105,719	+		Pf1N1B4_978	0.20	-3.0
1,105,719	+		Pf1N1B4_978	0.20	-0.0
1,105,719	+		Pf1N1B4_978	0.20	-1.3
1,105,719	+		Pf1N1B4_978	0.20	-0.3
1,105,719	+		Pf1N1B4_978	0.20	-1.6
1,105,719	+		Pf1N1B4_978	0.20	-1.1
1,105,719	+		Pf1N1B4_978	0.20	-0.7
1,105,720	-		Pf1N1B4_978	0.20	-2.4
1,105,720	-		Pf1N1B4_978	0.20	-2.6
1,105,720	-		Pf1N1B4_978	0.20	-3.3
1,105,720	-				+1.0
1,105,720	-		Pf1N1B4_978	0.20	-2.0
1,105,720	-		Pf1N1B4_978	0.20	-0.3
1,105,761	+		Pf1N1B4_978	0.23	-2.8
1,105,761	+		Pf1N1B4_978	0.23	-1.0
1,105,761	+		Pf1N1B4_978	0.23	-0.7
1,105,761	+		Pf1N1B4_978	0.23	-1.0
1,105,761	+		Pf1N1B4_978	0.23	-1.6
1,105,762	-		Pf1N1B4_978	0.23	+1.3
1,105,762	-		Pf1N1B4_978	0.23	-2.8
1,105,762	-		Pf1N1B4_978	0.23	-0.0
1,105,762	-		Pf1N1B4_978	0.23	-1.6
1,105,762	-		Pf1N1B4_978	0.23	-2.3
1,105,762	-		Pf1N1B4_978	0.23	+1.6
1,106,037	+		Pf1N1B4_978	0.43	+0.6
1,106,038	-		Pf1N1B4_978	0.43	-0.6
1,106,038	-		Pf1N1B4_978	0.43	-0.7
1,106,055	+				-1.0
1,106,055	+		Pf1N1B4_978	0.44	-0.6
1,106,055	+		Pf1N1B4_978	0.44	-2.0
1,106,055	+		Pf1N1B4_978	0.44	-0.5
1,106,056	-		Pf1N1B4_978	0.44	-0.0
1,106,056	-		Pf1N1B4_978	0.44	-0.4
1,106,355	+		Pf1N1B4_978	0.66	+1.6
1,106,355	+		Pf1N1B4_978	0.66	-2.3
1,106,355	+		Pf1N1B4_978	0.66	-1.0
1,106,356	-		Pf1N1B4_978	0.66	-1.2
1,106,356	-		Pf1N1B4_978	0.66	-1.7
1,106,356	-		Pf1N1B4_978	0.66	-0.0
1,106,356	-		Pf1N1B4_978	0.66	-1.2
1,106,740	+				+1.2
1,106,740	+				+0.7
1,106,740	+				+0.6
1,106,740	+				-1.6
1,106,768	+				-2.6
1,106,768	+				-0.8
1,106,769	-				-1.0
1,106,783	+				-0.3
1,106,783	+				-1.0
1,106,783	+				-2.0
1,106,783	+				-0.7
1,106,784	-				-1.0
1,106,784	-				-1.0
1,106,784	-				-1.0
1,106,787	+				+0.7
1,106,787	+				-0.7
1,106,787	+				-1.6
1,106,787	+				-1.0
1,106,787	+				-2.3
1,106,787	+				-2.3
1,106,788	-				+2.0
1,106,788	-				-1.0
1,106,815	+				-0.0
1,106,815	+				-0.0
1,106,833	+				-0.6
1,106,868	+				-1.0
1,106,869	-				-2.6
1,106,869	-				-0.0
1,106,869	-				+0.3
1,106,873	+				-2.0
1,106,993	+				-0.4
1,106,993	+				-0.0
1,106,994	-				-0.2
1,106,994	-				-0.0
1,106,994	-				+0.5
1,106,996	+				-0.0
1,106,996	+				-0.0
1,107,046	+				-0.5
1,107,227	-				-1.6
1,107,462	+		Pf1N1B4_979	0.26	+0.4
1,107,462	+		Pf1N1B4_979	0.26	-1.6
1,107,462	+				-0.0
1,107,463	-		Pf1N1B4_979	0.26	-0.6
1,107,463	-		Pf1N1B4_979	0.26	+1.0
1,107,463	-		Pf1N1B4_979	0.26	+0.7
1,107,463	-		Pf1N1B4_979	0.26	-2.0
1,107,582	+		Pf1N1B4_979	0.37	+2.3
1,107,582	+		Pf1N1B4_979	0.37	-2.0
1,107,582	+		Pf1N1B4_979	0.37	-1.0
1,107,582	+		Pf1N1B4_979	0.37	-1.9
1,107,583	-		Pf1N1B4_979	0.37	-0.7
1,107,583	-		Pf1N1B4_979	0.37	+0.7
1,107,583	-		Pf1N1B4_979	0.37	+0.3
1,107,655	+		Pf1N1B4_979	0.43	+1.2
1,107,656	-		Pf1N1B4_979	0.43	-0.0
1,107,681	+		Pf1N1B4_979	0.45	-1.1
1,107,682	-		Pf1N1B4_979	0.46	-0.0
1,107,703	+		Pf1N1B4_979	0.47	-0.8
1,107,704	-		Pf1N1B4_979	0.47	-0.4
1,107,704	-		Pf1N1B4_979	0.47	+1.0
1,107,704	-		Pf1N1B4_979	0.47	+0.4
1,107,780	+		Pf1N1B4_979	0.54	+2.5