Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2989

Experiment: L-Histidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (C)
3,356,860	-		Pf1N1B4_2988	0.65	+0.0
3,356,896	-		Pf1N1B4_2988	0.66	+0.0
3,356,896	-		Pf1N1B4_2988	0.66	-0.8
3,357,058	+		Pf1N1B4_2988	0.72	-0.6
3,357,058	+		Pf1N1B4_2988	0.72	-0.5
3,357,059	-		Pf1N1B4_2988	0.72	-0.7
3,357,114	+		Pf1N1B4_2988	0.74	-0.8
3,357,366	+		Pf1N1B4_2988	0.83	+0.5
3,357,375	+				+0.0
3,357,375	+		Pf1N1B4_2988	0.83	-0.7
3,357,375	+		Pf1N1B4_2988	0.83	+0.0
3,357,375	+		Pf1N1B4_2988	0.83	+2.8
3,357,376	-		Pf1N1B4_2988	0.83	-0.5
3,357,528	+		Pf1N1B4_2988	0.88	-0.3
3,357,528	+		Pf1N1B4_2988	0.88	-1.0
3,357,528	+		Pf1N1B4_2988	0.88	-0.8
3,357,528	+		Pf1N1B4_2988	0.88	-1.0
3,357,528	+		Pf1N1B4_2988	0.88	+0.6
3,357,528	+		Pf1N1B4_2988	0.88	+1.0
3,357,528	+		Pf1N1B4_2988	0.88	+1.0
3,357,528	+		Pf1N1B4_2988	0.88	-0.6
3,357,528	+		Pf1N1B4_2988	0.88	-1.3
3,357,528	+		Pf1N1B4_2988	0.88	+0.2
3,357,528	+		Pf1N1B4_2988	0.88	+0.3
3,357,528	+		Pf1N1B4_2988	0.88	+0.9
3,357,528	+		Pf1N1B4_2988	0.88	+0.0
3,357,529	-		Pf1N1B4_2988	0.88	+0.4
3,357,529	-		Pf1N1B4_2988	0.88	+0.9
3,357,529	-		Pf1N1B4_2988	0.88	-0.3
3,357,529	-		Pf1N1B4_2988	0.88	-2.3
3,357,529	-		Pf1N1B4_2988	0.88	-2.6
3,357,529	-		Pf1N1B4_2988	0.88	+0.6
3,357,529	-		Pf1N1B4_2988	0.88	-0.3
3,357,529	-		Pf1N1B4_2988	0.88	-0.4
3,357,529	-		Pf1N1B4_2988	0.88	+0.6
3,357,529	-		Pf1N1B4_2988	0.88	+0.0
3,357,529	-		Pf1N1B4_2988	0.88	-0.2
3,357,529	-		Pf1N1B4_2988	0.88	-2.0
3,357,529	-		Pf1N1B4_2988	0.88	-0.3
3,357,529	-		Pf1N1B4_2988	0.88	+0.6
3,357,529	-		Pf1N1B4_2988	0.88	-1.0
3,357,529	-		Pf1N1B4_2988	0.88	-1.3
3,357,905	+				+0.0
3,357,905	+				+0.6
3,357,905	+				-1.0
3,357,905	+				+0.0
3,357,905	+				-1.0
3,357,905	+				-2.8
3,357,905	+				-2.3
3,357,905	+				-0.4
3,357,906	-				-1.0
3,357,906	-				-0.1
3,357,906	-				+0.0
3,357,906	-				-0.6
3,357,965	+				-0.4
3,358,051	+		Pf1N1B4_2989	0.12	-0.6
3,358,221	-		Pf1N1B4_2989	0.23	+0.3
3,358,233	+		Pf1N1B4_2989	0.24	-1.3
3,358,322	+				-2.0
3,358,617	+		Pf1N1B4_2989	0.48	-2.0
3,358,617	+		Pf1N1B4_2989	0.48	+0.4
3,358,617	+		Pf1N1B4_2989	0.48	-1.0
3,358,617	+				+1.0
3,358,617	+		Pf1N1B4_2989	0.48	+0.5
3,358,617	+		Pf1N1B4_2989	0.48	+0.8
3,358,618	-		Pf1N1B4_2989	0.49	-2.0
3,358,618	-		Pf1N1B4_2989	0.49	+0.0
3,358,618	-		Pf1N1B4_2989	0.49	+2.0
3,358,618	-		Pf1N1B4_2989	0.49	-0.3
3,358,618	-		Pf1N1B4_2989	0.49	-0.6
3,358,618	-		Pf1N1B4_2989	0.49	+0.0
3,358,619	+		Pf1N1B4_2989	0.49	-0.6
3,358,619	+		Pf1N1B4_2989	0.49	-1.0
3,358,619	+		Pf1N1B4_2989	0.49	+1.2
3,358,619	+		Pf1N1B4_2989	0.49	+0.3
3,358,619	+		Pf1N1B4_2989	0.49	-1.8
3,358,619	+		Pf1N1B4_2989	0.49	+0.0
3,358,619	+		Pf1N1B4_2989	0.49	-1.0
3,358,620	-		Pf1N1B4_2989	0.49	-1.0
3,358,620	-		Pf1N1B4_2989	0.49	+0.4
3,358,620	-		Pf1N1B4_2989	0.49	+0.2
3,358,620	-		Pf1N1B4_2989	0.49	+0.4
3,358,620	-		Pf1N1B4_2989	0.49	+0.6
3,358,620	-		Pf1N1B4_2989	0.49	+0.2
3,358,620	-		Pf1N1B4_2989	0.49	+0.4
3,358,620	-		Pf1N1B4_2989	0.49	-0.6
3,358,620	-		Pf1N1B4_2989	0.49	-0.4
3,358,746	-		Pf1N1B4_2989	0.57	+0.4
3,358,760	+		Pf1N1B4_2989	0.58	+0.0
3,358,760	+		Pf1N1B4_2989	0.58	-1.1
3,358,760	+		Pf1N1B4_2989	0.58	+0.0
3,358,760	+				+1.6
3,358,760	+		Pf1N1B4_2989	0.58	-0.7
3,358,760	+		Pf1N1B4_2989	0.58	+0.8
3,358,760	+		Pf1N1B4_2989	0.58	-1.0
3,358,760	+		Pf1N1B4_2989	0.58	-0.4
3,358,760	+		Pf1N1B4_2989	0.58	+1.6
3,358,760	+		Pf1N1B4_2989	0.58	+0.3
3,358,760	+		Pf1N1B4_2989	0.58	+1.0
3,358,760	+		Pf1N1B4_2989	0.58	-0.2
3,358,761	-		Pf1N1B4_2989	0.58	+1.2
3,358,761	-		Pf1N1B4_2989	0.58	+1.0
3,358,761	-		Pf1N1B4_2989	0.58	-0.6
3,358,761	-		Pf1N1B4_2989	0.58	+0.5
3,358,761	-		Pf1N1B4_2989	0.58	-0.3
3,358,761	-		Pf1N1B4_2989	0.58	-1.4
3,358,761	-				-1.0
3,358,761	-		Pf1N1B4_2989	0.58	-1.0
3,358,761	-		Pf1N1B4_2989	0.58	+0.2
3,358,761	-		Pf1N1B4_2989	0.58	-0.2
3,358,761	-		Pf1N1B4_2989	0.58	-2.0
3,358,761	-		Pf1N1B4_2989	0.58	-0.4
3,358,761	-		Pf1N1B4_2989	0.58	+1.2
3,358,761	-		Pf1N1B4_2989	0.58	+1.0
3,358,766	+		Pf1N1B4_2989	0.58	-1.6
3,358,766	+		Pf1N1B4_2989	0.58	-1.4
3,358,766	+		Pf1N1B4_2989	0.58	-2.0
3,358,766	+		Pf1N1B4_2989	0.58	-0.6
3,358,766	+		Pf1N1B4_2989	0.58	+0.0
3,358,766	+		Pf1N1B4_2989	0.58	-0.8
3,358,766	+		Pf1N1B4_2989	0.58	-0.7
3,358,766	+		Pf1N1B4_2989	0.58	-1.2
3,358,772	+		Pf1N1B4_2989	0.58	+0.0
3,358,772	+		Pf1N1B4_2989	0.58	-1.6
3,358,773	-		Pf1N1B4_2989	0.58	+0.0
3,358,773	-		Pf1N1B4_2989	0.58	+0.0
3,358,895	+		Pf1N1B4_2989	0.66	+0.0
3,358,895	+				-0.6
3,358,896	-		Pf1N1B4_2989	0.66	-0.9
3,358,896	-		Pf1N1B4_2989	0.66	+1.6
3,358,896	-		Pf1N1B4_2989	0.66	+1.0
3,358,896	-				-1.0
3,358,896	-		Pf1N1B4_2989	0.66	-0.7
3,358,896	-		Pf1N1B4_2989	0.66	+1.2
3,358,896	-		Pf1N1B4_2989	0.66	+0.0
3,358,896	-		Pf1N1B4_2989	0.66	+0.5
3,358,896	-		Pf1N1B4_2989	0.66	+0.0
3,358,896	-		Pf1N1B4_2989	0.66	+0.0
3,358,896	-		Pf1N1B4_2989	0.66	+0.0
3,358,896	-		Pf1N1B4_2989	0.66	+0.0
3,359,405	+				+0.4
3,359,406	-				-2.3
3,359,406	-				-0.4
3,359,406	-				-0.1
3,359,533	+		Pf1N1B4_2990	0.24	-0.6
3,359,533	+		Pf1N1B4_2990	0.24	-2.0
3,359,533	+		Pf1N1B4_2990	0.24	+0.9
3,359,534	-		Pf1N1B4_2990	0.24	-0.2
3,359,534	-		Pf1N1B4_2990	0.24	-0.6
3,359,534	-		Pf1N1B4_2990	0.24	-2.0
3,359,666	+		Pf1N1B4_2990	0.52	+0.4
3,359,666	+		Pf1N1B4_2990	0.52	+0.0
3,359,701	+		Pf1N1B4_2990	0.59	+1.0
3,359,701	+		Pf1N1B4_2990	0.59	-1.3
3,359,701	+		Pf1N1B4_2990	0.59	-0.9
3,359,701	+		Pf1N1B4_2990	0.59	-0.6
3,359,702	-		Pf1N1B4_2990	0.60	-1.8
3,359,702	-		Pf1N1B4_2990	0.60	-1.0
3,359,702	-		Pf1N1B4_2990	0.60	-0.2
3,359,702	-		Pf1N1B4_2990	0.60	+0.0
3,359,702	-		Pf1N1B4_2990	0.60	-2.0
3,359,702	-		Pf1N1B4_2990	0.60	+1.6
3,359,702	-				+0.0
3,359,702	-		Pf1N1B4_2990	0.60	+0.6
3,359,702	-		Pf1N1B4_2990	0.60	+0.8
3,359,702	-		Pf1N1B4_2990	0.60	+0.0
3,359,702	-		Pf1N1B4_2990	0.60	+1.0
3,359,782	+		Pf1N1B4_2990	0.76	+0.0
3,359,782	+		Pf1N1B4_2990	0.76	+0.0
3,359,782	+				+0.0
3,359,868	-				+0.0
3,359,894	+				+0.4
3,359,894	+				-1.0
3,359,894	+				-0.6
3,359,895	-				+0.4
3,359,895	-				+0.6
3,359,895	-				+1.7
3,360,068	+		Pf1N1B4_2991	0.49	+0.0
3,360,145	+		Pf1N1B4_2991	0.77	-0.2
3,360,145	+		Pf1N1B4_2991	0.77	-0.1
3,360,146	-		Pf1N1B4_2991	0.77	+0.3
3,360,146	-		Pf1N1B4_2991	0.77	-1.4
3,360,146	-		Pf1N1B4_2991	0.77	+0.6
3,360,146	-		Pf1N1B4_2991	0.77	+1.0
3,360,146	-		Pf1N1B4_2991	0.77	-0.6
3,360,151	+		Pf1N1B4_2991	0.79	+0.0
3,360,151	+		Pf1N1B4_2991	0.79	-0.4
3,360,151	+		Pf1N1B4_2991	0.79	+0.6
3,360,151	+		Pf1N1B4_2991	0.79	-1.3
3,360,152	-		Pf1N1B4_2991	0.80	-0.5
3,360,186	+				-0.4
3,360,186	+				-0.7
3,360,186	+				+2.3
3,360,186	+				+0.0
3,360,197	+				-0.2
3,360,198	-				-1.6
3,360,252	-				+0.0
3,360,287	-				-0.7
3,360,346	+		Pf1N1B4_2992	0.11	+0.0
3,360,347	-		Pf1N1B4_2992	0.12	+1.0
3,360,347	-		Pf1N1B4_2992	0.12	-1.1
3,360,347	-				+0.0
3,360,347	-		Pf1N1B4_2992	0.12	-1.2
3,360,347	-		Pf1N1B4_2992	0.12	-2.0
3,360,364	+		Pf1N1B4_2992	0.17	-1.0
3,360,364	+		Pf1N1B4_2992	0.17	-1.6
3,360,365	-		Pf1N1B4_2992	0.17	-2.3
3,360,365	-		Pf1N1B4_2992	0.17	+0.0
3,360,365	-		Pf1N1B4_2992	0.17	-2.3
3,360,365	-		Pf1N1B4_2992	0.17	-2.0
3,360,365	-		Pf1N1B4_2992	0.17	-1.0