Experiment: LB, pH10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_840 and Ac3H11_841 are separated by 17 nucleotides Ac3H11_841 and Ac3H11_842 are separated by 181 nucleotides Ac3H11_842 and Ac3H11_843 are separated by 163 nucleotides
Ac3H11_840 - putative cinnamoyl-CoA reductase, at 121,717 to 122,745
_840
Ac3H11_841 - hypothetical protein, at 122,763 to 123,155
_841
Ac3H11_842 - Predicted transcriptional regulator, at 123,337 to 124,068
_842
Ac3H11_843 - FIG01198984: hypothetical protein, at 124,232 to 125,074
_843
Position (kb)
123
124
125 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 122.701 kb on + strand at 122.701 kb on + strand at 122.701 kb on + strand at 122.701 kb on + strand at 122.701 kb on + strand at 122.701 kb on + strand at 122.702 kb on - strand at 122.702 kb on - strand at 122.702 kb on - strand at 122.702 kb on - strand at 122.702 kb on - strand at 122.702 kb on - strand at 122.726 kb on + strand at 122.726 kb on + strand at 123.036 kb on - strand, within Ac3H11_841 at 123.118 kb on + strand at 123.119 kb on - strand at 123.119 kb on - strand at 123.119 kb on - strand at 123.323 kb on - strand at 123.323 kb on - strand at 123.398 kb on + strand at 123.398 kb on + strand at 123.566 kb on + strand, within Ac3H11_842 at 123.567 kb on - strand, within Ac3H11_842 at 123.593 kb on + strand, within Ac3H11_842 at 123.593 kb on + strand, within Ac3H11_842 at 123.593 kb on + strand, within Ac3H11_842 at 123.594 kb on - strand, within Ac3H11_842 at 123.594 kb on - strand, within Ac3H11_842 at 123.594 kb on - strand, within Ac3H11_842 at 123.594 kb on - strand, within Ac3H11_842 at 123.594 kb on - strand, within Ac3H11_842 at 123.704 kb on + strand, within Ac3H11_842 at 123.704 kb on + strand, within Ac3H11_842 at 123.704 kb on + strand, within Ac3H11_842 at 123.705 kb on - strand, within Ac3H11_842 at 123.705 kb on - strand, within Ac3H11_842 at 123.735 kb on - strand, within Ac3H11_842 at 123.735 kb on - strand, within Ac3H11_842 at 123.735 kb on - strand, within Ac3H11_842 at 124.004 kb on + strand at 124.004 kb on + strand at 124.004 kb on + strand at 124.005 kb on - strand at 124.005 kb on - strand at 124.005 kb on - strand at 124.005 kb on - strand at 124.114 kb on - strand at 124.114 kb on - strand at 124.118 kb on - strand at 124.118 kb on - strand at 124.404 kb on + strand, within Ac3H11_843 at 124.404 kb on + strand, within Ac3H11_843 at 124.404 kb on + strand, within Ac3H11_843 at 124.404 kb on + strand, within Ac3H11_843 at 124.404 kb on + strand, within Ac3H11_843 at 124.404 kb on + strand, within Ac3H11_843 at 124.404 kb on + strand, within Ac3H11_843 at 124.405 kb on - strand, within Ac3H11_843 at 124.405 kb on - strand, within Ac3H11_843 at 124.405 kb on - strand, within Ac3H11_843 at 124.405 kb on - strand, within Ac3H11_843 at 124.405 kb on - strand, within Ac3H11_843 at 124.405 kb on - strand, within Ac3H11_843 at 124.548 kb on - strand, within Ac3H11_843 at 124.677 kb on + strand, within Ac3H11_843 at 124.677 kb on + strand, within Ac3H11_843 at 124.677 kb on + strand, within Ac3H11_843 at 124.677 kb on + strand, within Ac3H11_843 at 124.678 kb on - strand, within Ac3H11_843 at 124.678 kb on - strand, within Ac3H11_843 at 124.678 kb on - strand, within Ac3H11_843 at 124.678 kb on - strand, within Ac3H11_843 at 124.818 kb on + strand, within Ac3H11_843 at 124.818 kb on + strand, within Ac3H11_843 at 124.819 kb on - strand, within Ac3H11_843 at 124.844 kb on + strand, within Ac3H11_843 at 124.844 kb on + strand, within Ac3H11_843 at 124.845 kb on - strand, within Ac3H11_843 at 124.845 kb on - strand, within Ac3H11_843 at 124.845 kb on - strand, within Ac3H11_843 at 124.894 kb on + strand, within Ac3H11_843 at 124.895 kb on - strand, within Ac3H11_843 at 124.895 kb on - strand, within Ac3H11_843 at 124.895 kb on - strand, within Ac3H11_843 at 124.895 kb on - strand, within Ac3H11_843 at 124.898 kb on + strand, within Ac3H11_843 at 124.898 kb on + strand, within Ac3H11_843 at 124.899 kb on - strand, within Ac3H11_843 at 124.899 kb on - strand, within Ac3H11_843 at 124.899 kb on - strand, within Ac3H11_843 at 124.899 kb on - strand, within Ac3H11_843
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH10 remove 122,701 + -1.4 122,701 + +1.7 122,701 + +0.6 122,701 + -0.7 122,701 + -2.1 122,701 + -0.9 122,702 - -0.2 122,702 - -1.1 122,702 - -0.3 122,702 - +0.3 122,702 - +1.0 122,702 - +0.3 122,726 + +2.0 122,726 + +0.1 123,036 - Ac3H11_841 0.69 -1.4 123,118 + +1.8 123,119 - -0.2 123,119 - +0.1 123,119 - +0.7 123,323 - +1.7 123,323 - +1.8 123,398 + +0.5 123,398 + -0.2 123,566 + Ac3H11_842 0.31 -0.4 123,567 - Ac3H11_842 0.31 +1.2 123,593 + Ac3H11_842 0.35 +1.1 123,593 + Ac3H11_842 0.35 +2.3 123,593 + Ac3H11_842 0.35 -0.4 123,594 - Ac3H11_842 0.35 +3.3 123,594 - Ac3H11_842 0.35 -0.1 123,594 - Ac3H11_842 0.35 +0.0 123,594 - Ac3H11_842 0.35 -1.2 123,594 - Ac3H11_842 0.35 +2.3 123,704 + Ac3H11_842 0.50 +0.7 123,704 + Ac3H11_842 0.50 -0.8 123,704 + Ac3H11_842 0.50 +0.3 123,705 - Ac3H11_842 0.50 -1.9 123,705 - Ac3H11_842 0.50 -2.0 123,735 - Ac3H11_842 0.54 -0.8 123,735 - Ac3H11_842 0.54 -0.4 123,735 - Ac3H11_842 0.54 +0.8 124,004 + -1.7 124,004 + -0.9 124,004 + -1.6 124,005 - -0.5 124,005 - +0.9 124,005 - +0.2 124,005 - -0.4 124,114 - -1.2 124,114 - +3.3 124,118 - +1.6 124,118 - +0.2 124,404 + Ac3H11_843 0.20 +0.2 124,404 + Ac3H11_843 0.20 +0.9 124,404 + Ac3H11_843 0.20 -1.7 124,404 + Ac3H11_843 0.20 +0.8 124,404 + Ac3H11_843 0.20 +0.3 124,404 + Ac3H11_843 0.20 -0.4 124,404 + Ac3H11_843 0.20 +1.3 124,405 - Ac3H11_843 0.21 +1.3 124,405 - Ac3H11_843 0.21 -1.7 124,405 - Ac3H11_843 0.21 +0.2 124,405 - Ac3H11_843 0.21 +0.4 124,405 - Ac3H11_843 0.21 +1.5 124,405 - Ac3H11_843 0.21 -1.6 124,548 - Ac3H11_843 0.37 +0.1 124,677 + Ac3H11_843 0.53 -1.9 124,677 + Ac3H11_843 0.53 -0.4 124,677 + Ac3H11_843 0.53 +0.4 124,677 + Ac3H11_843 0.53 +0.4 124,678 - Ac3H11_843 0.53 -0.2 124,678 - Ac3H11_843 0.53 -0.1 124,678 - Ac3H11_843 0.53 -0.5 124,678 - Ac3H11_843 0.53 +1.4 124,818 + Ac3H11_843 0.70 -1.0 124,818 + Ac3H11_843 0.70 -1.9 124,819 - Ac3H11_843 0.70 +0.8 124,844 + Ac3H11_843 0.73 -0.1 124,844 + Ac3H11_843 0.73 +0.5 124,845 - Ac3H11_843 0.73 +0.9 124,845 - Ac3H11_843 0.73 +1.3 124,845 - Ac3H11_843 0.73 +0.1 124,894 + Ac3H11_843 0.79 +1.6 124,895 - Ac3H11_843 0.79 +1.1 124,895 - Ac3H11_843 0.79 +1.6 124,895 - Ac3H11_843 0.79 +0.9 124,895 - Ac3H11_843 0.79 -0.0 124,898 + Ac3H11_843 0.79 +1.4 124,898 + Ac3H11_843 0.79 +1.0 124,899 - Ac3H11_843 0.79 -0.4 124,899 - Ac3H11_843 0.79 -1.3 124,899 - Ac3H11_843 0.79 -0.4 124,899 - Ac3H11_843 0.79 -1.4
Or see this region's nucleotide sequence