Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21010

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
4,591,001	+				+0.2
4,591,001	+				+0.6
4,591,001	+				-0.2
4,591,001	+				-0.1
4,591,001	+				-1.2
4,591,001	+				+0.4
4,591,001	+				+0.5
4,591,001	+				+0.5
4,591,002	-				+0.2
4,591,002	-				+0.5
4,591,264	+		AO353_21005	0.29	+1.3
4,591,264	+		AO353_21005	0.29	+0.8
4,591,264	+		AO353_21005	0.29	-0.4
4,591,264	+		AO353_21005	0.29	-0.2
4,591,265	-		AO353_21005	0.29	+1.4
4,591,265	-		AO353_21005	0.29	-0.8
4,591,265	-		AO353_21005	0.29	+1.3
4,591,265	-		AO353_21005	0.29	-2.4
4,591,626	+		AO353_21005	0.72	+0.4
4,591,626	+		AO353_21005	0.72	-1.2
4,591,627	-		AO353_21005	0.72	-1.2
4,591,630	+		AO353_21005	0.72	-1.2
4,591,630	+		AO353_21005	0.72	-0.8
4,591,630	+		AO353_21005	0.72	-0.2
4,591,630	+		AO353_21005	0.72	-1.8
4,591,630	+		AO353_21005	0.72	+1.4
4,591,630	+		AO353_21005	0.72	-2.2
4,591,631	-		AO353_21005	0.72	-0.5
4,591,631	-		AO353_21005	0.72	+0.1
4,591,631	-		AO353_21005	0.72	+0.9
4,591,631	-		AO353_21005	0.72	-2.6
4,591,650	-		AO353_21005	0.74	-0.8
4,591,650	-		AO353_21005	0.74	-0.4
4,591,714	+		AO353_21005	0.82	+0.4
4,591,714	+		AO353_21005	0.82	-0.6
4,591,714	+		AO353_21005	0.82	+0.3
4,591,714	+		AO353_21005	0.82	+0.1
4,591,714	+		AO353_21005	0.82	+0.8
4,591,714	+		AO353_21005	0.82	-0.1
4,591,714	+		AO353_21005	0.82	-1.1
4,591,714	+		AO353_21005	0.82	-0.5
4,591,715	-		AO353_21005	0.82	+0.1
4,591,715	-		AO353_21005	0.82	+1.8
4,591,715	-				+0.4
4,591,715	-		AO353_21005	0.82	-0.8
4,591,715	-		AO353_21005	0.82	-1.2
4,591,715	-		AO353_21005	0.82	+0.1
4,591,715	-		AO353_21005	0.82	-0.2
4,591,726	+		AO353_21005	0.83	-2.6
4,591,726	+		AO353_21005	0.83	+1.0
4,591,727	-		AO353_21005	0.84	+0.8
4,591,861	+				+0.3
4,591,861	+				+0.5
4,591,861	+				-0.4
4,591,861	+				+1.8
4,591,861	+				+1.2
4,591,862	-				-2.0
4,591,862	-				+0.8
4,591,936	+				-2.2
4,591,937	-				-0.2
4,591,937	-				-0.0
4,591,937	-				-0.4
4,591,939	+				+0.8
4,591,939	+				-0.9
4,591,939	+				-0.0
4,591,939	+				+0.3
4,591,939	+				-0.2
4,591,939	+				-0.2
4,591,940	-				+0.0
4,591,940	-				-0.9
4,591,940	-				+0.1
4,591,948	+				+1.2
4,591,948	+				+1.0
4,591,948	+				-0.1
4,591,949	-				-0.8
4,591,949	-				-0.3
4,592,104	+		AO353_21010	0.14	+0.5
4,592,104	+		AO353_21010	0.14	-2.2
4,592,104	+		AO353_21010	0.14	-0.9
4,592,105	-		AO353_21010	0.14	-1.5
4,592,105	-		AO353_21010	0.14	+0.6
4,592,105	-		AO353_21010	0.14	-1.5
4,592,298	+		AO353_21010	0.33	-0.4
4,592,399	-		AO353_21010	0.42	-1.0
4,592,432	-				+0.8
4,592,432	-		AO353_21010	0.45	+0.8
4,592,432	-		AO353_21010	0.45	+1.2
4,592,459	+		AO353_21010	0.48	+0.0
4,592,587	+		AO353_21010	0.60	-1.2
4,592,587	+		AO353_21010	0.60	+0.2
4,592,587	+		AO353_21010	0.60	-1.2
4,592,587	+		AO353_21010	0.60	-0.8
4,592,587	+		AO353_21010	0.60	-0.8
4,592,588	-		AO353_21010	0.60	+1.8
4,592,588	-		AO353_21010	0.60	+0.2
4,592,588	-		AO353_21010	0.60	+1.2
4,592,588	-		AO353_21010	0.60	-1.2
4,592,588	-		AO353_21010	0.60	+0.6
4,592,588	-		AO353_21010	0.60	+0.8
4,592,902	+				-0.5
4,592,902	+				+0.1
4,592,902	+				+0.3
4,592,902	+				-0.6
4,592,902	+				+0.8
4,592,903	-				-0.8
4,592,903	-				+0.8
4,592,903	-				-1.1
4,592,903	-				+1.2
4,592,920	+				-0.2
4,592,929	-				-1.8
4,593,074	+				-0.2
4,593,074	+				+2.1
4,593,075	-				-1.1
4,593,075	-				-1.9
4,593,075	-				+2.8
4,593,075	-				+0.2
4,593,150	-				-0.8
4,593,162	+				-0.2
4,593,162	+				-0.2
4,593,163	-				+0.8
4,593,210	+				-1.5
4,593,210	+				-1.0
4,593,210	+				-2.6
4,593,210	+				+0.1
4,593,210	+				-0.4
4,593,210	+				-0.2
4,593,211	-				-0.8
4,593,211	-				-1.5
4,593,211	-				-0.2
4,593,211	-				+1.0
4,593,211	-				+1.4
4,593,211	-				-0.4
4,593,449	+		AO353_21015	0.26	+0.8
4,593,449	+		AO353_21015	0.26	+1.4
4,593,450	-		AO353_21015	0.26	+1.6
4,593,450	-		AO353_21015	0.26	+1.2
4,593,450	-				+2.4
4,593,450	-		AO353_21015	0.26	-0.1
4,593,450	-		AO353_21015	0.26	+1.6
4,593,450	-		AO353_21015	0.26	+1.4
4,593,450	-		AO353_21015	0.26	+0.0
4,593,450	-		AO353_21015	0.26	-0.2
4,593,450	-		AO353_21015	0.26	+0.4
4,593,450	-		AO353_21015	0.26	+0.6
4,593,450	-		AO353_21015	0.26	-0.2
4,593,450	-		AO353_21015	0.26	+1.5
4,593,450	-		AO353_21015	0.26	+0.6
4,593,451	+		AO353_21015	0.26	+0.6
4,593,451	+		AO353_21015	0.26	+0.3
4,593,451	+		AO353_21015	0.26	-0.8
4,593,452	-		AO353_21015	0.27	+0.1
4,593,486	+		AO353_21015	0.29	-0.8
4,593,486	+		AO353_21015	0.29	+1.1
4,593,610	+		AO353_21015	0.38	-0.5
4,593,611	-		AO353_21015	0.38	+0.8
4,593,611	-		AO353_21015	0.38	-0.2
4,593,777	-		AO353_21015	0.51	+1.4
4,593,777	-		AO353_21015	0.51	-0.5
4,593,777	-		AO353_21015	0.51	-3.0
4,593,810	+		AO353_21015	0.53	+0.7
4,593,810	+		AO353_21015	0.53	-0.2
4,593,810	+		AO353_21015	0.53	-0.2
4,593,811	-		AO353_21015	0.53	-1.2
4,593,811	-		AO353_21015	0.53	-0.2
4,593,811	-		AO353_21015	0.53	+1.3
4,593,811	-		AO353_21015	0.53	-1.5
4,593,811	-		AO353_21015	0.53	-0.2
4,593,811	-		AO353_21015	0.53	+0.4
4,593,870	+		AO353_21015	0.58	+0.6
4,593,870	+		AO353_21015	0.58	+0.8
4,593,870	+		AO353_21015	0.58	-0.4
4,593,871	-		AO353_21015	0.58	+0.1
4,593,871	-		AO353_21015	0.58	+0.4
4,593,871	-		AO353_21015	0.58	+0.8
4,593,871	-		AO353_21015	0.58	+0.2
4,593,871	-		AO353_21015	0.58	-0.2
4,593,871	-		AO353_21015	0.58	+1.3
4,593,882	+		AO353_21015	0.59	+1.4
4,593,882	+		AO353_21015	0.59	-1.5
4,593,883	-		AO353_21015	0.59	+0.8
4,593,883	-		AO353_21015	0.59	-1.2
4,593,883	-		AO353_21015	0.59	-1.2
4,593,883	-		AO353_21015	0.59	-0.8
4,593,883	-		AO353_21015	0.59	-0.6
4,593,885	+		AO353_21015	0.59	-2.0
4,593,885	+		AO353_21015	0.59	-0.1
4,593,885	+		AO353_21015	0.59	+2.0
4,593,885	+		AO353_21015	0.59	-1.2